Petromyzon marinus (sea lamprey): 116939114
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Entry
116939114 CDS
T09614
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116939114
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmrn02000
]
116939114
Transporters [BR:
pmrn02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116939114
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
116939114
NCBI-ProteinID:
XP_032802967
UniProt:
A0AAJ7SR31
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Position
5:complement(11397104..11427701)
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AA seq
737 aa
AA seq
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MEESLSPLRATAWEVPLTAGGASETEPSSGHTNGARSLLLLCSHDKNGPLVQAKTSLHPS
MSAGHLNNQQQYTELARNEGLAPSDQYWVGDLGERALRDSQDAKPSSDSEEVARSCDSGG
AGGGGDSGGGGGGGGDAGGGGGGEGKAVAEVVGSEQSASCNSAPDGNPHEKTLVVHGPEE
ANERDTWSKKMDFLLSVIGFAVDLGNVWRFPYVCYQNGGGAFLIPYCLMAVFGGIPLFYM
ELALGQFHRNGAISIWRRICPIFKGVGFAICIINFYVAFYYNTIIAWALYYLYSSFTSTL
PWTKCDNPWNTVNCTSYFDTTGVAWGKHSRSPAEEFYTRNVLEIQYSKGLGGVGGLRWQL
LLCLFLIFTIVYFSLWKGVKTSGKVVWVTATFPYVVLFILLIRGATLPGAWRGVLFYLKP
NWKKLLTTEVWVDAAAQIFFSLGPGFGVLLALASYNKFNNNCYRDALVTSSVNCFTSFMS
GFVIFTVLGYMAEMRNVEVEDVAKDMGPSLLFITYPEAIANMMGSTFWAILFFMMMITLG
LDSTFGGLEAIITAVMDEYPSLFSKRREYFVLGLVTICFMGALSTLTYGGAYIVKLLEEF
GSGCSIIGIVLLEAIAVSWFYGVKRFCADIHSMLGFSPGYFWRLCWVAISPLFLSFIVVS
FLTGSKPLKLFDYDFPDWSMILGYFIAASSFMFVPLYMAYKILITPGTLKQRLYASIKPE
ESGIARSQEQLRMTVIP
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagcttgtctccgctgagggccaccgcgtgggaggtgccgctcactgcagga
ggagcgagcgagaccgagcccagcagcggtcacaccaacggcgcacggagcctcctgctc
ctctgctcgcacgacaagaacggacccctggtgcaagccaagacctcgctgcacccgtcc
atgagcgcaggtcacctcaacaaccagcagcagtacacagagctggccagaaacgagggc
ttggccccgagcgaccaatactgggtgggggatttgggagagcgcgccttgcgagacagc
caagacgcgaagccctcgtcagacagcgaagaggtggcccggagctgcgacagtggagga
gcagggggaggtggagatagtggcggcggcggcggtggtggtggtgatgcaggaggagga
ggcggcggggaaggcaaagcagtggccgaggtcgtgggctccgagcagtcggcgtcgtgc
aactcggctccagacggcaacccgcacgagaagacgctcgtggtgcacggcccagaggag
gcgaacgagagggacacgtggagcaagaaaatggactttctgctgtccgtcatcggcttc
gcggtggacctgggcaacgtgtggcgattcccgtacgtctgctaccagaacggaggcggg
gcattcctgatcccctactgcctgatggccgtgttcggaggcatccccctcttttacatg
gagctcgccctgggacagttccatcgaaacggagctatttccatctggcgccgcatctgc
cccatcttcaaaggtgtgggctttgccatctgcatcattaacttttacgtcgccttctac
tacaacaccatcatcgcctgggccctctactacctctactcctcgttcacgtccacgctg
ccctggaccaaatgcgataacccgtggaacacggtcaactgcacgagctacttcgacacg
accggggtggcctggggcaagcactcgcgctcccctgccgaggagttttacactcgcaac
gtgctggagattcagtactcgaaagggctcggcggtgtgggcgggctcaggtggcagctc
ctcctctgcctcttcctcatcttcaccattgtttactttagcctctggaaaggagtgaaa
acctcgggcaaggtggtgtgggtgacggccaccttcccctacgtggtgctcttcatcctg
ctcattcgaggcgccaccctgcccggggcatggagaggagtcctcttctacctcaaacca
aactggaagaagctgctgactacagaggtgtgggttgatgctgctgctcaaatcttcttc
tccctggggccaggctttggagtgctcctcgccctggcgagttacaataagttcaacaac
aactgctaccgggatgcgttggtcaccagctccgtaaactgcttcaccagcttcatgtca
ggctttgtaatcttcaccgtgctgggctacatggctgagatgaggaatgtggaagttgag
gacgttgccaaagacatgggacccagcctgctgttcataacatatccggaagctattgct
aatatgatggggtccacgttctgggccatcctcttcttcatgatgatgatcactttgggg
ctagatagcacgttcggtggtctggaggccatcatcacagctgtcatggacgaatacccc
agcctcttctccaaacgcagggagtacttcgtgctgggcctggttacgatctgtttcatg
ggtgccctctccacgctcacctacggtggggcgtacatcgtgaaactgctggaggagttc
gggtcaggatgctccatcattggtattgtcctgctggaggccatcgccgtgtcctggttc
tatggcgtgaagcgtttctgcgccgacatccactccatgctgggcttctcgcccggctac
ttctggcggctgtgctgggtggccatcagccccctcttcctctccttcatcgttgtcagt
tttctgacgggatccaagccgctcaagctgtttgactatgacttccctgactggagcatg
atcctgggctactttatcgcagcatcgtccttcatgttcgtaccgttgtacatggcttac
aaaatcctgatcacgcctggtaccctcaagcagaggctgtacgcgagcatcaagcccgaa
gagagcggaatcgccaggtcccaagagcaactcaggatgactgttatcccgtga
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