Petromyzon marinus (sea lamprey): 116939188
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Entry
116939188 CDS
T09614
Name
(RefSeq) nuclear receptor corepressor 1-like isoform X1
KO
K06065
nuclear receptor co-repressor 2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116939188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116939188
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
116939188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
GPS2_interact
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
116939188
NCBI-ProteinID:
XP_032803182
UniProt:
A0AAJ7WNP1
LinkDB
All DBs
Position
5:15850862..16033504
Genome browser
AA seq
2682 aa
AA seq
DB search
MSVPGGVTTGAASAAAPSPGVDVRRLPPTQPKPALTYAGAHQPVKVEVADYRVPQHQDFG
AFHAGMARPQPGRRRPSLLPEFHLNLDWSPDQRGRFEEPPYFSPVEGDLGVKRPRIDMGL
EACYPCPEPFHGRSEHPARQVEVKENVAALSLKVEPVSPAEEPPDDTDAPPSRLTKEDLL
HNMERVDREISKVEQQIAKLRQKQVHRRPAAAMESTCATMHEMVEEAAAAAAKPPKPEQN
ISPVPAEAKHRSIVQIIYEENRMRAESAHKILERLGPKVELPLYKQPSDTNQYHENIQTN
LTMRNKLIMYFKRRNQQRKVKEQFLSERYGQLLQAWEKRVERIESNPRRRAKDVRTRDYY
EKQFPEIRKQREQKEKGQRRNQKGNGSADGSDEEAADTGDDLSDQEGSEKQMRDLAAVPP
RLFDVDQRHVRFIDKNGLLGDPVRVHRERQLLNVWTEHEKEIFRDKFVLHPKNFSLIASY
LEKKTVSDCVLYYYLTKKNENYKGLVKKSYGRRRGRNTIPRSHPEERDDKEELKLEKEEK
DDKEAGKDSKEDPKSSIREREEGGEEAGEEREAAPSRRRKTANSQGRRKGRVTRSTANEQ
SGEESPVSSGGGGGGGVVQPASEPSTQSAAVSEAAEVCRWTEEEMEVAKKGLLEHGRSWP
AIARMVATKTEAQCKNFYFNNKRRYNLDDLVEQHRLQTSDGSQDREASCVGGESGSSSTS
GAHEQEHDGESDGAGNQSSDTESAPSPRPPGGGSAKPTSQAGPSAEWAPGAATPGDVPSL
AVKSEKDGTGEDVGPRDEHRRVKVEEEEDDEEEEEAGEGGGDAKKDASKEVVLAAAAAAA
GHRDGEVKPEGSARAERKKGGGTGERRRGRDRDRQRAEGASEDDSSATCSADEMDVDGDE
SRQRLLGPSAKSGVASPNKLALSGVGGVAQDLQHMVQRAAEIPAMLPISYLPGAIGAGGS
QDAWALYQQKIINEYKDPSKAGPKDLTKPSPQAASPHIPHSSVPPGLQPVPQQASPTGME
PPRPTLWRPPRASNIPSPPPLIPSSKPHGVAGSITQGTPVNYPPPVPGLLAPYQAAGGGG
LGGPSPKGSISMGLPRHAEPVKHATPDRSIAKGTSGPKVLPDSNYRGSITQGIPADALYR
IHHPNLRGDDDVIYSGVVQKAPEVSKPPSGYLEVSAGAKRSYDMMEGRSSAATQYEGLIS
RAAMKDESGLRPAKDRPTAHGSIIQGTPRSVMDAQEEYAQREGRSVDVRTQWATSMEVPG
TRERNQDAARALHESQASMHVRRTHYDGSISQGTPMRMDPGELRHDVRSLIASPTRAARP
DPAADSRSERHREQPDSRRQDDNRRPYDLSRHRPADTGAQSSRRTPVSGYPGSISHTSPS
GGTHAESSAQASGRTPVSGYPGSIAHASPSSSHAENLQASARAAMGYPGSISRGSPVIVR
DSSSAKHSEAGQSAGRPSPHERKPNSTPREKSQTPTPERQSVAQNPYEYPVIRGPTPDIH
RGALSLSLEQALHSGLLIDPTAYYLHRQMQGAYFLPRHMAPVPGYPSYPFFHLPGYPENP
ALDNTRQTILNDYITSQQMGLPRGMSQRDQTLPPHFSPFMRTGIIDLSQMPAHPMLVGTL
GAAAAGASGLERLAYIPGGPMPFDSRAYAAAVSATQGSLPHMVQPSARGDEREKERERDR
ERESRAQPVQERSPSRKQQASEAARPIGGVQPSIRTSASPPPSPRQRGNVIQSPSAHGQG
GKSVITLAETHAAAYSRQRSPSTGSYANYPVASSTQRHGDIMSGVASGAGDPGAHKHTAG
FAPRQPDVDGMGFRPPHDVHRHRDRRTAADEGRRDPGLYGKQQQQHHQQQQQHQQQHQQQ
HQQQHQQQHQQQQQQAASIDLTKHAEGTRQVDAGLTFSDQKSRSIISSPVAKSAAQHHQQ
HQQHHQHQSHAPKQPQLTNVSPHQYGTSGPQHFPPLSQAAVPPQLVSSAQPVVSASPPHF
KVAGGGSGGGAGSDTSKPVNHQAVAAAAVVAAAAAAATAEREEAPENPLFLLSRELKTRG
RATMTAANFIHAIITHQISGDKDRQEGSSPLNLDSTSTEICETHNPAGLRCDPEVAVQQI
ESAPSSGSERSMTNSPGASPSHAHEKAGGRKAHAAAQAEKSQFSTDERREPTSQAETNPC
ANATSKPHSSTHRVITLADHIHEIITLDYTRNVGPYPLHASQRSPRQSPPEAHSTVGGSG
GPPPLARGQDSLPVPPPKPRAGEPSPPELTAEQLPSSLPSSLPSSLPLRAVPKLADDSSP
KSSSRMRKSPDESQDSPSGSEGGLEPASPPTSASSGSEQHDKPPPAGNATAPAPAHKEPV
PEHSAARTSSSARGASRPDPRGLAYSPAFFSKLTENTSAMVKSKKQEIYLKSTSTRDVGA
GQPGTEIFQMPATPVSDPTNNLGLEDIIRKALMGSFEDSSTGSKGMGPHMSPVPPGPPAP
STLESRQDSDSRASPLSGSGRQKSGGAKPSSRSKASRSPAYTERPPSAPSEGRGPAASPA
RSETTPVGPLPEQQQQQDKRRAPSASPARGDGAERRTPGAQPPAWDDKVTGATATTTASA
ASTTASALSSAAAAQFPFNPLMLMMGGGGAGAAGAAGGGGGGGGGNGTGASPPSAQTPVQ
AVLAPATGGAASPTSQQQRSWDREKLTPLLSSQYETLSDSDG
NT seq
8049 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtaccgggcggtgtgacgacgggagccgccagcgccgccgcgccgtcacccggg
gttgatgtccggcgcttgccgcccacgcagcccaagccggcactgacgtacgccggtgcc
caccaacctgtgaaggttgaagtggccgactaccgcgtaccgcagcaccaggactttggc
gctttccacgccgggatggcgcgcccccaacccgggcgccggagaccgtccctgctaccg
gagttccacctcaacctcgactggtcgccggatcaaaggggccggttcgaagagccgccc
tatttttctccggtggagggagacctcggggtgaagcggccacgcatagacatggggctg
gaggcttgttacccctgccctgagccgttccacggccgctcggagcatcccgcccgccag
gtcgaggtgaaagagaacgtagcggcactcagcctgaaggtggagccggtgtctccggcg
gaggagcctccggacgacacggacgctccgcccagtcgcctgaccaaggaggacctgctg
cacaacatggagcgcgtggaccgcgagatcagcaaggtggagcagcagatcgccaagctg
cgccagaagcaggttcatagaagacctgcagccgctatggagtctacgtgtgccacgatg
catgagatggtggaggaggcagcagcagcagcagccaaaccccctaagccagaacaaaac
atctccccggtgcccgcggaagccaaacatcgcagcatcgtgcagatcatttacgaagag
aacagaatgagagccgaatctgcacacaagatcctggagagactgggacccaaagtggag
ctgccgctgtataagcaaccgtctgacacaaaccagtaccatgagaacatccaaacaaac
ctcaccatgaggaacaagctcatcatgtatttcaagagacgaaatcagcagcgcaaggtg
aaggagcagttcctgtcagagcgctacgggcagctgctgcaggcgtgggagaagcgcgta
gaacgcatcgagagcaacccgcggcgacgcgccaaggacgtccgcacgcgcgactactat
gagaagcagttccccgagatccgcaagcagcgcgagcagaaggagaaggggcagaggcgc
aaccaaaagggaaacggatcggctgacggcagcgacgaggaggctgctgacaccggcgac
gacctgtctgaccaagagggcagcgagaagcagatgcgcgacctggcggccgtgcctccg
aggctgttcgacgtcgaccagcgacacgtgcgcttcatcgacaagaacggtctcctgggc
gaccccgtgcgcgtgcaccgcgagcggcagctgctcaacgtgtggaccgagcacgagaag
gagatcttccgagacaaatttgttttgcatccaaagaatttttcgttgattgcgtcctac
ctggaaaagaagaccgtctccgactgtgtcctgtactactacttgaccaagaaaaatgag
aactacaaggggctggtgaagaagagttacgggcgccggaggggaaggaacacgattccc
cgctcacatccagaagagcgcgatgacaaggaagagctgaagctggaaaaggaggaaaag
gatgacaaggaagccggcaaggattctaaggaagacccaaaaagcagcatcagagagcgg
gaggaaggcggggaggaggccggggaggagcgagaagccgcgccgtcccgccgacgcaag
accgccaatagccagggtcgccggaaagggcgagtgacgcgctcgacggccaatgagcag
agtggggaggagtctcccgtgagcagcggcggcggcggcggtggtggagtcgtccagcca
gcaagcgagcccagcacccagtcagctgctgtctcggaagctgcagaagtttgccgttgg
accgaagaagagatggaagttgccaaaaaagggctgctggagcatggacgcagctggccc
gcaatcgcgcgcatggtcgccaccaagacggaagcgcagtgcaagaacttttacttcaac
aacaagcgaagatacaacctggacgacttggttgagcagcaccgcttgcagacgtcggac
gggtcccaggatcgcgaggcgtcgtgcgtgggaggcgagagtggctcctccagcacctct
ggggctcacgagcaggagcacgacggcgagagcgatggcgccggcaaccagagctcggac
actgagagcgctccgtcgccacggcctcctggtggcggctccgccaaacccacttctcaa
gccggcccgtcagcagaatgggcccccggtgctgcgaccccgggtgacgtgccgtctctg
gccgtgaagtcggagaaggacggcaccggcgaggacgtgggacctcgcgacgagcaccgc
cgtgtcaaggtggaggaggaggaggatgacgaggaggaggaggaggccggggaaggtggt
ggcgacgccaagaaagacgcttccaaagaggtggtgctggcggcggcggcggcggcggcg
gggcaccgcgacggcgaggtgaagcccgaaggcagcgcccgggccgagcgcaagaaggga
ggtggcacgggcgagcgcaggagaggccgcgacagggacaggcagagggccgagggcgcc
tcggaggacgattccagcgccacctgcagcgccgacgagatggatgtcgatggcgacgag
tcgaggcaaaggctgcttggccccagcgcgaagtccggcgttgcgtcgccgaataaattg
gcgttgagcggagtgggcggcgtggcgcaggacctgcagcacatggtgcagagagcagcg
gagatcccggccatgctcccgatatcgtacctgcccggagcaattggggcaggcggcagc
caggatgcctgggcgctttatcagcagaaaatcatcaacgaatacaaagatccgagcaaa
gcgggacccaaggacctcacgaaacccagccctcaggcggcgtcgccgcacatcccgcat
tccagcgtcccaccagggttgcagccggtgcctcagcaggcgtcgccaaccggcatggag
cctccgagacccacgctgtggaggcctccccgtgcctccaacatcccctcgccgcccccg
ctcatcccctcgtccaagccgcacggtgtggccggctccatcacacagggcacgccggtg
aactacccgccaccggtgcccgggctgctggcgccttaccaagcggccggcggcggaggt
ctcggcggccccagccccaaaggctccatctccatggggttgccgcggcacgccgagccg
gtcaagcatgcgaccccggacaggagtatcgcaaaggggacgtctggaccaaaggtcctc
ccagactccaactacagagggtccataactcagggcatccccgcagatgcgctctacagg
attcaccatcccaacttgcggggcgatgacgatgtcatatattctggtgtcgtgcagaag
gctcccgaggtgtccaaaccgccctcgggttacctggaggtgtccgccggagccaaacgc
tcctatgacatgatggagggtcgctcgtcggctgccacccagtacgaaggtttgataagt
cgcgctgcgatgaaggacgagagtggcctgcgtcccgctaaggaccggccgactgcgcac
ggatccatcattcaaggcaccccacggagcgtgatggacgcccaagaggagtacgcccaa
agggagggcaggtcggtggatgtgaggactcagtgggccacgtccatggaggtgcccggc
accagggagcggaaccaggatgccgcgagggctctgcacgagagccaagcgtcgatgcac
gtcagaagaacgcactacgatggttccatctcgcagggcacgccgatgagaatggacccg
ggcgagctgaggcacgacgttcgctcgctcatcgcgagcccgacccgggccgcccggccc
gaccccgccgccgactcgcgctcagagagacaccgcgagcagcccgactcccgccggcag
gatgacaaccgcaggccgtacgacctgagccggcaccgccccgccgacactggcgcgcag
tcgtctcgccggacgcccgtcagcggctacccgggttccatttcccacacgagcccgagc
ggcggcacgcacgccgagagcagcgcgcaggcatccgggaggacacccgtcagcggctac
ccgggatccatcgctcacgcgagccccagcagctctcacgcggagaacctgcaggcatcc
gcaagggcggctatgggctaccccgggtccatctcgaggggctcaccggtcatcgttcgc
gactcctcgtccgccaaacactcagaagccgggcagtcggcaggccgtccttcgccgcac
gagaggaagccgaactcgacgccgcgcgagaaatcccaaacgccgacgccggagaggcag
tcagtggcacagaacccgtacgagtaccctgtgatccgaggccccaccccggatatccac
cgtggagcactatccctgagcctggagcaggccctgcacagcgggctcctcatcgacccc
acagcgtattacctgcaccggcaaatgcagggcgcgtacttcctgccgcggcacatggcc
cccgttcccgggtacccgtcctacccattctttcacctgcctggctacccggagaaccct
gcgttggacaacacgcggcagacgatcctcaacgactacatcacatcgcagcagatgggc
ttgccgcgcggcatgtcgcagcgcgaccaaaccctgcccccgcacttctcgcccttcatg
aggacaggcatcatcgacctgtcgcagatgcctgcgcaccccatgctggtggggacgctg
ggggcagccgcggcaggagcctcgggcctcgaacgcttggcctacatccccggtgggccg
atgcccttcgactcgcgggcctacgccgccgccgtttccgccacgcaaggctcattgcct
cacatggtccagccttcggcccggggtgacgagagggagaaggagagggagcgagacagg
gagagggaaagcagagctcagccggtgcaggagcgctccccgtctcgcaaacaacaggcg
tcggaggcggcccggccgatcggtggggtgcagccgtcgatccggacgtcggcgtcgccg
cccccttccccgaggcagaggggcaacgtgatccagtctccctcggcgcacggccagggc
gggaagagcgtcatcacgctcgccgagactcacgccgccgcgtactcgcggcagaggtca
ccgtccaccgggagctacgcgaattaccccgtcgcctccagcacgcagcggcacggcgac
atcatgagcggcgttgccagcggcgcgggagatcccggggcgcataaacacacggccggc
ttcgcgccgcggcagcccgacgtggacgggatgggcttcaggcccccgcacgacgtgcac
cggcatcgcgaccgcaggaccgcggccgacgagggcaggagagacccgggcctttacggg
aaacagcagcagcagcaccatcagcagcagcagcagcaccagcagcagcaccagcagcag
caccagcagcagcaccagcagcagcaccagcagcagcagcaacaggcggcgagcatagac
ctcacaaagcatgcggaaggcacgaggcaagtcgatgccggcctgacattctccgatcag
aaatcgcgctccatcatcagctccccggtggcaaaatccgccgcacagcaccaccagcag
caccagcagcaccaccagcatcagtcgcacgctcccaagcagccgcagctcacgaacgtt
tcgccgcaccagtacggcactagcggaccgcagcacttcccgccgttgagccaggcagcg
gtgccaccgcagctggtgtccagcgcccagcccgtcgtttcggcaagcccgccgcacttc
aaagtagccggtggcggcagtggtggcggtgcgggcagtgacacgtccaagccggtgaac
caccaggcggtggcggcggctgcggtggtggcggcggcggcggcagcggccacggcggag
agggaggaggcgccagagaacccgctgttcctcctgagccgagagctgaagacgcgaggg
cgggcgacgatgacggccgccaacttcatccacgccatcatcacgcaccagatctcgggg
gacaaggaccggcaggagggcagcagccccctcaacctcgactccaccagcaccgagatt
tgtgaaactcacaatcccgctggactgagatgtgacccggaggtggcagtacagcaaata
gagtcggctccgtcgagcggatcggagcgcagtatgaccaacagcccaggcgcctctccc
tcgcacgctcacgagaaggcgggtggacgcaaggcgcacgccgctgcccaggccgagaag
agtcaattttccacggacgagcggagagagccgacatcgcaagccgagaccaacccctgc
gccaacgcgacgagcaagcctcactcgtcgacgcaccgcgtcatcaccctggccgaccac
atccacgagatcatcactctggactacacaaggaacgtgggcccctaccctctgcatgca
tctcagcgtagccctcggcagtcgcccccagaggcgcacagcactgtcggcggcagcggg
gggccacccccgctcgccaggggccaggattcgctgccagtgccgcccccgaaaccgagg
gcaggggagcccagccccccggagttgacagcggagcaactgccctcctcgctgccctcc
tcgctgccctcctcgctgcccctgcgagccgtgcccaagctcgccgacgactcgtcgccg
aaatcgtcctcccggatgaggaagtccccggacgagagccaggactccccgtcgggctcg
gagggcggcctggagccggcgtctccgcccacgagcgccagcagcggttcggagcagcac
gacaagcctcctcccgccggcaacgccacggcgccggcgccggcacacaaggagccggtg
cccgaacacagtgctgctcggacctcttcctctgcgcgtggcgcgagcaggcccgacccc
cgagggctggcctactctcccgccttcttcagcaagctgacggagaacacgtcggcgatg
gtgaagtcgaagaagcaggagatctacctcaaatccacgtcaacgcgcgacgtcggagcc
gggcagcctggcacagaaatatttcagatgcccgcaacccccgtttcagatccaaccaac
aacctgggccttgaggacatcatcaggaaggcgttgatgggaagcttcgaggactcgagc
acaggcagcaagggaatgggcccccacatgtcccccgtgccacccggaccacccgccccc
tctaccctggagtcccgtcaggactccgacagccgagcgtcgcccctctccggctcgggc
cgacaaaagtccggcggcgccaagccgtcgtcgcgcagcaaggcgtcccgctcgccggcc
tacacagagcggcccccgtcggccccgtcggagggacgcgggcccgcggcctcgcccgcc
cgctccgagacgacgcccgtggggccgctgccggagcagcagcagcagcaggacaagagg
cgggcgccgtcggcgtcgccggcgaggggcgacggcgccgagcggcgcacgcccggcgct
cagcctccggcctgggacgacaaggtgaccggcgcgaccgcgaccaccacggcgtcggct
gcatcgacgacggcatccgccttgtcctctgccgcggcggcacaatttcccttcaacccc
ttgatgctcatgatgggcggcggcggtgcaggtgcggcaggcgctgctggcggcggcggc
ggcggcggcggcggaaacggcacgggggccagccccccctcggcgcagactcccgtacaa
gccgtgctggccccagccactgggggtgccgcgtctccgacctcccaacagcagcgctcg
tgggaccgcgagaagctgacgccgctgctgtcctcccagtacgagactctgtccgatagc
gacggctga
DBGET
integrated database retrieval system
