Petromyzon marinus (sea lamprey): 116939202
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Entry
116939202 CDS
T09614
Symbol
FBXO38
Name
(RefSeq) F-box only protein 38
KO
K10313
F-box protein 38
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116939202 (FBXO38)
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116939202 (FBXO38)
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Gene cluster
GFIT
Motif
Pfam:
F-box
F-box-like
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
116939202
NCBI-ProteinID:
XP_032803224
UniProt:
A0AAJ7WMG9
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Position
5:complement(16763292..16780363)
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AA seq
892 aa
AA seq
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MTRCRSLRSAVCSGGERERMVTGNKRHGLAAAAATTQTTDPLDLLALLSHEILCKIFAHL
SLREVVSMQTLCRKLRDAATLFLRVTPSLDLCGGRWWTYMPAGLTDGPLLSLMSHTPALV
WCYGLHPYSVNPRRTRVGDTLSIPGITQALQACPRLAGVETSHLQVAEAIWKYLPHVEIL
GKFRNRNGGFPIPRENTLCVPSGARVQALHLVGVSIPELPSIPSLVSLHLKWVRFTNQQP
FINFHCPNLTSFTMSNCAGPTSSPRYVALVTALAAARRLTHLELVRVPFPGGIFQHNVED
NIRSGAFRALECIVFGACKYALEIDLGYLAIASAQSLEEVRMQPYLSKDCVFTALKMAAM
SFPQMEELHLGHTDDFHMQTWYTPDELVELGLADVSESPCTLTDLGVNMAGEVFPTLKHL
SLYNCPHLHLPQSWVTNLAPWRNLTELTLTKCHAVRLASLAGLVERLGNLMYLTLQDMFR
ELPRGCARVNLSAGTGIDLLANNNNHHDNRVPAEQPPPPPPPHQLPNFAGAEHVRNVAAA
AAAAAPPPRNGRDDDGGGGGGGGGDAADDDAAPAAAGAAAARGANDNDDALFAWNMEVAV
AAGQGDNAPAPPPAGRRHMVTRRMAQQSGRLFAGASGRGRDGRGLGRSTVTPDCSQVLKL
RSSSLLGVTLLACGLSDLSFVSCPRLQFVQASRCPVLCRVSLGAASEGTSRLVVSRCRHM
SPVDLMVTALRLPATADRYLCFTILTHMALIEIEKEAFACKRASYLVVLHTFSDIPDVRT
NTFVCERMEALAKAHRELLQLQGLSKPANTKPLQNCPKSGKRIFQGKLEGVNYRLATDFP
WLQFVKLEDVNPSCAIPEGVREKVLGKLLGRMHFPTHMVVAVLQHGVPAEDD
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgactcggtgtcgctctctaagatcagctgtttgtagtggtggagagcgtgaaaggatg
gtcaccggtaataagcggcatggccttgccgcagcagcggccacgacgcagacgacggat
cccctcgacctgctggctcttctctcacacgagatcctgtgcaagatattcgcgcacctc
tccctgcgcgaggtggtctccatgcagacgctgtgccgcaagctgagggatgccgccact
ctcttcctgcgcgtcacgccgtcattggacctgtgcgggggccggtggtggacgtacatg
cctgccggattgacagatggccctctgttgtcccttatgtctcacaccccggcattggtg
tggtgttacggcctgcacccctacagtgtgaatccacgtcggacgcgtgtgggggatact
ctcagcatacccgggataacgcaggctctgcaggcctgccctcgccttgctggcgtggaa
acctcccacctccaggttgccgaggcaatctggaagtatctgccgcatgtggagattttg
ggaaaatttcggaaccggaatggaggttttccaattccaagagaaaacacgctgtgtgtg
ccaagtggagccagggttcaagcactgcatctcgtgggagtgtccataccagagctgcct
tcaattccctctctggtctccctgcacctcaagtgggttcgcttcactaaccagcagccc
ttcataaacttccactgccccaacctcacttccttcacgatgagcaactgtgcaggcccc
accagctccccacgctacgtcgcgctggtaacggctctcgccgccgctcgccgcctcact
cacttggagctggtccgcgtgccgtttcccggcgggattttccagcacaacgtggaggac
aacatccgttcaggtgcgttccgtgcattggagtgcatcgtgtttggagcctgcaagtac
gccctggagattgacctgggatacctggccatcgcctctgcacagagcctggaagaggtg
cggatgcagccgtacttgagcaaggattgtgtgttcaccgccctgaagatggccgcgatg
tccttccctcagatggaggagctgcacttgggccacacagatgacttccatatgcagacg
tggtatacgcccgacgagctggtggaactgggattggctgacgtgtccgagtctccgtgc
accctcaccgacctgggagtgaacatggccggagaggtgtttcccaccctcaagcacctg
agcctctacaactgcccccacctccatttgccgcagagctgggtgacaaatttggctcct
tggcgcaacctgacggagctgacgctgaccaagtgccacgcagtgcgattggcctcactc
gccggcctcgtggagcgtctgggcaatctcatgtacctcaccctccaggacatgttcaga
gagctacccaggggctgcgctcgcgtcaacctgagcgcgggcacaggcatcgacctgctc
gccaacaacaacaaccaccacgacaatcgcgtgcccgctgagcaaccgccgccgccaccg
ccgccgcaccagctgcccaacttcgcgggagcggagcacgtgaggaacgtggcggccgcc
gccgccgctgccgcccctccccctcgcaacggcagggacgacgacggtggcggcggcggc
ggcggcggcggggacgccgctgacgatgacgcggcgccggcggcggcaggggcggccgcg
gcgcgcggcgctaacgacaacgatgacgctctcttcgcttggaacatggaggtggccgta
gcggcggggcaaggcgacaacgcgccggcgccgccgcctgctggcaggaggcacatggtc
accaggaggatggcacagcagtccggccgtctgttcgcgggtgcctcggggagagggcga
gatgggcggggtcttggtaggagcacagtcacgccggactgctcacaggtgctgaagctg
cgatcctcttccctgctcggggtcacactgttggcctgcgggctgtccgacctcagcttt
gtcagctgtcctcgcctgcagttcgtgcaagcgtcgcggtgccccgtgctgtgccgcgtg
tcgctgggagccgcgagcgagggcacgtcgcgcctcgtcgtgtcccgctgccgccacatg
tctcccgttgacctgatggtcacagcgctgcggctccctgccaccgccgatcgctacctg
tgcttcaccatcctgactcacatggccctgatcgaaatcgagaaggaggcgtttgcgtgc
aagcgtgcctcctacctggtcgtgctgcacacgttcagcgacattcctgacgtgcgcaca
aatacatttgtgtgcgagcgcatggaggccctggccaaggcgcacagggagctgctgcag
ttgcagggtttgtcgaaacctgcaaatacgaaacctctgcagaattgtccaaagagtgga
aagcgcatcttccaaggcaaattggagggcgtaaactaccggctagcgacagactttccc
tggctacaatttgtgaagttggaagatgtcaaccctagctgtgccatcccagaaggcgtg
cgtgagaaagtgctgggcaagcttctgggccggatgcacttccccacacacatggtggtg
gctgtcctgcagcacggagtcccggctgaagatgactga
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