Petromyzon marinus (sea lamprey): 116939219
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Entry
116939219 CDS
T09614
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116939219 (TFIP11)
Spliceosome [BR:
pmrn03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
116939219 (TFIP11)
Other components
Complex C specific factors
116939219 (TFIP11)
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
betaPIX_CC
Motif
Other DBs
NCBI-GeneID:
116939219
NCBI-ProteinID:
XP_032803253
UniProt:
A0AAJ7SRE0
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All DBs
Position
5:complement(17264965..17278012)
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AA seq
881 aa
AA seq
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MSMSHLYGRDEDVNVERFEVTDWDLENEFNPERVRHRQSKEEAVYGVWAEDDDDDDERPG
FSGGRSKNRDFTAPVSFVSGGVKRPAAEEEEDEDEDEEGVSGKGSGGEEDGARLGPWTEA
LQRAKGGRGARQSQKGGIRPSRTVAGLPPEKGFGSWERHTKGIGQKLLQKMGYVPGLGLG
KNAQGIVLPVEAKVRKGRGAIGAHGPERTKQSLHDFPAPKSDEEEEEEFKQQLSQWRKEP
GTGAGATKKGPRYTYRTVEELKAKGLGRKVAPPSQLSQVKVIDLTGKSQKVYYSYDQMSQ
RHSVPSDEAEAAEGETAAPSESKRKGFALPELEHNLQLLVELTEQDIVQTDRRLRHEKNQ
VVALQHEAQRLEALLEQEDRAVERLGRVLAVAESCERRARSLEGDVPPGEGEPPLGLADA
ARVFRSLQSEFYEEYRAFDLATLAVLTVQPLLKQSFAGWDPLKDPSFGLDVAREWKAILE
ESQNVLQTVHPQLGPLAGSSGGGGGTNMDPYHRLMWDTWMPCVRSAVVRWQPRACEPMVD
MVEHWMEFLPPWILNNVLEQLIFPKLQREVENWNPLTDTVPIHAWIHPWLPLMGGARLEP
LYSPIRSKLGSALQRWHPSDPSAKLILRPWKEVFSPGSWEAFMLKHILPKLGMCLSDFVI
NPHQQHLDPFRWVIDWEGMLSPASLVTLLDKHFFAKWLQVLCAWLSNNPNYEEIIKWYQG
WKSLFSEQLLAHVTVKEKFSEALDIMNRAVSMPHGPVGFTQPGAREHIAYLTQTERRRDF
QPDGGPAPPPASAVPPGPPGPAGGLAVGVAQPVPLSFKELVQARAEENNIVFMPLLGRRH
EGKQLYTFGRQVAYIDRGVVFVQGEKTWVPTSLQSLVDSAK
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgcacttgtacgggcgcgacgaggacgtgaacgtggagcgtttcgaggtg
accgactgggacctggagaacgagttcaaccccgagcgtgtgcgccaccgccagagcaag
gaggaggccgtgtacggggtctgggctgaggacgacgacgatgacgacgagaggcccgga
ttctcgggcgggaggagcaagaaccgcgacttcacggcccccgtgagctttgtgagcggc
ggcgtgaagcgtcctgccgccgaggaagaggaggatgaggatgaggacgaggagggggtc
tcgggcaagggctccggcggcgaggaggacggcgcccgtctggggccctggaccgaggcg
ctgcagagggcgaagggtgggcgcggcgccaggcagtcccagaaggggggcatcaggcct
tcccgtaccgtggccggactgccccctgagaagggcttcggcagctgggagcgacacacg
aagggcattgggcaaaagctgctgcagaagatgggctacgtccccggccttggactgggc
aagaatgcgcagggcatcgtcttgccggtggaagccaaggtccgcaagggccgaggagcg
atcggagcgcacggtccggagcgcaccaaacagtcactccatgatttcccggctcccaag
tccgacgaggaggaagaggaggagttcaagcagcagctgagccagtggcggaaggagccc
ggcaccggagccggcgcaaccaagaagggtccacggtacacctaccgcaccgtggaggag
ctcaaggctaaggggctgggccgcaaggtggcgccaccctcacagctcagccaagtcaag
gtaatcgacctgactggcaagagccagaaggtttactacagctacgatcagatgagccag
cgccacagcgttccgtcagacgaggccgaggccgcggagggagaaaccgcggcgccgagc
gagagcaagcgcaagggattcgccctgccggagctggagcacaacctccagctgcttgtg
gagctcacggagcaggacattgtgcagaccgaccgtcggctgcgccacgagaagaaccag
gtggtggctctgcagcacgaagcccagcggctggaggcgctgctggagcaggaggaccgc
gccgtggagcggctgggccgcgtgctggccgtggccgagtcctgcgagcgccgcgcccgc
tcgctcgagggggacgtgccgccgggggagggggagccgccgctcggcctcgccgacgcg
gcccgggtcttccgctcgctgcagagcgaattctacgaggaataccgcgccttcgacctc
gccacgctcgccgtgctcaccgtgcagccactcctcaagcagagctttgccgggtgggac
cccctcaaggacccgtcgttcggcctggacgtggcacgcgagtggaaggccatcctggag
gagagccagaacgtgctgcagaccgtccacccacagctgggcccgctcgccggcagcagc
ggcggcggcggcggcaccaacatggacccctaccaccgcctcatgtgggacacgtggatg
ccgtgcgtgcgttccgccgtggtgcggtggcagccgcgtgcctgcgagcccatggtggat
atggtggagcactggatggagttcctgccgccctggattctcaacaacgtcctggagcag
cttatcttccccaaacttcagcgcgaggtggaaaactggaacccgctgacagacacggtg
cccatccacgcgtggatccacccgtggctgcccctgatgggcggcgctcgcctagagccg
ctctactcgcccatccggagcaagctgggcagcgccctgcagcgctggcatcccagcgac
ccttccgccaaactcatcctgcggccgtggaaggaggtgttctccccgggcagctgggag
gctttcatgctcaagcacatcctgccaaaactcggcatgtgtctctcggacttcgtgatt
aaccctcaccagcagcacctggaccccttccgctgggtgatcgactgggaagggatgctg
tctcccgccagcctcgtcacgctgctcgacaaacatttctttgccaagtggctccaggtg
ctatgcgcgtggctcagcaacaaccccaactacgaggagataatcaagtggtaccagggc
tggaagtcactcttctcggagcagctgctggcgcacgtcaccgtcaaggagaagttcagc
gaggcgctggacatcatgaatcgcgccgtctccatgccgcacggacccgtgggcttcacg
cagcccggcgcacgcgagcacatcgcctacctcacccagaccgagcgccggcgagacttc
cagcccgacgggggccccgcgccccctccggcctcggcggtccccccgggcccgccgggc
cccgccggcggcctggccgtgggcgtcgctcagccggtgccgctgagcttcaaggagctg
gtgcaggcgcgcgccgaggagaacaacatcgtgttcatgccgctgctgggccggcgccac
gagggcaagcagctgtacacgtttgggcgccaggtggcatacatcgaccggggcgtcgtc
ttcgtgcagggagagaagacgtgggtgcccacgtcgctacagagccttgtcgacagcgcc
aagtga
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