Petromyzon marinus (sea lamprey): 116939261
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Entry
116939261 CDS
T09614
Symbol
CHD1L
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116939261 (CHD1L)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116939261 (CHD1L)
BRITE hierarchy
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
LIG3_BRCT
DEAD
BRCT
Motif
Other DBs
NCBI-GeneID:
116939261
NCBI-ProteinID:
XP_032803349
EnsemblRapid:
ENSPMAG00000036439
LinkDB
All DBs
Position
5:complement(18056056..18060868)
Genome browser
AA seq
1097 aa
AA seq
DB search
MSAPAHGEQQLGSTRGGGLVLRAYQMEGVEWLRRCREGRHGAILADEMGLGKTCQTIAFL
LSLVRRDRVDRPFLILAPLSVTHNWQDEMKRMCRRSDLHDEEERGGGGGGSDDDEEDEEI
SVIVYLGDIEKRGKLQEKIKSGAFHILLTTYELCLKDAAFLGRLPWSVLVVDEGHRLKSQ
SSLLHQALLEFDIGQRVLLTGTPVQNNLAELYSLLSFVATGTFAPEGLRAFVQRFAGVSS
DPERASELGDLLGPFVLRRLKTEVAAELPAKTELVLYHGVSAMQKQYYRAILSRDLDALE
DPTTGARVRLMNILMQLRKCVDHPYLFNGAEPEPFVEGEHLVSASGKLLLLDRILALLRR
EGHRALVFSQMTRMLDILQDFLEFRGYSYERLDGSVRGEERHLAIKSFGQKDIFVFLLST
RAGGVGLNLTAADTVIFVDSDFNPQNDAQAAARAHRIGQTRPVKVIRLIGRSTVEEVIYR
RAEAKLRLTHAVTAQMREDSDSNDMKDESPKQLSEILLAGLGTLMESDEGSSVEMDLQAI
LGESRDGCWVIEEPPAEGADAPPRRGAVRRQTEDDRRILESADYLRAPASSSDLAALSLL
RQDMNSRAGGPGGSSQSSAALALPVQRKRSPLTEQERAKRKERRQQLDRERDRALAVKRA
RMDIERQRKKLALWKEAGYESLNVALRGEGAASDDASESDEDVEGGASDEEEDEEGEGGQ
IRYVLGDVTLPDAPAGRNAIVVHCVDNSGRWGHGGLFSALDKRSTQPKHRYARAGKMGDL
ALGDAHLIPVDDRVSRAGGVDTLALIVAQSRDPNNVLSGISLAALETGLRRVRRAARRLR
ASVHLPRIGHATPGFNWYATERLVRKHLVSRGVPTYIYYHPRRTRQGAAASTARPSSTSK
PAASASSAASASSAASASSAASTSSAASAQTATQSAATHKPGPSVSACVKPASAAALSPS
SSSSSSRPPPPSSSPSLAAGPGDPNAAGSLSGPSDSWSLGFPDFMAGVRAHFLGLPAAEA
ARLARYLVTFDGDVSAGVDADTTHVVTAGREPGPGDAETLREAVRRRPDLTVVTAAWLRT
CFSARKKLPCAPFAVDV
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccccggcacacggcgagcagcagctcggctccacacggggggggggcctggtg
ctgcgcgcctaccagatggagggggtcgagtggctgcggcgctgccgcgaggggcggcac
ggggcgatcctggcggacgagatgggcctgggcaagacgtgccagaccatcgccttcctg
ctgtccctcgtgcgtcgcgaccgcgtcgaccggccgttcctcatcctcgcgccgctctcc
gtgacgcacaactggcaggacgagatgaagaggatgtgccggcggtcagaccttcacgac
gaggaggagaggggtggaggaggtggtggtagcgacgacgacgaggaggatgaggagatc
tccgtaatcgtgtacttgggggacatcgagaaacggggcaagctgcaggagaagatcaaa
tcgggagcgttccacatcctgctcaccacctacgagctgtgcctcaaggacgcggccttc
ctcgggaggctgccgtggtccgtcctggtggtggacgagggccaccgcctcaagtcgcag
agctccctgctgcaccaggcgctgctcgagttcgacatcgggcagcgcgtcctcctcacg
ggcacgcccgtccagaacaacctggcggagctctactccctgctcagcttcgtggcgacg
ggcaccttcgcgcccgagggcctgcgggccttcgtgcagcgcttcgcgggcgtcagcagc
gaccccgagcgcgcctcggagctgggcgacctcctgggccccttcgtgctgcgccgcctc
aagacggaggtggcggccgagctgcccgcgaagacggagctggtgctctaccacggcgtg
tcggcgatgcagaagcagtactaccgcgccatcctgtcgcgcgacctcgacgccctggag
gaccccacgacgggagcgcgcgtcaggctcatgaacatcctcatgcagctgcgcaagtgc
gtcgaccacccctacctcttcaacggcgccgagcccgagcccttcgtggagggcgagcac
ctggtgagcgccagcggcaagctgctgctgctcgaccgcatcctggcgctgctgcgccgc
gagggccaccgcgcgctcgtcttctcgcagatgacgcgcatgctcgacatcctgcaggac
ttcctcgagtttcgcggctacagctacgagcgactggacggctccgtgcgcggcgaggag
cgccacctggccatcaagtcgttcggccagaaggacatcttcgtgttcctgctgagcacg
cgcgccggcggcgtcggcctgaacctcacggccgccgacaccgtcatcttcgtggacagc
gacttcaacccgcagaacgacgcgcaggcagccgcgcgggcccaccgcatcgggcagacg
cggccggtgaaggtgatccggctcatcgggcgcagcaccgtggaggaggtcatataccgg
cgggccgaggccaagctgcggctcacgcacgccgtgacggcgcagatgagggaggacagc
gattccaacgacatgaaggacgagtctccgaagcagctgtcggaaatcctgctggccggc
ctcgggaccctgatggagtcggacgagggctcgtccgtggagatggacctgcaggccatt
ctgggagagagccgcgacggatgctgggtcatcgaggagccgcccgcggaaggcgcggac
gctcctccgcgacggggcgccgtccgccggcagaccgaagacgaccggcgcattctggag
agcgcggattacttgagggcgcccgccagctcgtccgacctcgccgccctgtcgctgctg
cgtcaggatatgaacagccgggcgggcgggcccgggggttcgtcgcagagttcggcggcg
ctggccctgcccgtccagcgcaagcggtcgccgctcacggagcaagagcgagccaagagg
aaggagcggcgccagcagctggacagggagcgcgaccgcgccctggccgtgaagagagcc
cgcatggacatcgagcgtcagcgtaagaagctggcgctctggaaggaggccggctacgag
tcgctcaacgtggcgctgcgcggggagggagccgcatcggatgacgcgagcgaaagcgac
gaagacgtcgagggtggcgcttcggacgaggaggaggacgaagagggggagggggggcag
atccgctacgtcctgggcgacgtgacgctgcccgacgcccccgcggggcgcaacgccatc
gtggtgcactgcgtggacaactcgggccgctggggccacgggggcctcttctccgcgctc
gacaagaggtcgacgcagcccaagcaccgctacgcgcgcgccggcaagatgggagacctg
gcgctcggggacgcgcacctcattcccgtggatgaccgcgtgagccgcgccggcggcgtc
gacacgctggccctcatcgtggcccagagccgcgatccgaacaacgtcctgtcggggatc
tcgctggcggccctggagacgggcctgaggcgcgtgcggcgagcggcacgcaggctccgc
gccagcgtccacttgccgaggatcgggcacgcgacgccgggcttcaactggtacgccacg
gagaggctcgtccgcaagcacctggtgtcgcgcggcgtgcccacgtacatttactaccac
ccgaggaggactcgccaaggggccgccgcgtccaccgcccggccttcctccacatccaaa
cccgcggcctccgcctcatccgcggcctccgcctcatccgcggcctccgcctcatccgcg
gcctccacctcatccgcggcctccgcccaaacggcgacgcaatccgcagccacccacaag
ccgggccccagcgtgtccgcctgcgtcaaaccggcttcagctgccgccctctctccatcc
tcttcctcctcgtcgagccgtcctcctcctccgtcgtcgtcaccgtctctcgcggccggc
cccggcgacccgaacgcggccggttcactgtcggggccgtcggactcctggtcgctgggg
ttcccggacttcatggcgggggtgcgcgcccacttcctcgggctccccgcggcggaggcg
gcgcgcctcgcccgctacctcgtcacgttcgacggcgacgtgagcgccggcgtcgacgcc
gacaccacgcacgtggtgacggcgggccgggaacccggccccggcgacgccgagacgctg
cgggaggcggtgcgccggcggcccgacctcaccgtggtgacggccgcgtggctccggacc
tgcttctccgctcgcaagaagctgccctgcgctccgttcgccgttgacgtttaa
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