Petromyzon marinus (sea lamprey): 116939265
Help
Entry
116939265 CDS
T09614
Symbol
SLC47A1
Name
(RefSeq) multidrug and toxin extrusion protein 1
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmrn02000
]
116939265 (SLC47A1)
Transporters [BR:
pmrn02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
116939265 (SLC47A1)
BRITE hierarchy
Motif
Pfam:
MatE
DUF3927
Motif
Other DBs
NCBI-GeneID:
116939265
NCBI-ProteinID:
XP_032803354
EnsemblRapid:
ENSPMAG00000014604
LinkDB
All DBs
Position
5:17602829..17626535
Genome browser
AA seq
594 aa
AA seq
DB search
MGHPCGNLCGGGRCRALSRFVPVNWKNELREVAMLAVPVTVSSFLIFCISMVSTVFCGHL
GKIELDSVMLASAVINITAIAVGVGMSLACDTLMSQAFGAKNLHEVGVILQRGIIILMLS
CCPCWALFLNIRPFLLTIGQDPEVARLASLYVLICIPALPAIFLYQLESKYLQNQSITMP
QVYTGLLMNGLNALFNYIFIYVMDMGVPGSAVAYVISNYSQSILLFVYIRVRGLHRNTWA
GWSWDCLQNWGVFMRLALPSLVMVCMEWWAYEVGIFLTGVLGVLEQASQAVTYQLITITY
MIPLGLSVAVNVRVGNALGAGRPEQANNSAKVVMICIGFMELLNAVILVAGRHVVAYVFT
TAHDVIDMVAAIMPVCAAYQLFEGIVVVSGGILRGGGRQKVGAVANFMGYNVFSLPIGIS
LMFCTSLRVIGLWIGMLVGLVMLCIFMIFYVCQLDWKAMANEAQERSGIGVKPQNVEEQQ
DVDKDMNGLSGLPAEHDSSEMSPEVIVLPLNGIDSNADMEGLEELNAPRHLLPAITLRQL
LLRRSLAVLLSLAVLAAGITVRMMTQVEDSPARPTPFNSTVSSAVTEGSRLLPV
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgggtcacccctgcgggaatctgtgcggcggagggagatgcagggcgctctcccggttc
gttcccgtcaactggaagaacgaactccgggaggtggccatgctcgccgtgccagtgacc
gtgtccagcttcctcatcttctgcatcagcatggtgagcaccgttttctgcggccacctg
gggaagatcgagctggactccgtgatgctggcgtcggcggtgatcaacataacggcgatc
gccgtgggcgttgggatgtctctggcgtgcgacacgctcatgtcacaggcgttcggagcc
aagaacctgcacgaggtgggcgtgatcctgcagagaggcatcatcatcctcatgctctcc
tgctgcccctgctgggccctcttcctcaacatccgccccttcctgctcaccatcggccag
gaccccgaggtggcaaggctggcgagcctctacgtgctgatctgcatcccggctctgccc
gccatatttttataccagctagagagcaagtatcttcagaaccagagcatcacgatgcca
caggtgtacacgggcctgctgatgaatggcctcaacgcactcttcaactacatcttcatc
tacgttatggacatgggtgtaccgggctcggcggtggcgtacgtgatctccaactacagc
caatccatcttgctcttcgtctacatccgagtgagaggcctgcaccgcaacacctgggca
ggttggtcctgggactgcctgcagaactggggggtgttcatgcgtctggctctgcccagc
ctcgtcatggtgtgcatggagtggtgggcctacgaggtcggcatcttcctgaccggtgtt
ctcggagtgcttgagcaagcgtcccaggctgtcacctatcagctgatcaccatcacgtac
atgattccccttgggctctctgtggcggtgaacgttcgcgtcggaaatgctcttggcgct
gggcggccggagcaagccaataactctgccaaagtggtcatgatctgcatcggcttcatg
gagttgctgaacgccgtcatcctggtggcgggccgtcacgtcgtcgcctacgtgttcacc
actgcgcatgacgtcatcgacatggtggcggccatcatgccagtgtgcgccgcctatcag
ctcttcgaggggattgtggttgtgagcggcgggatcctgcgtggtggagggaggcagaag
gtcggtgccgtcgctaacttcatgggttacaacgtattctcccttcccatcggcatcagc
ctcatgttctgcacctcgctacgcgtcatcggtctctggatcggcatgctggtcggcctg
gtgatgctgtgcatcttcatgattttctacgtgtgccagttggactggaaggccatggcc
aatgaggcccaagagagatccggcattggggtgaaaccacagaatgtggaggagcaacag
gatgtcgacaaggatatgaacggactctcagggctacctgcagaacacgactccagcgaa
atgtcacccgaagtcattgtgctgcctttaaacggcatcgactcgaacgcggatatggag
ggactcgaggagctgaacgcacccagacatctgctgccggccatcaccctgcgccagctg
ctgctgcgccgttctctcgccgtgctgctgtcgctggcggtcctggcggccggcatcact
gtgaggatgatgacgcaggtggaggactcgccggcgcggccgacgccgttcaacagcacc
gtcagcagcgccgtcacggagggctcgcggttattaccggtgtag
DBGET
integrated database retrieval system
