Petromyzon marinus (sea lamprey): 116939334
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Entry
116939334 CDS
T09614
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03030
DNA replication
pmrn03410
Base excision repair
pmrn03420
Nucleotide excision repair
pmrn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116939334 (RFC2)
03410 Base excision repair
116939334 (RFC2)
03420 Nucleotide excision repair
116939334 (RFC2)
03430 Mismatch repair
116939334 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmrn03032
]
116939334 (RFC2)
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116939334 (RFC2)
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116939334 (RFC2)
DNA replication proteins [BR:
pmrn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116939334 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
116939334 (RFC2)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116939334 (RFC2)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116939334 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
116939334 (RFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_16
AAA_14
Mg_chelatase
Viral_helicase1
RCF1-5-like_lid
Rad17
AAA_24
AAA_11
RuvB_N
AAA_18
AAA_19
AAA_assoc_2
AAA_28
nSTAND3
MipZ
AAA_5
ABC_tran
AAA_30
AAA_25
MeaB
NTPase_1
AAA_23
SLFN-g3_helicase
FtsK_SpoIIIE
RNA_helicase
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
116939334
NCBI-ProteinID:
XP_032803449
UniProt:
A0AAJ7WMP2
LinkDB
All DBs
Position
6:complement(408851..417272)
Genome browser
AA seq
366 aa
AA seq
DB search
MEEERMETHSGDASEQPGTSGLAATPRSPGTAGDKEAAAGPGRVGYELPWVEKYRPLKLK
EIVGNEETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAVRDAVLELNAS
NDRGIDVVRNKIKMFAQQKVTLPRGRHKIIILDEADSMTDGAQQALRRTMEIYSKSTRFA
LACNASDKIIEPIQSRCAVLRYSRLTDSQVLSRLLEVCDHECVQRTDDGLEAIIFTAQGD
MRQALNNLQSTHTGFGYVNSENVFKVCDEPHPLLVKEMIGHCVSGNIDQAYKIMSHLWKL
GYSPEDIIGNIFRVCKTYAMAEYLKLEFLKEIGLTHMRIVEGVNSLLQMAGLLARLCNKT
VAPAAS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaacgcatggagacgcatagcggggacgcctctgagcagccggggacctcg
gggctggcggccacaccgcggtccccagggacagccggcgacaaggaggcggcggcggga
cccgggcgcgtgggatacgagctgccctgggtggaaaaatacagacctctcaaactcaag
gagattgtcggaaatgaggaaaccgtgagccgcctcgaggtgtttgccagggagggaaat
gttccaaacatcattattgctggcccccctggcacgggcaagacgaccagcatcttgtgc
ttggcacgggcactgctgggcccagcggtgcgggatgctgtgctggaactcaatgcctcc
aacgatcggggtatagacgtggtgcgtaacaagatcaagatgttcgcgcagcagaaagta
acactgcctcgtggccggcacaagatcatcatcctggatgaggctgatagcatgaccgac
ggagctcagcaggcactacggcgcaccatggagatctacagcaaaagcacacgcttcgct
cttgcgtgcaacgcctccgacaagatcattgaaccaatccagtcgcgctgtgcggtgctg
cggtattctcggctgacggacagccaggtgctgtcgcgcctgctggaagtgtgtgaccac
gagtgcgtgcagcgcacggacgacggcttggaggccatcatcttcacggcacagggcgac
atgaggcaggctctgaacaatttgcagtccacgcacactgggtttggatatgtcaacagt
gaaaatgttttcaaggtgtgtgatgagccacatcctctgttggtgaaggaaatgattggg
cactgtgtcagcggaaatatagaccaggcttacaagatcatgtcacatctgtggaagctg
gggtactcacccgaagacattatcggcaacatattcagggtttgcaagacctacgctatg
gctgaatacctcaagctggaattccttaaggagatcgggctgacgcacatgcgcatcgtg
gaaggtgtcaactcattgttacagatggctggactacttgctcgtctctgcaacaaaaca
gttgcccctgctgccagctga
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