Petromyzon marinus (sea lamprey): 116939357
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Entry
116939357 CDS
T09614
Name
(RefSeq) platelet-derived growth factor receptor alpha-like isoform X1
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04010
MAPK signaling pathway
pmrn04020
Calcium signaling pathway
pmrn04144
Endocytosis
pmrn04510
Focal adhesion
pmrn04540
Gap junction
pmrn04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116939357
04020 Calcium signaling pathway
116939357
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116939357
09144 Cellular community - eukaryotes
04510 Focal adhesion
116939357
04540 Gap junction
116939357
09142 Cell motility
04810 Regulation of actin cytoskeleton
116939357
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pmrn01001
]
116939357
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pmrn04090
]
116939357
Enzymes [BR:
pmrn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116939357
Protein kinases [BR:
pmrn01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
116939357
CD molecules [BR:
pmrn04090
]
Proteins
116939357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C1-set
Adeno_E3_CR1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
116939357
NCBI-ProteinID:
XP_032803488
UniProt:
A0AAJ7SQ02
LinkDB
All DBs
Position
6:complement(1310911..1363028)
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AA seq
1358 aa
AA seq
DB search
MKSSFCSAATDSCRLLLLCAFFDPTRSQTTRPAVDQPRRHSLLWISSRDMTFCLHILLAS
IILGCCALDLPHVIPNASEVTVEVGQRLAVKCEGSARVVWVEPRNVAVSTPPAATATSQT
EAIPEFGLFSTWLRIENATLQHNGVYTCQYHHEDMSRYDDADVTDGTEPQGATVRVYVQD
GRSLFKPSLSEHAQVVIVHAGDVATLPCLVTSPHTSVSLRHDAAATAAAATTPDSGSTAP
RPSATTHRNDVAAGESVTRQMQRGAQTLQHQTVTNQSTHSSNTPTDELKKQPLPNGNAAD
YAQNLEGKINGNAGLPYNVAASTGPSSNVTTVHLAESGGASFAAAVPSAGAPRRAVWYVP
GVGLRAFLLPGRYRCIARLEGRTQESEEYHVMVLAVSQLRPVVTSPRAVVLRGDTITVTC
TVTGNDIVMFTWRHPRMPVGEGTARTSVLERRVPGGMQIVHTLTVPLADELDAGVYTCMT
ENSYGQANESTHIAVLDKGFVRVRPHIGPDESAMLLSSPLYEVDVYAFPPPLAVFWTKDG
RRLFDKNKDRHQPNDQAPLARHRQEGKQPPKGGGPDHRRRKQTVGSGKTDDNLITSTRTG
TGRSDHQKVLDARSGRGSENDRPTAESRQAGGPFRRDRARESADKAAPDSQRDQEESRWK
RADGSSGDRGDSHANIGFEAVDPRNNHYRSWLGLSRVALSDEGLYSIVVENSDDNASYSF
YLSINVPAAITKLSDNAERGDDGWSGAHRVVCLARGSPKPRIEWFACSQQHSCTEPTHWT
LIYVSNGTAPAGLGSGLPADANSSRRDNPAVGFDYSNVNPDKEGISVQEWADPSKGISSS
TITFDPATLVTPTAVRCVATNPFQTDEQILSLLNTDSKVGLTALSVVLFLLVLSMALLIV
AIVICNRKPRYEVRWKVIEPLSPDGSEYTYVDPMQLLYDRRWEVPRSTLKFGRVLGCGAF
GKVVEASIQGTETPCVAVKMLKANSSTSERRAMMSELKIMSHLGAHLNIVNLLGACTVGG
PVYIITEFCCHGDLVNFLHRNKYAYLHWLKDAQQSLKRPAASSTCAESMYMDMRPGDDDN
YVRSEARVDRVVYTVVDGVYYMDTQRDDEPFYASCELGGASPLTSTDLLSCAYQVAQGMA
FLASKNCVHRDLAARNVLLANHRVVKICDFGLARDLEKDTNYISRGNTFLPVKWMAPESI
FDNVYTTLSDVWSYGVLLWEIFSLGGSPYPGMAIDAHFYGQLKAGLHMDKPEHATEDMFE
IMKACWALRASQRPTFSQLVKTVGKLLPPAYLQAYDKTSEQFCDRRNKIHNSVHTNVRVD
VSSTADPEDKTESDREGGLFYLQLKTEDAQPEWETSFL
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgaagagttcgttctgctcggcggccactgacagctgccgcctcctcctcctctgcgcg
ttcttcgatcccacgcgcagccaaacgacgcgtcccgcggtggatcagccacggcgtcac
tctttactttggatttcatcgcgagacatgacgttctgcctacatatattgctggcctcc
attattctgggctgctgtgctctggatcttccacacgtgatccccaacgcgagcgaggtg
accgtggaggtcgggcagaggctggccgtcaagtgtgagggctcggcccgcgtggtttgg
gtcgagcctcgaaacgtcgccgtctcaacgccgcccgcagccacagccacgtcgcagaca
gaagccatacctgaattcggcttgttttcaacttggctacgaattgagaatgcgacgctg
caacacaatggtgtgtacacgtgtcagtatcatcacgaagacatgagtcgatacgatgac
gctgacgtcactgatgggacagagccacaaggtgccactgtgagagtttatgtgcaagac
gggcgctcgctgttcaagccctcgctgagtgagcacgcgcaggtggtgattgtgcacgcc
ggggacgtggcgactctgccgtgcctcgtcacgtcgccacacacttcggtgtcgctccgt
cacgacgccgccgccaccgccgccgccgccaccacgcctgacagcggcagcacagcgcct
cgaccgtccgcaaccacgcacaggaacgacgtagcagccggagaaagcgtcacgcgccag
atgcaacgaggcgcccaaacgctacaacaccaaactgtaacgaaccaaagcacgcactcc
tcaaacacccccaccgatgaacttaaaaaacagcccctgcccaacggtaacgctgccgat
tacgcccaaaacctggaaggcaagatcaatggcaacgccgggctgccttacaatgttgcg
gcgagcacagggccctcttcgaacgtcaccaccgtccacctcgccgaatccggcggagcg
tcgttcgccgccgcggtgccgagcgcgggggccccacgccgggcagtgtggtacgtgccc
ggcgtgggcctgcgggcgttcctgctgcccgggcgctatcgctgcatcgcacgtctggag
gggcgcacgcaggagtcggaagagtaccacgtgatggtgctcgccgtctcacagctccgt
cccgtggtgacctcgccgcgtgccgtggtcctgcgtggcgacacaatcacggtcacgtgc
accgtgacgggcaacgacatcgtcatgttcacctggaggcaccctcgcatgccggtcggt
gagggcacagcgcgcacgagcgtgctggagaggcgcgttcccggcggcatgcagatcgtg
cacacgctgaccgtgccgctggccgacgagctcgacgccggcgtgtacacgtgcatgacc
gagaattcgtacggacaggcgaacgagagcacgcacatcgccgtgctggacaaggggttt
gtccgcgttcggcctcacataggccccgatgagtctgcaatgctcttgagctcgcccctg
tacgaggtggacgtctacgcattcccgcctccgctcgctgtcttctggaccaaagacggc
agacgcttgtttgacaagaacaaggaccgccatcagccgaacgatcaggctccgctcgct
cgtcaccgccaggaaggaaagcagccgcccaaaggcggcgggccggaccacaggcgtcgc
aagcaaacggtgggcagcggcaagacggacgataacctcataacgagcactcgcaccggc
accggccggagcgatcatcagaaagtgctggacgctcgatcagggaggggctcggagaac
gacaggccgactgctgagagtcggcaggctggaggtccgttccgtcgtgatcgagcaaga
gagagtgcggacaaagctgcgcctgacagtcaacgggaccaggaggagtcgcgctggaag
agggcagacggcagctctggcgatcgtggagacagccacgcaaacattggctttgaagct
gtagatccacggaataaccattaccgcagctggctgggtctcagccgggtggcgctaagc
gatgaaggcctctactctatcgtggtggagaacagcgatgacaatgccagctacagcttc
tacctgtccatcaatgtgccggcagccatcacgaagctgtcggacaacgcggagcggggc
gacgatggctggagcggagcgcaccgcgttgtgtgcctggcacggggctctcccaaacca
cgcatcgagtggtttgcctgtagccagcagcacagttgcacagaaccgactcattggacc
ttgatctacgtcagcaatggcacagctcctgcagggctaggctcaggcctgccagctgac
gcgaattcaagccgcagagacaacccagctgttggcttcgactacagcaacgtgaaccca
gacaaagagggcatatctgtgcaggagtgggccgatcccagcaaggggatcagcagcagc
acaatcaccttcgatcccgcgacattggtgaccccgactgctgtgcgctgcgtggccaca
aaccccttccaaaccgatgagcagatcctgtccctactgaacacggactccaaggtgggc
ctcacagcgctgtcggtggtgctgttcctcctcgtgctctccatggccctcctcatcgtt
gccattgtcatttgtaataggaaaccgcgttacgaggtgcggtggaaggttatcgagccg
ctgagcccagacgggagcgagtacacgtacgtggacccgatgcaactcctgtatgaccga
cgctgggaagttccccgaagcactctgaaatttggtcgagtcctgggttgtggcgctttt
ggtaaagtggttgaagcaagcatacagggcacggaaactccgtgcgtcgctgtcaaaatg
cttaaagccaactcgtccacgagtgaaaggcgagcgatgatgtctgagctgaagatcatg
agccacctgggcgcacatctcaacatcgtcaacctgttgggggcctgcactgtgggaggt
cctgtctacatcattaccgagttctgttgccacggtgatctggtgaacttcctgcacaga
aacaagtatgcgtaccttcactggttaaaggatgctcagcagtcgctcaagaggcctgca
gcaagctctacatgtgctgagagcatgtatatggatatgaggcccggagatgatgacaat
tacgtgcgttctgaagcacgtgtggaccgcgttgtatacacagtggtggatggggtctat
tatatggatacccaaagagatgacgaaccattctatgccagctgtgaacttggtggggcg
tcgcccctcacatctacagacctcctcagctgtgcctaccaggtggcacagggcatggcg
ttccttgcctctaaaaattgcgtacacagagacctggctgcccgtaacgtgctgctcgca
aaccaccgagtggtcaaaatttgtgactttggactggcgagagatctggagaaagacacc
aactacatatccaggggcaatacgttcctgccggtgaaatggatggcccccgagagcatc
tttgacaatgtgtacacaacactcagcgatgtgtggtcatacggtgtgctgctgtgggaa
atattctcgctcggaggcagtccttaccctggaatggcgattgatgcacacttttatggg
cagctgaaagctggacttcatatggacaagccagaacatgcgacagaagacatgtttgag
ataatgaaggcttgctgggcactcagagcatcccaaagacccacattctcccagctcgtg
aaaacagtgggaaagcttctaccaccggcatacttacaggcatatgataaaacgagcgag
cagttttgtgacagacgcaacaagatacacaacagtgtgcacacaaatgtgcgcgtggat
gtgagcagcacggcagatccagaggacaaaactgagtcggacagggaaggtggcttgttc
taccttcagctcaaaacggaagatgcacagcccgagtgggagaccagtttcctgtga
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