Petromyzon marinus (sea lamprey): 116939369 Help Entry 116939369         CDS       T09614                                  Name (RefSeq) thrombospondin-2-like isoform X1   KO K04659   thrombospondin 2/3/4/5 Organism pmrn  Petromyzon marinus (sea lamprey) Pathway pmrn04145   Phagosome pmrn04510   Focal adhesion pmrn04512   ECM-receptor interaction pmrn04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:pmrn00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     116939369  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     116939369   09144 Cellular community - eukaryotes    04510 Focal adhesion     116939369   09142 Cell motility    04820 Cytoskeleton in muscle cells     116939369  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pmrn04131]     116939369   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pmrn04147]     116939369    00536 Glycosaminoglycan binding proteins [BR:pmrn00536]     116939369 Membrane trafficking [BR:pmrn04131]  Endocytosis   Phagocytosis    Opsonins     116939369 Exosome [BR:pmrn04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    116939369   Exosomal proteins of colorectal cancer cells    116939369   Exosomal proteins of bladder cancer cells    116939369 Glycosaminoglycan binding proteins [BR:pmrn00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    116939369 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 TSP1_CCN TSP1_ADAMTS TSP1_CFP_C cEGF Laminin_G_3 EGF Motif Other DBs NCBI-GeneID:  116939369 NCBI-ProteinID:  XP_032803512 UniProt:  A0AAJ7WN25 LinkDB All DBs Position 6:1725818..1776071 Genome browser AA seq 1183 aa AA seqDB search MRQKRWTFLSLFVVFIPVMHGSDLGTEENPVFDLFEISKLNRRNSGVRLVRGPDPDSSAY RVVRPERIPAASDQQLQRLLGLMRDEEGFVFVASIQQDARTRGALVSVQPQDGASSARRF QIVSNGIANTLDLAYSVEGMQSVVSFEDVDLANGDWQNLTLHVSGEHARLFIGCDLVENI ILEGPFYEQLSGPQSRLYIAKGMVKDDDFKGSLQNMHFIFGMAVEELLRNRGCPLAAQPD GLVLAPLEQTELKSASSAIVNNILGQKMGKSLEPAGYCDYSCKDVTHMFSEMKGLRVIVS KLVDGIQNLSDENTKLHRSLGITEKGMCWHDGRVYENHAEWTVDSCFSCTCQDSKTMCRQ LSCSPVACMNAVVLEGECCPTCITVDKGEGWSPWSEWTECSVSCGTGSQQRGRSCDRISS TCEGPSIQIRKCHTKSCDKRVKRDGGWSHWSPWSSCSVSCGDGVSTRIRLCNSPVPVLGG RECNGQGRENVPCNKEPCPIDGNWGPWTLWSPCPVSCGGGLREHTRLCNNPEPQFNGKKC VGDGRETDICNKEECPIDGCLSSPCFTGVECTSFPDGSWQCGPCPAGFRGNGAECLDINE CEEVKDICFNLNGIHRCENTAPGFHCQPCPARYGGNQPFGVGLSDAKRAKQTCEPRNPCK DGTHNCHKHAKCIHLGQFAEPPFKCECRTGYAGNGVICGEDTDLDGWPNYNLTCVVNATY HCRKDNCPHLPNSGQEDYDKDNMGDACDDDDDNDGILDDRDNCRLQFNPRQYDYDRDDVG DRCDNCPYNHNPGQIDTDGNGEGDACSVDIDGDGILNEQDNCPYIYNVDQKDTDKDGVGD MCDNCPLEHNPEQMDTDSDLIGDKCDNNQDIDEDGHQNNLDNCPYVPNSNQADHDKDGKG DACDWDDDNDGIPDDKDNCRLVPNPDQLDSDGDGRGDACKYDFDNDGIPDIEDNCPENAA IFQTDLRKFQVVPLDPKGTAQIDPNWAVRHQGKELVQTVNSDPGMAIGYDEFNGVDFSGT LFVNTELDDDYAGFVFGYQSSGRFYVVMWKQVTQTYWQNKPTVAHGYAGLQIKVVNSSTG PSENLRNALWHTGDTPGQVRTLWHDPKVIGWKDFTAYRWHLVHRPKTGFIRVVMHEGKQV LADSGPIYDKTFAGGRLGLFVFSQEMIYFSDLKYGCKGEASMS NT seq 3552 nt NT seq  +upstreamnt  +downstreamnt atgcggcagaagagatggacattcctgagccttttcgtagtatttatccccgtgatgcac ggttcagacctgggcacggaggagaaccccgtctttgacctgttcgagatcagcaagctc aaccgcaggaacagcggggtgcggctggtgcggggccccgacccggacagctccgcgtac cgcgtggtgcgccccgagcgcatccccgccgcctcggaccagcagctgcagcgcctgctg gggctcatgcgggacgaggagggcttcgtgttcgtcgcctccatccagcaggatgcgcgc acccgcggcgccctcgtgagcgtccagccgcaggacggggcctcgtcggcgcgccgcttt cagatcgtctccaacgggatcgccaacaccctggacctcgcctactccgtggagggcatg cagagcgtcgtctcgtttgaggacgtggacctggccaacggcgactggcagaacctgacc ctgcacgtgagcggcgagcacgccaggctcttcatcggctgcgacctcgtcgagaacatc atcctggagggccccttctacgagcagctgtccggcccgcagagccgtctctacatcgcc aagggcatggtcaaggatgacgacttcaagggctcgcttcagaacatgcacttcatcttt ggcatggccgtggaggagcttctccgcaacagaggatgtccactcgctgcccagcccgat ggcctggtccttgctcccttggaacagactgaacttaagagtgcgagttctgccattgtc aacaacatattgggccagaagatgggcaagtcgttggagccagctggctactgtgactac tcgtgcaaggatgttacacacatgttttccgagatgaagggactccgtgtcatagtgagc aaacttgtggatggcatccagaatctgagtgatgagaatacgaagctgcaccgcagtctg ggcatcacagagaagggcatgtgctggcacgatggacgagtctacgagaaccacgccgag tggacggtggacagctgcttctcctgcacttgccaggactccaagaccatgtgtcgccag ttgtcctgctctcctgttgcctgcatgaatgccgtcgtgctggagggagagtgttgccca acctgcataacggtcgacaaaggcgagggctggtccccgtggtcggagtggaccgagtgc tccgtgtcgtgcggcacgggctcccagcagagaggccgctcttgcgaccgcatcagcagc acatgcgaggggccctccatccagattcgcaagtgccacaccaagagctgcgacaagagg gtgaaacgtgacggcggctggagccactggtcaccctggtcgtcgtgctccgtgtcgtgt ggcgacggcgtctccacgcgcatccgtctctgcaattctcccgtccctgtgctgggcggc cgcgagtgcaacgggcagggccgcgaaaacgtcccctgcaacaaggagccctgcccgatc gacgggaactggggaccctggactctctggtcaccgtgccctgtgtcgtgtggcgggggt ctccgtgagcacacgcgcctctgcaacaaccccgagccacagttcaacggcaagaaatgt gtgggagacggacgcgagacggacatctgcaacaaggaagaatgccccatcgatggctgc ctttccagcccgtgcttcacgggcgtcgaatgcacgagtttcccagatggctcatggcag tgtggcccctgtcccgctggcttccgtgggaacggagcagaatgtcttgacattaacgag tgtgaagaggtgaaggacatctgcttcaatctgaacgggatccatcgctgtgagaacaca gcacccgggtttcactgccaaccctgcccggcgcgctacggtggaaaccagcccttcggc gtgggactgtctgatgccaagcgagcaaagcagacgtgcgagcccagaaacccctgcaag gatggcactcacaactgccataagcacgccaagtgcatccacctgggccagtttgcagag cctccgttcaagtgtgagtgccgcacgggctacgctggaaacggggtcatttgtggagag gacaccgaccttgacggctggcccaactacaacctgacttgcgtggtcaatgccacttat cactgtcgcaaggacaattgcccacacctgcctaactcgggtcaggaggactatgacaag gacaacatgggtgacgcctgtgacgatgacgatgacaacgatggaattctcgatgacagg gacaactgccgactgcagttcaacccgaggcagtacgactacgaccgcgatgacgtggga gaccgctgtgacaactgcccgtacaaccacaacccggggcagatcgacacggacgggaat ggggagggggacgcctgctctgtggacatcgatggagacggtattctaaatgaacaagac aactgtccttatatttataacgtggaccagaaggacacggacaaggatggcgttggcgac atgtgcgacaattgtccgctggagcacaacccagagcagatggacacagactctgacctc attggagataagtgtgataacaatcaggacattgatgaggatggccatcagaacaatttg gacaactgcccctatgtaccaaactcgaatcaggctgaccatgacaaagatggcaaaggt gacgcttgtgactgggatgatgacaacgatggaattcccgacgacaaggacaactgtcga ctcgtgccaaaccctgaccaactcgactctgatggtgatgggcgaggcgacgcctgcaaa tatgactttgacaacgacggaataccggacattgaggacaactgccccgagaatgcggct attttccagacagacctgcgaaagttccaggtggttcctctcgaccccaagggcacagct cagatcgacccgaactgggcggtgcgccaccagggcaaggagctcgtgcagacggtcaac agcgacccagggatggccatcgggtacgacgagttcaacggcgtagacttcagcggcact ttatttgtgaacaccgagctcgacgacgactacgcgggcttcgtgttcggctaccagtcg agcggccgcttctacgtcgtcatgtggaaacaggtgacgcagacgtactggcagaacaag ccgacggtggcgcacggctacgccggcctgcagatcaaggtcgtcaactcgtccacggga ccgagcgagaaccttcgcaacgcgctctggcacacgggggacacccctggacaggtgcgc actctgtggcacgaccctaaggtgatcggctggaaagacttcacagcctacaggtggcat cttgtccacagacccaagactggctttatcagggttgtgatgcacgagggaaagcaggtg ttggctgactcgggacccatctatgacaagacgtttgcgggtggtcggctcgggctcttt gtgttctcccaggagatgatttacttttcagacctgaagtacggctgcaaaggtgaggct tctatgagttaa

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