Petromyzon marinus (sea lamprey): 116939381
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Entry
116939381 CDS
T09614
Symbol
PSMC1
Name
(RefSeq) 26S proteasome regulatory subunit 4
KO
K03062
26S proteasome regulatory subunit T2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
116939381 (PSMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pmrn03051
]
116939381 (PSMC1)
Proteasome [BR:
pmrn03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
116939381 (PSMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_22
AAA_2
DUF815
nSTAND3
AAA_16
AAA_5
RuvB_N
AAA_28
AAA_25
AAA_14
ATPase
AAA_3
RNA_helicase
NPHP3_N
TIP49
Prot_ATP_ID_OB_N
NB-ARC
AAA_33
NACHT
IstB_IS21
Mg_chelatase
AAA_7
ABC_tran
AAA_24
Parvo_NS1
SLFN-g3_helicase
Zeta_toxin
TsaE
Motif
Other DBs
NCBI-GeneID:
116939381
NCBI-ProteinID:
XP_032803542
UniProt:
A0AAJ7WN36
LinkDB
All DBs
Position
6:2070022..2075824
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AA seq
440 aa
AA seq
DB search
MGQSQSGAPGSGGGKKDDKEKKKKYEPPVPTRVGKKKKKVKGPDAANKLPQVTPHTYCRL
KLLKLERIKDYLLMEEEFIRNQERLKPQEEKQEEERSKVDDLRGSPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVVGVLSDDTDPLVTVMKLEKAP
QESYADIGGLDAQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFSIHTSRMTLADDVTLEDLIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYRKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggggcagagccagtcaggagcgcccgggtccggtggtggaaagaaagatgacaaggag
aaaaagaagaagtatgagccaccagtgccaacgcgcgttggcaaaaagaagaagaaggtg
aaggggccagacgctgccaacaaacttccacaagtaactccacacacctactgccgcctg
aagttgctgaagctggaacgtatcaaggattacctcctcatggaggaggagttcatccgc
aatcaggaacgtctcaagccccaggaggagaagcaagaggaggagcggtcaaaggtggac
gacctccgtggttcacccatgtctgttggcacactggaggaaatcattgacgacaaccat
gccatcgtgtcgacttctgtgggctctgagcactacgtctccatcctttcctttgttgat
aaggacctgctggagcctggatgctctgtgctgctcaaccacaaggtgcacgctgtagtt
ggcgtgctgagcgatgacacagacccactggtgactgtcatgaagctggagaaggcacca
caggagtcgtatgctgacatcggagggctcgatgcacagattcaggagattaaggagtct
gtggagttgccactaacccacccggagtattacgaagagatgggcatcaaacctcccaag
ggagtcatcctgtatggcgcgcctggcacaggcaagacactgctggcaaaagcggtggcc
aaccagacatcggcgacattcctgcgcgttgtgggctctgagctcatacagaaatacctg
ggcgatggacccaagctggtccgtgagctgttccgtgtggccgaagagcacgcaccctct
atcgtcttcatcgatgagatcgacgccattggcaccaaaaggtatgactccaactctggc
ggcgagcgggaaatccagcgcaccatgttggagctcctcaaccagcttgacggcttcgac
tcgcgcggagacgtcaaagtcatcatggccaccaaccgcatagagacgctcgaccctgca
ctcattcgcccaggccgtatcgaccgtaagattgagtttcctctgccggatgagaagaca
aagcgccgtatcttctcaatacacacgagccgaatgaccttggcagatgacgtaaccttg
gaggacctcatcatgtccaaagatgacctctctggagcagacatcaaggccatttgtact
gaggctggactcatggccctgcgggagaggcgtatgaaggtgaccaatgaggacttcaag
aagtcaaaggagaatgtgctgtaccgcaagcaggaggggacccctgaggggctgtatctg
tga
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