Petromyzon marinus (sea lamprey): 116939424
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Entry
116939424 CDS
T09614
Symbol
EXO1
Name
(RefSeq) exonuclease 1
KO
K10746
exonuclease 1 [EC:3.1.-.-]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116939424 (EXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmrn03032
]
116939424 (EXO1)
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116939424 (EXO1)
DNA replication proteins [BR:
pmrn03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
116939424 (EXO1)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
116939424 (EXO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
116939424
NCBI-ProteinID:
XP_032803623
UniProt:
A0AAJ7SQ92
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Position
6:3969287..3978893
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AA seq
820 aa
AA seq
DB search
MGISGLLQFLKEASEPVNVSRYRGQTVAVDTYCWLHKGAFACADRLAKGEKTDQYVFYCV
KFIEMLLGCDVKPILVFDGCMLPSKKEVEKSRRERRQVNLQKGKQLLREGKVSEARACFT
RCINVTPQMALEVIKAARARGVDCIVAPYEADAQLAYLNRAGIAQAVITEDSDLLAFGCD
KVILKMDQSGNGVEISRSRLGRVTHLGNYFTEEKFRHMCILSGCDYLPSIPGIGLVKASK
VLKLSNNPNVVKVIRKMGHYLKMNVTVPEEYIEGFVRAENTFRYQLVFDPISRQLCPLNP
YPEDLDSSQLSYAGAWIDSSQALQIALGNIDINTMIKIDNFNPDISKPVAVKSHSWYRNS
RRVETNTHMLSIWDKRYRPAGKDGVSAGNGLSPVKAENQILPVRSGCMKGKERVIDMSFM
KSRKTDAASKRQRHDESQVLEMDLLEQYCFSGNKKMCKSSDVTDSLPLREGGVGSEQSCS
QQQQVKHSSNVSNHKSRFTRLLNRKDHQQEIVFTPGTRSRFFYPSKEEAQSPNLVKSLSP
SQTEVKSGKDQGQSETTVDQELTGSSNQSREVSSTLKETQCLTSSAQDEESPLSHFTENV
TMTESKIFSAQPRQVTATAFSWSGSTTRHAQESNSAIDRLSRFRRQPQEAVSTTNLPSTN
TLNPFAQMDQRCLQTRAAGDGGGNLSETEDGHEASLSSSPPSLPHASLQSPARGIIVTSP
AQDVPSCPPNQHFKGVGLSKAGKVLSGGIHSPHMFGQAKASGLSRKKPEKHKINSENMSQ
GSQPTLSNLWSNFQYKRGTENLMSTRSMLPLSPVKSNISL
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggggatctcggggcttctgcagttcctgaaggaggcgtcggagcccgtgaacgtgagc
cgctaccgcggacagaccgtggccgtggacacctactgctggctgcacaagggggccttc
gcgtgcgccgaccgcctggccaagggcgagaagactgaccagtatgtgttctactgcgtc
aagttcattgagatgctgctgggctgtgatgtgaaaccaatcctggtgtttgatggttgc
atgctgccctccaagaaagaagtggagaaatcgaggagagagaggcggcaggtgaaccta
cagaaaggcaagcagctgctgcgggaaggaaaagtgtcagaggcgcgtgcctgcttcaca
cgctgcatcaacgtcaccccacagatggctctagaggtcatcaaggcagcacgtgcccgg
ggtgtggactgcatcgtcgctccgtacgaggccgatgcacagcttgcctacttgaaccgg
gctgggatcgctcaagcagtcatcacagaagactccgatttgcttgcatttggatgtgac
aaggtaattctcaagatggatcagtcagggaatggagttgaaatttctcggtctcgactt
ggccgtgttacacacctgggcaattacttcacagaagagaagttccgccacatgtgcatt
ctctctggatgtgactacctgccctccattccaggcattggcttggtgaaagccagcaag
gtcctcaagttgtccaataaccccaatgtagtgaaggtaatccgaaaaatgggccattac
cttaagatgaatgtgactgtgccggaggagtacatcgagggatttgtacgtgctgagaac
accttccgctaccagctagtttttgacccgatatcccggcaactgtgtcccctcaaccca
tatcccgaggatcttgactccagccagctgtcctacgcaggggcatggatcgacagttct
caggccctgcagattgcactgggtaacatcgatatcaacaccatgatcaaaatagataac
ttcaatccagacataagcaagcctgttgctgtgaagagtcacagctggtatcgtaattca
cggcgtgtggaaactaatacacacatgctgagcatttgggacaaaagataccgccctgct
ggcaaggatggtgtttctgcaggcaatggcctttccccagtcaaagcagagaaccagata
cttccagtaaggagtggctgcatgaaagggaaggagagagtcattgatatgtctttcatg
aagtcacgcaagacagatgcggcttccaagaggcagaggcatgacgagtcacaggtgttg
gaaatggacctacttgaacagtattgcttttccggaaacaaaaaaatgtgcaaaagctca
gatgtaacagacagccttcccttgagagagggtggagttgggagtgaacaatcatgttct
cagcaacaacaagtgaagcacagctccaacgtttccaatcacaagagcaggttcacccgc
ctgttgaacaggaaggatcaccagcaagaaattgtgttcacacctggcacaagaagcagg
tttttctacccatcaaaagaagaagcacaatcaccaaacttggtaaaatcattatcgcca
agtcaaaccgaggtcaagtctggtaaagatcaaggacagtcagagacaacagttgatcaa
gaactaactggcagttcaaaccaatcaagagaagtgtcatcaaccttaaaggagacacaa
tgtctgacatcctcagcacaagatgaagagtcaccactttcacattttacagagaatgtc
acaatgacggaaagtaaaatattcagtgcacagccacggcaggtgactgcaactgccttc
agttggtccgggagcacgacaagacatgcacaagaaagcaactctgccatcgacagactt
agtcgttttagaaggcaaccacaggaagcagtttcaacaacgaacctaccaagcacaaat
acgttaaatccatttgctcaaatggatcaaagatgtttacagactcgggcagcaggagat
ggtggtggcaacctgagtgagactgaggatggccatgaggcctccctctcatcctcccca
ccatcattaccacatgccagcctccaatctcctgccagaggaattattgttacctctcct
gcacaggatgttccaagctgtccacccaatcagcattttaagggtgtggggctgtcgaag
gcaggcaaggtcctctctggaggcatccacagcccccacatgttcggccaggccaaggcc
agtggccttagccgcaaaaaacctgaaaagcacaaaatcaactctgagaacatgagccaa
ggctctcaaccaacgctcagcaacctctggagtaatttccaatataaaaggggaaccgag
aacctgatgtctacaagaagtatgcttcccctgtcgcccgtgaagagcaacatatctctt
taa
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