Petromyzon marinus (sea lamprey): 116939432
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Entry
116939432 CDS
T09614
Name
(RefSeq) zinc finger protein ubi-d4-like isoform X1
KO
K22198
zinc finger protein neuro-d4/cer-d4
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116939432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116939432
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116939432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHD_4
PHDvar_NSD
PHD_2
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
116939432
NCBI-ProteinID:
XP_032803641
UniProt:
A0AAJ7SRW7
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Position
6:complement(4886851..4901060)
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AA seq
432 aa
AA seq
DB search
MAAVVQNPLKALGDQFYREAIEHCHNYNARLCAERSVRLPFLDSQTGVAQNNCYIWMEKR
HRGPGPRSLSPNIFGVAPGQLYTYPARRWRKKRRLPPPEDPRLRITDIRPESEVPVKKDP
ECSSLEVLLRGDMTERKGVDTREDDSISEFQRVFDAEDYLDDLDDEDYEEDTPKRKPKSK
GRAKGKRVYKKQSERQVESPADEQDKGDMSCEAGNSGKAAAGTRKKNEAAAQEDKDKPYA
CDNSYKHKRSSKASDKVCGKRYKNRPGLSYHYTHSHLADEEGEDKDSRPATPVTRRSEDR
KAKKGPDGLANPNNYCDFCLGGSVENKKTGQPEELVSCSDCGRSGHPSCLQFTSNMIAAV
KTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLSPAMSEPPEGSWSCRLCLDL
LKEKASVYTNQS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtagtgcagaacccgctcaaggccctcggagaccagttctacagggaggcg
atagagcattgccacaactacaatgcacggctgtgtgctgagaggagtgtacggctgccc
ttcctggactcgcagacgggtgtcgcgcagaacaactgctacatctggatggagaagcgg
catcgtggacctggtccgcgcagcctctcccccaacatttttggcgttgcgccaggacag
ctctacacatacccagcacgccgctggcgcaagaagagacggcttccaccacccgaggat
ccacggctccgaataaccgatatcagaccagaaagcgaggtgcctgtgaagaaagaccca
gaatgctctagcctggaggtgctgctccgtggagacatgacggaacgcaaaggcgttgac
acccgggaagatgacagtatcagcgagttccagagagtctttgatgccgaagattatttg
gacgatttggacgatgaagattacgaagaggacacgcctaaacgcaagcccaagagcaaa
ggacgggcaaaagggaagcgtgtttataagaagcagtctgaaagacaagtggagagtcct
gctgatgagcaggacaagggtgatatgagctgtgaagcaggcaacagtggcaaggcagca
gctgggaccaggaagaagaatgaagcagcagcacaggaggataaagacaagccgtatgca
tgcgacaatagttacaaacacaaacgtagctcaaaagcgtctgataaagtttgcgggaag
cggtacaagaaccgtcctgggctgagctatcattacacgcacagccacttagcggatgag
gagggcgaggacaaggactcgcggcccgccacacctgtcacgcgccgctcggaggaccgc
aaagccaaaaaaggtcctgatgggctggcaaaccctaacaactactgcgatttttgtctg
ggcggctctgtggagaacaagaagacaggacaaccggaagaattggtttcctgttccgac
tgtggacgttctggacacccgtcttgcttgcagttcacttcaaacatgatcgccgccgtc
aagacttaccgttggcagtgcattgaatgcaagtgctgcaacatttgcggcacctctgag
aatgatgaccagctgctgttttgcgatgactgcgaccgtggttatcacatgtactgtctc
agccctgccatgtctgagcccccagagggaagctggagttgccgcctttgcctggacttg
ctcaaagaaaaggcatctgtctataccaaccagtcataa
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