Petromyzon marinus (sea lamprey): 116939531
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Entry
116939531 CDS
T09614
Name
(RefSeq) homeobox protein six1-like
KO
K15614
homeobox protein SIX1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116939531
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
116939531
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
116939531
NCBI-ProteinID:
XP_032803935
UniProt:
A0AAJ7SQZ5
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Position
6:9099716..9103034
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AA seq
344 aa
AA seq
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MSMLPSFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYMEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENTNSNSSGTAPTQLLSPLNGARSLLSSSDDEKSPDHTPDHGGVSPPLLL
QAPHHHHPHHQHHQSLSHQHHQHQALAQHQHQSHMSQHGGGALSYAGLPPNPGVPAPSGG
AGTGLQQQQQQQQQQQLHQHQQQQQHALQDSMMHSISSSLVNIG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgctgccttcgttcggcttcacgcaggagcaggtggcgtgcgtgtgcgaggtg
ctgcagcagggaggcaacatcgagcgcctgggacgcttcctgtggtcgctgcccgcttgc
gagcacctccacaagaacgagagcgtgctcaaagccaaggccgtggtggccttccaccgg
ggcaacttccgcgagctctacaagatcctggagagccaccaattttcgccgcacaaccac
cccaagctgcagcagctgtggctcaaggcgcactacatggaggcggagaagctgcgcggg
aggcccctgggcgccgtgggcaagtaccgggtgcggcgcaagttcccgctgccgaggacc
atctgggacggcgaggagacgagctactgcttcaaggagaagtctcggggcgtgctgcgc
gagtggtacgcgcacaacccgtacccgtccccgcgcgagaagcgggagctggccgaggcc
acggggttgaccacgacgcaggtcagcaactggttcaagaaccggcgacagcgcgaccgc
gccgcggaggccaaagagagggagaacagcgaaaacacaaacagcaactcgtccggaacg
gccccgacgcagctcctgtcgccgcttaacggagcccgaagcctcttgagcagctcggac
gacgagaagtcgcccgatcacacgcccgaccacggcggagttagccctcctcttctcctc
caggcgccacatcaccaccacccccatcaccagcaccaccagtcgctgagccaccagcac
caccagcaccaggctctggctcagcaccagcaccagagccacatgtctcagcacggcgga
ggagccctcagctacgccggtttgccacccaacccgggagtgccggccccgtcgggaggc
gcggggaccggcttgcagcagcagcagcagcaacagcagcagcagcaactccaccagcat
caacagcagcagcagcacgccctacaggactccatgatgcactccatctcgtctagcctc
gtcaacattggatag
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