Petromyzon marinus (sea lamprey): 116939554
Help
Entry
116939554 CDS
T09614
Symbol
LRFN5
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
116939554 (LRFN5)
Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
116939554 (LRFN5)
BRITE hierarchy
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
LRR_5
LRR_1
fn3
LRR_9
Ig_2
Shisa
C2-set_2
Sp38
Motif
Other DBs
NCBI-GeneID:
116939554
NCBI-ProteinID:
XP_032803985
EnsemblRapid:
ENSPMAG00000007618
LinkDB
All DBs
Position
6:complement(10445890..10474391)
Genome browser
AA seq
759 aa
AA seq
DB search
METAQLCFLVIGLVTASLGCPTHCICQNLSPSLSTVCAKIGLLFVPHNIDRRTVELRLGD
NFITSVRRQDFGNMTLMVDLTLSRNTISQIAPYAFADLSSLTFLHFDYNRLTHIGNKSFK
GLSNLRHLIISNNQLSDISVGAFDDFLMSLEDLDLAYNNLEKVPWEAIQKMTSLHTLSLD
HNMIDYIEAGTFSHLHKLARLDMTSNKLQKLPPDPLFTRLQLFANKGIHHTPPLVLNFGG
NPLHCNCELLWLRRLTREDDLETCASPQALVGKYFWSIPEEEFVCEPPLITRHTHRLLVL
EGQRATLKCKAIGDPDPWVHWISPDEKVISNTTRTVVHDNGTLEILVTTTKDDGTFTCIA
SNPAGESTTFVELSIIHLPHLSNITHNVHPEPDPGSSDITGSTKPAANAANNASDTKGFQ
NRRVAALDVTSNSAVIKWSASKMLPSVRMYQIQYNSSSDDTLMYRMLPSSSKSFVLNNLL
SGAMYDVCVMAIYDDVSTSLTATRLLGCIDFITEEEYIQCSSMPSQFIGGTMIIVIGGII
VASLLVFIIILMIRYKVCANPSAGKIPEVRSVYAPTREIQGFQGGQQHQFSCKLMVQEEG
QPSSSDSTRSQSSASCQPAPEGQDSNAPAPQCNVDEPAAHKRRRRTKCRPKRDPLGNVQR
DKPDNVSHSKHASLVLQTKQALLLHGWPEIALNKLARTPAISGPKRSLSLDIGMFAHTGK
PGTRPKRSISINGLVLLFQELDSIKNAQDQPEWMPESSV
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgcccagctctgtttcttggttattgggctggtgaccgcgtccctcggatgc
ccgacgcattgcatctgccagaacctgtcaccgtctctgagcactgtttgtgctaaaatt
gggctcctctttgtcccgcacaatatcgacagacggacggttgagctgcgcctgggggac
aacttcatcacgagcgtgcggaggcaagactttggcaacatgactctcatggtggatttg
actctctcccgaaacactatcagccaaatagccccttatgcatttgcagacctgagcagt
ttaaccttcttgcactttgactacaaccgtttgacccacattggaaacaaaagctttaaa
ggcctttccaacctcaggcacctgattataagcaacaaccagcttagtgacatatccgtt
ggagccttcgatgattttctgatgtccctggaagacctcgatttggcctacaacaactta
gagaaagttccctgggaagctattcaaaaaatgacatcgctgcacacactgagccttgat
cacaatatgattgattatattgaagccggcacattttcacatcttcacaagctcgccaga
ttggatatgacatcaaataagcttcaaaagcttcctccagatccactttttactcgcctg
cagctgtttgcgaataagggcattcatcacacacctccgctggttctcaacttcggaggt
aatccgctgcactgcaactgcgagctgctgtggctgcgccgattgacacgagaggatgac
ctggagacctgtgcttctccgcaggccctggtaggcaagtacttttggtccatcccagaa
gaggagtttgtttgtgagccgccgctgataactcgccacactcatcgccttctagtattg
gaaggccagagagcgacgctaaagtgcaaggctattggtgacccagatccctgggtccac
tggatctcacctgatgaaaaggttatctccaacaccaccagaacagtcgtccatgacaat
ggcaccctggagattctagttacaactacgaaggatgatggaaccttcacgtgtatcgcg
tcgaatcctgctggtgaatccacaacctttgtggagcttagcataattcaccttcctcac
ctgagcaatattactcacaatgttcatcctgagccagatccaggctcttctgatatcact
ggctccactaagcctgcggctaatgcggcaaataatgcctctgacacaaagggttttcag
aatcggagagtggcagcattggatgtcacatccaactccgctgtgatcaaatggtctgcc
agcaaaatgcttcccagtgtacggatgtaccaaatacagtacaacagctcatctgatgat
accttgatgtacagaatgctgccatcttcaagtaagtcctttgtgctcaacaacttgctt
tccggtgccatgtatgatgtctgcgtcatggctatatacgatgacgtcagtacatctttg
acagcaaccaggcttttgggctgcatcgacttcatcactgaagaagagtacatccagtgc
tcctccatgcccagccagttcatcgggggaaccatgataatcgtcatcggtggtatcatc
gtggcctccttgctcgtgtttatcattatcctcatgatacgctacaaggtgtgtgccaat
ccatctgccggaaagatccccgaggtacgcagcgtgtatgcgcccacccgagagattcag
ggtttccagggagggcagcagcaccagttcagctgcaagcttatggtgcaggaggaaggg
cagccttcaagcagcgactccacacgaagccagtcatctgcctcatgtcagcctgcccct
gagggacaggattctaatgcgccagccccgcagtgcaatgtcgacgagccggccgcccac
aagcgcaggcgacgcacgaagtgcagacccaagcgagatccgctgggaaacgttcagcgc
gacaagccggacaacgtgagccactctaagcacgccagccttgttcttcagacaaagcag
gcgctgctcttgcatggctggccagagattgctctaaacaaactggcccgcactccggca
atttctggacctaaacgtagcttgtctctggatatcggcatgttcgctcacactgggaaa
ccgggcactcgaccgaagagaagcatctccatcaatggcctggttttgctatttcaggag
ctggattctatcaaaaatgcacaggatcagcctgaatggatgccagaaagctccgtctga
DBGET
integrated database retrieval system
