KEGG   Petromyzon marinus (sea lamprey): 116939562
Entry
116939562         CDS       T09614                                 
Symbol
XPO1
Name
(RefSeq) exportin-1
  KO
K14290  exportin-1
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn03008  Ribosome biogenesis in eukaryotes
pmrn03013  Nucleocytoplasmic transport
pmrn03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116939562 (XPO1)
   03008 Ribosome biogenesis in eukaryotes
    116939562 (XPO1)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116939562 (XPO1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmrn03019]
    116939562 (XPO1)
   03009 Ribosome biogenesis [BR:pmrn03009]
    116939562 (XPO1)
   03016 Transfer RNA biogenesis [BR:pmrn03016]
    116939562 (XPO1)
   03036 Chromosome and associated proteins [BR:pmrn03036]
    116939562 (XPO1)
Messenger RNA biogenesis [BR:pmrn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     116939562 (XPO1)
Ribosome biogenesis [BR:pmrn03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    116939562 (XPO1)
  Pre-60S particles
    116939562 (XPO1)
Transfer RNA biogenesis [BR:pmrn03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    116939562 (XPO1)
Chromosome and associated proteins [BR:pmrn03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     116939562 (XPO1)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd BspA_v
Other DBs
NCBI-GeneID: 116939562
NCBI-ProteinID: XP_032804010
UniProt: A0AAJ7SR30
LinkDB
Position
6:10752871..10775362
AA seq 1072 aa
MPAIMTMLGDHAARQLLDFGQKLDIGLLDNVVSCLYQGEGPQQRVAQEVLTQLKEHPDAW
TRVDTILEFSQNMNTKYYALQILENAIKTRWKILPRNQCEGIKKYVVYLIIKTSQEPQTM
EKEKVYLGKLNMILVQILKQEWPKNWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQLTQVKAKHLKDSMCNEFSQIFQLCQFVMESSQNAPLVAATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNLTLKCLTEIAGLTVVQYEEQFITLFTLTMIQLKQMLPL
NTNIRLAYSSGKDDEQNFIQNLSLFLCTFLKEHGAVVEKRADLRETLMEALHYMVLISEV
EETEIFKICLEYWNHLASELYRESPMPNSPSPLLLGNHHPEVPPRRQIYLPVLSKVRLIM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTERIMTEKL
HAQVNGTEWSWKNLNTLCWAIGSISGAMYEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKISQKCRRHFV
QVQVGEVMPFIDEILSSINTIICDLQPQQVHTFYEAVGYMISAQTDPIVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGNILKTNVRACRAVGHPFVTQLGRVYLDMLNV
YKCLSENISAAILANGEVVTKQPLIRSMRTVKKETLKLISDWVSRSNDPKLVADNFVPPL
LDAVLIDYQRNVAAAREPEVLSTMATIVNKLGGHITASIPQIFDAVFECTLDMINKDFEE
FPEHRTNFFLLLQAVNSNCFPAFLNIPPAQFKLVLDSIIWAFKHTMRNVADTGLSILYAL
LQNVGQEAVAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHATILANMFSLVEENRITA
PLNPTSPAISNQPFIQEYVANLLKSAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFL
VQIKEFAGEDTSDLYLEEREQSLRQANDEKRKIQLSVPGILNPHEMPEEMCD
NT seq 3219 nt   +upstreamnt  +downstreamnt
atgccagccattatgaccatgttgggagaccacgcagctcggcagctgctggactttggc
cagaagttggacattggtttgctagacaatgtggtcagctgtctgtatcagggagaaggt
ccacagcaacgtgtggcccaagaggtcctaacgcagctcaaggagcaccccgacgcgtgg
actcgggttgacaccattctcgagttttcccagaacatgaacacaaagtactatgcttta
caaatattggagaatgctataaaaacccgctggaagattcttccaagaaatcagtgtgaa
ggaataaagaagtatgttgtttaccttataattaaaacatcacaagaacctcaaacaatg
gagaaagaaaaggtttacctaggaaaattaaacatgattcttgttcagattctgaagcaa
gagtggcccaaaaactggcccacatttatcagtgacattgtaggtgccagccgcacaagt
gaatcgttatgtcagaacaacatggtcattctcaagcttctcagtgaagaagtatttgat
ttttcaagtggacagctcacacaggtcaaagccaagcacctcaaagacagcatgtgcaat
gaattttctcaaatattccaactctgtcaatttgtgatggaatcttcgcagaatgctcca
cttgtcgcagccacacttgaaactttacttaggtttctcaactggattccacttggctac
atatttgaaacaaaactaataagcaccttggtatataagtttctgaacgtgccaatgttc
agaaacctgacgcttaaatgtttgacggaaattgcggggctcactgtggttcagtatgag
gagcaatttatcaccctcttcacactcaccatgatccagctcaaacagatgcttccgctc
aacacaaatatccggttagcatactcgtctgggaaggatgatgagcagaacttcatccaa
aatttgagcctgttcctgtgcacattcctcaaggagcacggtgccgtagtggagaagcgc
gctgatcttcgtgaaaccctcatggaggctttacactacatggtgctgatctcggaggtg
gaggagactgagattttcaagatctgtctggagtattggaatcatctggcgtccgagctg
tacagggagagccccatgccaaattctccctcgccacttttgttgggtaaccaccaccca
gaagtgccgcccaggcgccaaatttacttacccgtcctttcaaaggtgcggctcatcatg
gtgagccgcatggccaagcccgaagaggtgctggttgtagagaatgaccagggagaggtg
gtgcgtgagtttatgaaggacacagactcaatcaacctctacaagaatatgagggagaca
cttgtgtaccttactcacctggattacgtggacacggagcgcatcatgacagagaagctg
cacgcacaggtgaatggcacggagtggtcatggaagaacctcaacacgctgtgctgggcc
atcggatccatcagtggcgccatgtacgaggaggacgagaagcgctttctggtcaccgtc
atcaaggacctcttgggactttgtgagcagaagagagggaaggacaacaaggctatcatc
gcctccaacatcatgtacattgtggggcagtaccctcgtttcctgcgtgcgcattggaag
tttctcaagactgtcgtcaacaagctctttgagttcatgcacgaaacgcatgatggggtg
caggatatggcctgtgacacatttatcaagatttcccagaagtgcagacggcactttgtg
caggtacaagttggagaggtgatgcctttcattgacgagatcctcagcagcatcaacacc
atcatctgtgacctccagccacagcaggtgcacacattctatgaagcggtgggatacatg
atcagtgcccagacagaccccattgtgcaggagcacctgatagagaagtacatgttactg
cccaaccaggtgtgggacagcatcatccagcaagccaccaagaacgtggacatcctcaag
gacccagagacggtgaagcagcttggaaacatcctgaagacaaatgtgcgggcgtgtcgt
gcggtcgggcacccgttcgtcacacagctcgggcgcgtttacttggacatgctgaacgtc
tacaagtgtctaagcgagaacatttcagctgccatccttgccaatggtgaggttgttaca
aaacagccccttatccgtagcatgcgaacagtcaaaaaagaaaccctgaaactcatctca
gactgggtcagccgctccaatgatcccaagctcgtggcagacaactttgtgccacccctc
ctggatgctgtgctcattgactaccaacgcaatgtggcagcggctcgggagccggaggtc
ctgagcacaatggcgaccatagtcaacaagctgggcgggcacatcaccgccagcatccca
cagatcttcgatgccgtcttcgagtgcactctcgacatgatcaacaaggactttgaagag
ttccctgagcaccgaactaacttcttcctgctgctgcaggcagtgaactcgaactgcttc
ccagctttccttaacatcccacctgctcagtttaagttagtgcttgactccatcatctgg
gctttcaagcatacaatgaggaatgttgcagacactgggctttctatcctgtatgcattg
ctacagaatgttggacaggaagcagtagctgcgcaaagcttctaccagacttacttctgt
gacatcctgcagcacattttctcagtggtgacagacacctcgcacactgcgggcctgaca
atgcatgccaccatcctggccaacatgttcagtctggtggaggagaatcggataacggca
ccacttaaccctacgagccctgcgatctcaaatcagccgtttatccaggagtatgtcgcc
aacctcctgaagtctgccttcccacacttgcaggatgcacaagtaaaggtcttcgtaacc
gggctctttagcctaaatcaagacatcccagcatttaaagagcatctgagagactttttg
gtacagataaaggaatttgcaggggaggacacgtcagacctttacctggaagagcgtgag
cagtccctgcgtcaggccaatgatgaaaagaggaagatccaactgtcagttcctgggatc
ctcaacccccatgagatgcctgaggagatgtgtgactga

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