Petromyzon marinus (sea lamprey): 116939562
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Entry
116939562 CDS
T09614
Symbol
XPO1
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03008
Ribosome biogenesis in eukaryotes
pmrn03013
Nucleocytoplasmic transport
pmrn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116939562 (XPO1)
03008 Ribosome biogenesis in eukaryotes
116939562 (XPO1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116939562 (XPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116939562 (XPO1)
03009 Ribosome biogenesis [BR:
pmrn03009
]
116939562 (XPO1)
03016 Transfer RNA biogenesis [BR:
pmrn03016
]
116939562 (XPO1)
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116939562 (XPO1)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116939562 (XPO1)
Ribosome biogenesis [BR:
pmrn03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
116939562 (XPO1)
Pre-60S particles
116939562 (XPO1)
Transfer RNA biogenesis [BR:
pmrn03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
116939562 (XPO1)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
116939562 (XPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
BspA_v
Motif
Other DBs
NCBI-GeneID:
116939562
NCBI-ProteinID:
XP_032804010
UniProt:
A0AAJ7SR30
LinkDB
All DBs
Position
6:10752871..10775362
Genome browser
AA seq
1072 aa
AA seq
DB search
MPAIMTMLGDHAARQLLDFGQKLDIGLLDNVVSCLYQGEGPQQRVAQEVLTQLKEHPDAW
TRVDTILEFSQNMNTKYYALQILENAIKTRWKILPRNQCEGIKKYVVYLIIKTSQEPQTM
EKEKVYLGKLNMILVQILKQEWPKNWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQLTQVKAKHLKDSMCNEFSQIFQLCQFVMESSQNAPLVAATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNLTLKCLTEIAGLTVVQYEEQFITLFTLTMIQLKQMLPL
NTNIRLAYSSGKDDEQNFIQNLSLFLCTFLKEHGAVVEKRADLRETLMEALHYMVLISEV
EETEIFKICLEYWNHLASELYRESPMPNSPSPLLLGNHHPEVPPRRQIYLPVLSKVRLIM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTERIMTEKL
HAQVNGTEWSWKNLNTLCWAIGSISGAMYEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKISQKCRRHFV
QVQVGEVMPFIDEILSSINTIICDLQPQQVHTFYEAVGYMISAQTDPIVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGNILKTNVRACRAVGHPFVTQLGRVYLDMLNV
YKCLSENISAAILANGEVVTKQPLIRSMRTVKKETLKLISDWVSRSNDPKLVADNFVPPL
LDAVLIDYQRNVAAAREPEVLSTMATIVNKLGGHITASIPQIFDAVFECTLDMINKDFEE
FPEHRTNFFLLLQAVNSNCFPAFLNIPPAQFKLVLDSIIWAFKHTMRNVADTGLSILYAL
LQNVGQEAVAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHATILANMFSLVEENRITA
PLNPTSPAISNQPFIQEYVANLLKSAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFL
VQIKEFAGEDTSDLYLEEREQSLRQANDEKRKIQLSVPGILNPHEMPEEMCD
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgccagccattatgaccatgttgggagaccacgcagctcggcagctgctggactttggc
cagaagttggacattggtttgctagacaatgtggtcagctgtctgtatcagggagaaggt
ccacagcaacgtgtggcccaagaggtcctaacgcagctcaaggagcaccccgacgcgtgg
actcgggttgacaccattctcgagttttcccagaacatgaacacaaagtactatgcttta
caaatattggagaatgctataaaaacccgctggaagattcttccaagaaatcagtgtgaa
ggaataaagaagtatgttgtttaccttataattaaaacatcacaagaacctcaaacaatg
gagaaagaaaaggtttacctaggaaaattaaacatgattcttgttcagattctgaagcaa
gagtggcccaaaaactggcccacatttatcagtgacattgtaggtgccagccgcacaagt
gaatcgttatgtcagaacaacatggtcattctcaagcttctcagtgaagaagtatttgat
ttttcaagtggacagctcacacaggtcaaagccaagcacctcaaagacagcatgtgcaat
gaattttctcaaatattccaactctgtcaatttgtgatggaatcttcgcagaatgctcca
cttgtcgcagccacacttgaaactttacttaggtttctcaactggattccacttggctac
atatttgaaacaaaactaataagcaccttggtatataagtttctgaacgtgccaatgttc
agaaacctgacgcttaaatgtttgacggaaattgcggggctcactgtggttcagtatgag
gagcaatttatcaccctcttcacactcaccatgatccagctcaaacagatgcttccgctc
aacacaaatatccggttagcatactcgtctgggaaggatgatgagcagaacttcatccaa
aatttgagcctgttcctgtgcacattcctcaaggagcacggtgccgtagtggagaagcgc
gctgatcttcgtgaaaccctcatggaggctttacactacatggtgctgatctcggaggtg
gaggagactgagattttcaagatctgtctggagtattggaatcatctggcgtccgagctg
tacagggagagccccatgccaaattctccctcgccacttttgttgggtaaccaccaccca
gaagtgccgcccaggcgccaaatttacttacccgtcctttcaaaggtgcggctcatcatg
gtgagccgcatggccaagcccgaagaggtgctggttgtagagaatgaccagggagaggtg
gtgcgtgagtttatgaaggacacagactcaatcaacctctacaagaatatgagggagaca
cttgtgtaccttactcacctggattacgtggacacggagcgcatcatgacagagaagctg
cacgcacaggtgaatggcacggagtggtcatggaagaacctcaacacgctgtgctgggcc
atcggatccatcagtggcgccatgtacgaggaggacgagaagcgctttctggtcaccgtc
atcaaggacctcttgggactttgtgagcagaagagagggaaggacaacaaggctatcatc
gcctccaacatcatgtacattgtggggcagtaccctcgtttcctgcgtgcgcattggaag
tttctcaagactgtcgtcaacaagctctttgagttcatgcacgaaacgcatgatggggtg
caggatatggcctgtgacacatttatcaagatttcccagaagtgcagacggcactttgtg
caggtacaagttggagaggtgatgcctttcattgacgagatcctcagcagcatcaacacc
atcatctgtgacctccagccacagcaggtgcacacattctatgaagcggtgggatacatg
atcagtgcccagacagaccccattgtgcaggagcacctgatagagaagtacatgttactg
cccaaccaggtgtgggacagcatcatccagcaagccaccaagaacgtggacatcctcaag
gacccagagacggtgaagcagcttggaaacatcctgaagacaaatgtgcgggcgtgtcgt
gcggtcgggcacccgttcgtcacacagctcgggcgcgtttacttggacatgctgaacgtc
tacaagtgtctaagcgagaacatttcagctgccatccttgccaatggtgaggttgttaca
aaacagccccttatccgtagcatgcgaacagtcaaaaaagaaaccctgaaactcatctca
gactgggtcagccgctccaatgatcccaagctcgtggcagacaactttgtgccacccctc
ctggatgctgtgctcattgactaccaacgcaatgtggcagcggctcgggagccggaggtc
ctgagcacaatggcgaccatagtcaacaagctgggcgggcacatcaccgccagcatccca
cagatcttcgatgccgtcttcgagtgcactctcgacatgatcaacaaggactttgaagag
ttccctgagcaccgaactaacttcttcctgctgctgcaggcagtgaactcgaactgcttc
ccagctttccttaacatcccacctgctcagtttaagttagtgcttgactccatcatctgg
gctttcaagcatacaatgaggaatgttgcagacactgggctttctatcctgtatgcattg
ctacagaatgttggacaggaagcagtagctgcgcaaagcttctaccagacttacttctgt
gacatcctgcagcacattttctcagtggtgacagacacctcgcacactgcgggcctgaca
atgcatgccaccatcctggccaacatgttcagtctggtggaggagaatcggataacggca
ccacttaaccctacgagccctgcgatctcaaatcagccgtttatccaggagtatgtcgcc
aacctcctgaagtctgccttcccacacttgcaggatgcacaagtaaaggtcttcgtaacc
gggctctttagcctaaatcaagacatcccagcatttaaagagcatctgagagactttttg
gtacagataaaggaatttgcaggggaggacacgtcagacctttacctggaagagcgtgag
cagtccctgcgtcaggccaatgatgaaaagaggaagatccaactgtcagttcctgggatc
ctcaacccccatgagatgcctgaggagatgtgtgactga
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