Petromyzon marinus (sea lamprey): 116939616
Help
Entry
116939616 CDS
T09614
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
116939616
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmrn02000
]
116939616
Transporters [BR:
pmrn02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
116939616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
YmiA-like
Motif
Other DBs
NCBI-GeneID:
116939616
NCBI-ProteinID:
XP_032804126
UniProt:
A0AAJ7WNM8
LinkDB
All DBs
Position
6:12223185..12244433
Genome browser
AA seq
783 aa
AA seq
DB search
MDQTLPAPPVRRPRFANIKVFLLCLSLLFFSKAMSGSYMKSSITSIERHFDLPSSVAGII
DGGFEMGNLLVITAVSYFGARFHRPRIIAAGATLMGLGTLLIALPHFLMGRYDYQSHLYG
EGPQWMCVPRGEQPSLSQEPTSAEPASGSGGEGCQHKAQSSLWVLILVGNALRGIGESPI
TPLGISFLDDHARADNSAFYLGCVMTVGLIGPAVGFLVGSVCTKLFVDVGFVNMEEVTIN
PQDSRWVGAWWLGFLIAGGITLLTALPLWFFPASVPHEEELATAAAVVATVVDGCGDLDA
LSAGERAREASGKEEGAHSANNEQKMVINTRGLDIVGHIAKAELAERNTVQDSAKNKHKA
STELGSRHTENTEASLHLTPETIRSLAKDFLPSLRCLMANPVYVCMLINYVMLMNAFMGF
FTFKAKYLEEQFGETASRSNLIIGAVSLPIVAIGIFLGGLVCKRAKPSLLSLALLVLAME
FPGFLLTLPYFFIGCGGARVAGVTVPYDGGAVLPGGSLLAPCNAHCACSSGAWDPVCGAD
GVTYASPCLAGCSVMRGSGRDTVYQECACIGAGDAHNSSALLEQCPREDDCHRKFILFML
SSSVAAFFNALAFTPSYTFFIRGIRKDLTSFALGIQTLITRVLAGIPAPIVFGAAIDSTC
LKSSSGPACQGEGSCHVYDVNEYRRKQVALMTGFLGTSLLFTVLVVVLIWKDEKKAPRQG
GAEVRAETHGATSSEFLKLPCIRTTGDQECLVSTVTSGLQGSGLDHGERSMRLPNAGGEG
LLL
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggatcagactcttcctgcccctccggtcaggcgacctcggtttgccaacatcaaggtc
ttcctgctctgcctgtcgctgctcttcttctccaaggcgatgtccggcagctacatgaag
agctccatcacctccatcgagcgccacttcgacctgccgagctccgtggccgggatcatc
gacggcggctttgagatgggcaatctgctggtgatcacggctgtgagctactttggggcg
cgcttccatcgtcctcgcatcatcgcagccggagcgaccctcatggggctgggcaccctg
ctcatagccctgccgcacttcctcatgggcagatacgactaccagagtcacctgtacggg
gaggggcctcagtggatgtgcgtgccacgtggcgagcagcccagcctttcgcaggagccc
acatcagcggagccggcatcgggcagtggtggggaaggctgccagcacaaggcgcagtcg
tcactctgggtgctcattctcgtggggaacgcgctcagaggcatcggggagtcgcccatc
actcccctgggcatctccttcctggacgaccacgcgcgcgctgacaactccgccttctac
ctgggatgcgtaatgaccgtggggctcatcggtcctgcagtcggcttcctggttggatcc
gtctgcacgaagctgttcgtggacgtggggttcgtcaacatggaggaggtgaccatcaat
ccgcaggactcccgctgggtgggggcctggtggctgggcttcctgatcgccgggggcatc
acgctgctcaccgcgctcccgctctggttcttcccggcctctgtgccccacgaggaggag
ttggcaacggcggcagcggtggtggcgacggtggtagacgggtgcggagacctggacgct
ctgagcgcgggagagagagctcgtgaagcatccggcaaggaagagggcgcgcactctgcc
aacaatgagcaaaagatggtcattaatacaaggggacttgacattgtcggtcacattgct
aaagcagaacttgctgaaaggaatactgtacaagattcagccaaaaataaacacaaagct
agtactgagcttggcagccggcacactgaaaacacggaggcaagcttgcatctcactccg
gaaacaatcagatctctggctaaagacttcctgccgtccctgcgctgcctgatggcgaac
cccgtgtacgtgtgcatgctcatcaactacgtgatgctcatgaacgccttcatgggcttc
ttcacgttcaaggccaagtacctcgaggaacagtttggcgagacggcttcacgcagcaac
ctcattataggcgcggtgagcctgcccattgtggccatcggcatattcctgggcggcctc
gtgtgcaagcgcgccaagccgtccctgctgagcctggccctgctcgtcctcgcgatggag
ttcccgggattcctcctcacgctgccgtacttcttcatcggatgcggaggggcgcgcgtc
gccggcgttaccgtcccgtatgatggcggtgcagtgctgccgggcgggtcgctgctggct
ccgtgcaacgcgcactgcgcgtgctcctcgggcgcgtgggacccggtgtgcggcgcggac
ggcgtcacctacgcgtcgccctgcctcgccgggtgctccgtcatgcggggcagcggcagg
gacacggtttaccaggagtgcgcttgcattggagccggtgacgcgcacaattcctcagcc
ttgttggagcagtgccctcgggaagacgactgccacaggaagttcatcctcttcatgctc
agctcctccgtggccgcgttcttcaacgccttggccttcacgccgagctacactttcttc
atacgaggcatcagaaaagacctgacttccttcgctctggggatacagaccctcattacc
cgagtgttggctgggatccctgcaccgattgtttttggtgctgccatcgactccacgtgc
ctcaagtcatcatcaggcccggcgtgccagggcgagggctcgtgccacgtgtacgacgtc
aatgagtacaggaggaagcaggtcgcgctaatgactgggtttctgggcacttcgctgctc
ttcacggtcctggttgttgtgctgatctggaaggacgagaagaaagccccgaggcaaggt
ggggcagaggtcagggctgagactcacggtgccacttcgtccgagttcctgaagctgccc
tgcatcaggaccacaggagaccaggagtgcctcgtctcaacggtcacatcgggcctgcag
ggctcagggcttgatcacggggaacggagtatgaggcttcctaatgccggtggtgagggc
ttattgctgtaa
DBGET
integrated database retrieval system
