Petromyzon marinus (sea lamprey): 116939650
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Entry
116939650 CDS
T09614
Symbol
PAX1
Name
(RefSeq) paired box protein Pax-1 isoform X1
KO
K09382
paired box protein 1/9
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116939650 (PAX1)
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
116939650 (PAX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
HTH_29
Motif
Other DBs
NCBI-GeneID:
116939650
NCBI-ProteinID:
XP_032804223
UniProt:
A0AAJ7SRD3
LinkDB
All DBs
Position
6:15641540..15690828
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AA seq
437 aa
AA seq
DB search
MCTVCVLYALLGRQPSPRALSLRVPLPHEASEGTCCDFSPAQVTSSKPSGERCWRCRETA
DQSFGEVNQLGGVFVNGRPLPNPIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYN
ETGSILPGAIGGSKPRVTTPNVVKHIRDYKQRDPGIFAWEIRDRLLADGVCDKYNVPSVS
SISRILRNKIGSLSQPCSQMQDASGMASCKQSAAAAAAAAAAVPYGALYAAYTSSQLHHH
HHHHHHHHGHGPAGKGGAHAMHGATGVHIPAGLPRSWPSSYTVSDILGFRTAAEQQGLIP
EEWCGAARPSFPAGTQAANGLDKPGGGDGDLKYSQGHPSGLPAVSTFVSASGLGPYPSQS
QGGMGAYVAYGGGGGPAPAAGFVPPGHGAAWQAQPHPADLSSPAHFKAAAAAAVAAAAAA
AAARDERGAEALAPRKS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtgtactgtgtgtgtactgtatgcgctactcggcaggcagccgtctcctcgtgcgctc
tcgcttcgtgtgccactgccgcatgaagcgagcgaggggacctgttgcgatttctctccc
gcccaggtgacctcctccaaacccagtggagagcgctgttggcgatgtcgcgagacggca
gaccagtccttcggcgaggtgaaccaactcggcggcgtcttcgtgaacgggcgaccgctg
ccaaacccgatccgcctgcgaatcgtcgagttggcgcagctgggcatcaggccgtgcgac
atctcgcggcagctgcgcgtgtcccacggctgcgtctccaagatcctggctcgctacaac
gagacgggctccatcctgccgggagccatcgggggaagcaagccgcgcgtcaccaccccc
aacgtggtcaagcacatccgcgactacaagcagcgcgacccgggcattttcgcgtgggag
atacgcgaccggctgctcgccgacggcgtctgcgacaagtacaacgtgccctccgtgagc
tccatcagccgcatcctgcgcaacaagatcggcagcctgtcgcagccgtgctcgcagatg
caggacgcgtcgggcatggcctcctgcaagcagtcggcggccgcggccgccgcagctgcg
gccgcggtgccgtacggcgctctgtacgcggcctacacgagctcgcagctgcatcaccac
caccaccatcaccaccaccaccacggacacgggcccgcggggaagggcggcgcgcacgcg
atgcacggcgccacgggcgtgcacatacccgcggggctgccacgctcatggccctcctcc
tacacagtgagcgacatcctgggattcaggacggcggctgagcagcaagggctcatcccg
gaggagtggtgcggcgctgcccggcccagcttccccgccggcacgcaggcggccaacggc
ctcgacaagccgggcggtggcgatggcgacctgaagtattcccagggccacccgtcaggt
ctgcccgcggtcagcaccttcgtgtcggcctcgggcctcgggccctacccgagccagtcg
caggggggcatgggggcctacgtggcgtacggcggagggggtggaccggcaccggccgcg
ggcttcgtgccgccgggccacggggccgcgtggcaagcccagccgcaccccgccgacctc
tcgtcgcccgcgcacttcaaagcggccgccgcggccgccgtcgccgccgcggcggccgca
gcggccgcgagagacgagagaggagcggaggcgttggcgccgaggaagtcctga
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