Petromyzon marinus (sea lamprey): 116939653
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Entry
116939653 CDS
T09614
Symbol
TTC6
Name
(RefSeq) tetratricopeptide repeat protein 6 isoform X1
KO
K24929
tetratricopeptide repeat protein 6
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
116939653 (TTC6)
Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
116939653 (TTC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_8
TPR_17
TPR_9
TPR_16
TPR_12
TPR_19
TPR_14
TPR_6
ARM_TT21_N
TPR_CcmH_CycH
TPR_7
TPR_15
ANAPC3
SHNi-TPR
PPTA
NatA_aux_su
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
116939653
NCBI-ProteinID:
XP_032804228
UniProt:
A0AAJ7ST92
LinkDB
All DBs
Position
6:15988808..16045562
Genome browser
AA seq
2047 aa
AA seq
DB search
MASNNQRSDRACGQSGEEDCLQSKPRRSVQTEPLSAAQTPRFFPELEPSPQLLRSQTRLS
SVSSHGRVNKVEFSGFQNKIVLTECALRTKSEPAGSCDLRIPKENAVRMCKSPVDGAAIP
RINKDGNVDKTQERKRGKWSSTPSIPDIHGKRDEEMVPNVLVPSCQKPVIAHFAGTATQI
VINARAKPTVNSSSQAFAKSTVPQLQSSTGRTTPGATTKSALQNKKHNFGSKNNDGESCD
KIPKSCSLDRNKPNDQQQKEDGSRWLLQEDAQLIHRDKCAVTKTYEIMASQKSAAELLKE
AKEIAKPDAPKMFEKHIKDEDGGKGDLPPHPAPFVLHSPNLSDKVTLNNRNMCREEFCID
THQMTKVNEGVMQTSMPKFDQDSLSIQKRAENKKNQADGSSSICGSGNKAPVFVTCLPDA
ASEMKVCAVTNNIFKVSSKSQSILDSSHNNHGKRTVDLANEREDAMLPDQISPANFFQVQ
RIKQQIVKRKLGGSENSKLFADKPLYNLPAKAATDKEVGACSIHYFCTGNLSNVVPPRLQ
QFSRFCHAPSKYPPSWSKLAEESFNSETARTLEQGVSLTEVLASEKDCLPVMPTSCPSSL
EEWRRVAEICVQSPQFCVVGKQVPLKIDVSRLFWNPSPPKFACPTSYFKQLICPIYQTDL
LKTMADTEALPAEMDNEGDDDDDEEEEMRECLEERDHTGRVLSRTYGSEPALGRPGPLRS
LCDLVVTCASPGGARSQQEVWETCSSEKCDDPRLLNWHVHSVVEKVNHMLKPRKCISEPS
LNHEDSDFNLKAPSDFRTCMDELEAHKAMIKFAAKELKDASAKSCDQTEVCVKPRQKIAK
LTPAEKAREAGLKYVHYPKKKKKKRHSLHPDKLEAVLDQLQLPPRLLTRCCSDPHLQSPR
GKPPSWVLHSVHRDRRRPSLPRCLDFGSFADNQGRFPEDESPREWVRDIWNRWFDEVFPP
TPKPSNNLLHASTGTNSEALGVSAVDKTDVEIRDASAAPAVVNMGFAELKPGKEDLEAEG
ERLSGLIEAQGQPSSFHFCRRGAVYRKLGRLDLAKSDLDTAINKEVMLLDAYWHRHFIHL
LQDNPRAALDDLNFILKHNQTRADAYRSRAEIYSSLGDIDMALCNYSQAIKNNSEDYESY
FRRAEANQRRGDMQLAMQDYAQAARINASQVEALIRCGRFHLKQRDWAAAIQDFTTLIDR
EPNNALHRTHRGIAYASVNCYKEAIKDFTLSIRLDPKNWIGFYHRGCLLREALPTKALQD
LSISVLLNNRADNMLAFLHRGMLYAQMGRWTEAICDFEIVQQMDRTVALAHMNLGLILLT
VKKQYHAAVKCFTAALKTLPTCIRAYVHRAEAYHKVGDLHSALCDVTKAIHLEPTSFHLY
LMRGQYLYEMNNKTLAVFCLRHVLKMSQELGLCSMQQAIIQSFLKDHQQAIACLAGMCSM
QPQVTTLALLGSIQMKAEQFQEAKMSFEQALHLSNSVNKDQQPADAARANIYFLLGLCLI
EQSNFKEALKAFSAVLHIVPKHQEALYKRGICRLRLQDSSGLLDINQTLALNPHHIQAYL
TRAAYYGMKGRFTKAIMNCNEVLKIQPSCVRAFLYRGSLKYYIKAYKLAVEDLSSAIYLD
GSCSLALYNRAICYQELHETDKAVKDYSTIALLGKQNDLCRKVMTNRGLLYFDRGDYQNA
QQDFYAASKISPTDPKLLQALGICYHRLGRVKEAVAAFGEATKADPFYVSAYVGRGNALM
NYGHAPGTRAAQRDYLRALRLNPLSAHARVNLAYSLQANGRFQKAWNHFTTAIELDTRCA
EAFEGRAVVNLQMNSTFAALQDINAAVKLGKSAEVLTNRGAIHQCSGDVVSAMRDYQAAI
VADPNYALAYYNAANVYLHGRQLTQALDYYDRVVELDPMDECAILNRAIVRSLSGDATGA
LADFCKAATLSPQTSYIYFNRANLHSMLGQYKRAEADYTEALTLQPHDAVTYLCRAEVRG
KLGEKEDAISDYRRAVEIQTGRKESLEIPMSRHRMFTVMLQDSVNCTDQKCTQTCPSTMI
GTTIPHL
NT seq
6144 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaacaatcagcggagcgatcgcgcgtgtggtcaaagcggggaagaagattgt
ctgcagagcaaaccacggcgcagcgtgcagacagaaccgctttcagctgcgcagacgccc
aggtttttcccagaacttgaaccttctccgcagctccttcgtagccaaaccagactttcc
agtgtctcatcccacggccgcgttaacaaagttgaattttcaggttttcaaaataaaatt
gttttaaccgagtgtgcactgcgtacaaaaagtgaacccgctggatcgtgtgatttacgc
atccctaaagagaatgctgtcagaatgtgtaagtcacctgtggatggcgcagccattccc
agaataaataaagatgggaatgtagataagacacaagagagaaaacgtgggaaatggtca
tcaacaccatctatccctgatattcatggtaaacgtgatgaagaaatggtgccaaatgtg
cttgtgccctcgtgccaaaaacctgttatagcacattttgctgggactgctactcagatt
gtcataaatgccagagccaagccaactgtaaattcatcttctcaagcatttgctaaatct
actgtgccacaactacagagttccacaggaaggacaacacctggagctaccacaaaatct
gctttacagaataaaaaacataattttggatccaaaaacaatgacggtgaaagttgtgat
aaaatacctaaatcatgctctctggacagaaataagccaaatgatcaacaacaaaaggaa
gatggttcgcgttggcttttgcaagaagatgcacaattaatacatagggacaaatgtgct
gtgaccaaaacatatgaaataatggcttcccaaaagtcagctgcggagctgttgaaagag
gctaaagagatcgctaaacctgacgctccaaaaatgtttgagaaacatattaaggatgaa
gatggtggaaagggagatctaccaccgcatcctgcaccattcgtgctacactcgccaaac
ctgtctgacaaggtcacgttaaataacaggaatatgtgtagggaagaattctgtattgac
acgcatcagatgactaaagttaatgaaggagtgatgcaaacctccatgcccaaatttgat
caggactccttaagcatacagaaacgtgcagaaaacaagaaaaatcaagcagatggtagt
tcatcaatttgtggcagcggaaacaaagcgccagtttttgtcacatgcttgccagacgct
gcgtcagaaatgaaagtttgtgcagtgacaaataacattttcaaggtctcttcgaagtcc
cagtcaatccttgattccagtcacaataatcacggaaaacgaactgttgatttggctaat
gaaagagaagatgccatgcttcccgatcagatttctcctgccaacttttttcaagtacaa
agaataaagcaacaaattgttaaaaggaaacttggtggctcagagaacagtaaactgttt
gcggataagcctctgtacaacctgcctgcaaaggcagctactgataaggaggttggtgct
tgcagcatccactatttctgcactggaaacctaagcaatgttgttcctccaaggttgcag
cagttttccaggttttgtcatgcacccagcaagtacccaccttcctggagtaaattagct
gaagaaagtttcaattcggaaacggcaaggactctcgagcaaggtgtcagccttacagaa
gtattagcttctgagaaagactgtctacctgttatgccaacatcatgtccttcaagtcta
gaggaatggcggagagtcgcagagatctgcgtacaaagtcctcagttttgtgtggttggg
aagcaggtgccactgaagatagatgtttcaaggttgttctggaatccttcgcctcctaag
tttgcttgccctacctcttacttcaaacagcttatttgtcccatataccagactgatctg
ttgaaaacaatggccgatacagaggcacttcctgctgaaatggataatgaaggcgatgat
gatgatgatgaagaagaagagatgagagaatgtcttgaagagagagatcacaccggtcgt
gtgttatctcggacttatggatcagagccagccttgggcagacccgggccattgcggtca
ctctgtgacctcgtggtgacctgcgcaagccctggcggggcacggagccagcaagaagtt
tgggaaacatgttcaagtgaaaaatgcgatgatccaagacttttaaattggcatgtgcat
tctgtagtcgagaaggtaaaccacatgttaaaaccaaggaaatgcatatctgagccatct
ttaaatcacgaagattctgactttaatttgaaagcaccttctgacttcaggacttgcatg
gatgaactggaagctcacaaagcgatgataaaatttgctgccaaagaacttaaagatgct
tctgcaaaaagttgtgatcaaacagaagtgtgtgttaagccaaggcaaaaaattgccaaa
ctaactccagctgaaaaggccagagaagcaggtctaaaatatgtccattacccaaagaaa
aaaaagaaaaaaagacattcactccacccagacaagctcgaagctgtcttggatcagctc
cagttacccccaaggctcttgacacggtgttgttcagatcctcatctgcagagcccacgt
gggaagccaccctcgtgggttttacacagcgttcatcgtgaccgccgcagaccaagcctt
ccacgttgtttggattttgggagctttgcagacaatcagggaagattcccagaagatgaa
agtcctcgggagtgggtccgagacatttggaaccgctggtttgatgaagtgtttcctcca
acaccaaagcccagcaacaacttattgcatgcatccacagggaccaattcggaggcgtta
ggtgtatcagcagtagataagacagatgttgaaattcgtgatgctagtgctgcgcctgct
gttgtgaacatgggttttgcagagctgaagccagggaaggaggatcttgaagcagaaggt
gaacgcctctctggtctcattgaggctcaaggacagccctcgtcattccatttttgtcgc
aggggagctgtctacagaaagcttgggcggcttgatttggcaaagtcagatttagataca
gccatcaacaaggaagtgatgctgctggacgcgtactggcatcgtcactttattcacctg
ctgcaagacaatccacgtgctgcactagatgacctgaacttcatcctcaaacataaccag
acacgtgcagatgcatatagatcccgggcagaaatatacagcagtcttggagacattgac
atggctctgtgcaattacagccaggctataaagaacaactctgaggattatgagagttac
tttcgacgtgcggaagccaatcagcggaggggggatatgcaactggctatgcaggattat
gctcaggctgcccgtatcaacgcaagccaggtggaagcgttgataaggtgtggaagattt
cacttgaagcaaagagattgggctgctgccatccaggactttacaactttgattgatcga
gagcctaacaatgcactgcatcgtacacatcgaggaatagcgtatgccagtgtgaattgc
tacaaggaggcaatcaaagactttacgttgagcatccgcttggacccgaagaactggatc
ggcttctaccatcgagggtgcctcctgcgtgaagctctcccgacaaaggctctgcaggac
ctcagcatctcagtcctcttgaacaaccgggcagacaatatgctggctttcctgcaccgt
gggatgctgtacgcccagatgggaaggtggacagaagcaatctgtgactttgagattgta
cagcagatggacaggactgtggccctagcccacatgaacctaggactgatcctgctgacg
gtgaagaagcaataccatgcggccgtgaagtgttttactgcggccttgaagaccttgcct
acctgcatccgcgcctacgtgcatcgggctgaggcataccataaggttggcgacctccac
agcgccctctgtgatgtgaccaaggcgatccacctggagccaacctcgttccacctctac
ctgatgagagggcagtatctatatgaaatgaacaacaagacactggctgtcttttgcctg
cgccacgttttaaaaatgagtcaagagttgggcttgtgctcaatgcagcaggcgatcatc
cagtcctttctaaaggaccatcagcaggccatcgcgtgtctggctggcatgtgcagcatg
cagccgcaggtcaccacgcttgctttgctcggcagcattcagatgaaggccgagcagttc
caggaggcaaaaatgagctttgagcaagcactacacttgagcaactcagtcaacaaagac
cagcagccagctgatgccgcaagggccaacatttatttccttttggggctgtgtctaata
gagcaatctaacttcaaagaggctttgaaggcattcagcgctgttctgcatatcgtgcca
aagcaccaagaggccttgtacaagcgaggcatctgtcgcttgaggttgcaggattcttca
ggattattggacatcaaccagacattggctctcaacccacaccatattcaggcgtatctg
acccgtgcagcatactatggcatgaagggaagatttacaaaggccatcatgaactgtaat
gaagtgctgaagatacagcccagctgtgtgagagcattcctgtatcgtgggtcacttaaa
tattacatcaaggcatacaagctagcagtggaagaccttagctctgccatctacctggat
ggcagctgctcactggccttgtacaaccgtgctatctgctatcaagagcttcatgagact
gacaaggctgtgaaggattacagcaccattgccttgcttggaaagcaaaatgacttgtgc
agaaaagtgatgacaaatcgaggattgctatactttgacagaggagactatcaaaatgca
cagcaggatttttatgcagccagcaagatcagtcctacagaccccaaactgctccaggca
ttgggaatctgctatcacaggctcggccgcgtgaaagaagccgtcgctgcatttggcgaa
gccacgaaggcagaccccttctacgtgagcgcgtacgttgggcgcggcaacgccctcatg
aactacggccacgcgcccggcaccagggcggctcagcgagactacctccgagcgctgcgc
ctcaacccgctgagcgcccacgccagggttaacctggcctacagccttcaggcaaatgga
aggtttcagaaggcttggaatcatttcacaacagcaattgagctggacacacgatgcgct
gaagcatttgagggccgtgcagttgtaaacctccagatgaacagcacgtttgccgcactg
caagacatcaatgcagccgtgaagctggggaagtcggccgaggtgctgacaaaccgcggc
gcgatccaccagtgttcaggcgatgtggtgagcgcgatgcgcgactaccaggctgccatc
gtcgccgatcccaactacgccctcgcgtactacaacgccgccaacgtgtacctgcacggc
cgccagctgacgcaggcactagattactatgaccgggtggtggaactggatccgatggat
gaatgtgccatcctgaatcgggccatcgtccgctcgctgagcggcgatgccacgggagct
ctggctgacttttgcaaggccgccacgctaagcccacaaacgtcatacatctacttcaat
cgtgcaaaccttcactctatgctcggtcagtacaaacgagcggaagcagactacactgaa
gctctgacccttcagccgcacgatgcagttacctacttgtgcagggcagaagtccgtggc
aagctgggggaaaaggaggatgcgatatccgattatagacgtgcggtggagatacagacg
gggagaaaagagtcactggaaattccaatgtctcgccaccggatgttcactgtgatgctg
caagactccgtgaactgcaccgaccagaagtgcactcaaacctgcccctcaacaatgatc
ggaacaacaatcccgcatctatga
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integrated database retrieval system
