Petromyzon marinus (sea lamprey): 116939671
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Entry
116939671 CDS
T09614
Symbol
IRF2BP2
Name
(RefSeq) interferon regulatory factor 2-binding protein 2
KO
K22383
interferon regulatory factor 2-binding protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116939671 (IRF2BP2)
04121 Ubiquitin system [BR:
pmrn04121
]
116939671 (IRF2BP2)
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
116939671 (IRF2BP2)
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Atypical E3
116939671 (IRF2BP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
TFIIA
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
116939671
NCBI-ProteinID:
XP_032804276
UniProt:
A0AAJ7WNI0
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All DBs
Position
6:complement(16769118..16772598)
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AA seq
772 aa
AA seq
DB search
MSSTSMAASAAVSASSAASRRQSCYLCDLPRMPWAMLWDFSEPVCRGCVNYEGADRIELV
LDTARALKRTHGFQEGRSPGPPSSAPSLAASLKVDALSSSASSAAASSSSKDVPMNHVEM
MGGRPLSHQAASSMERYQLSAAAAERARMLEFHPPAAPGRITNGLPASPAVNGFPKVEEQ
PPELQRQSPNPRRTHSVPPPGALPPSLIPHHMVSGGGGGPHHQQQHQQHHHHQQQQQQQH
HQQQHHQLPLGFGHPGAGRHPHQHPGLPLSLGVSMDALGVKQQQQQQQQQHQRGGSSSSS
SSSVDGERDLKEKRGVEALAELAESVRNRAEEWPGRPKAVRETLLTLSNSTPFDVRLKRD
PTLQRGRVVAVDCGCASGGGGGGKGASDYYELKVFVEYPSGTGVVFPSASGAARQMCQDS
MKDFTRGPSSGLKWLEYERKHGTGDWRPMSELLTDAVRFFRDVPRGEMLPVPFLDPGCPV
LPTVYCSVPRAYLGSRGQRKRKASPEPPDSVGSGGPKVNGSGGGGGGEDHSHGRQQPWMP
PPPPGGAAAAAAGAGGGGGGYPPSMPHPPPAAALNSSRTTPPESTLRNGTSPMAALMSVA
DNLVTAQSPKEGNNQVHSTTAKRSSSSSPVSPASAAGQQQQQQQRRGGGGGGGGGGGGAV
RNGETPRPSSQSDAEQSVPQSLPDSSVAGNGPLCCTNCHERLEDTHFVQCPSVPSHKFCF
PCSRESIKKQGVNGEVYCPSGQKCPLVGSNVPWAFMQGEIATILAVKKEMDH
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccacctccatggcggcctctgccgcggtctctgcctcgtcggccgcgtcgcgc
cgccagtcgtgctacctgtgcgacctgccccgcatgccctgggccatgctgtgggacttc
tcggagcccgtgtgtcgcggctgcgtcaactacgagggagccgaccgcatcgagctggtg
ctggacacggcgcgcgcgctcaagcgcacccacggctttcaggagggccgctcgccgggg
cctccctcctcggcgccctccctcgccgcctcgctcaaggtggacgcgctctcgtcttcg
gcgtcctctgccgcggcatcttcgtcgtccaaggacgtgcctatgaaccacgtggagatg
atgggcggcaggccgctgtcgcaccaagccgcctcttccatggaacgctatcagctgtcg
gcggcggccgcagagcgcgcccgcatgctcgagttccacccgccggcggcgcccggccgc
atcacgaacgggctgcccgcgtcgccggccgtgaacggcttccccaaggtcgaggagcag
ccgcccgagctgcagcggcagagcccgaacccgcgtcggacgcactccgtgccgccgccc
ggcgccttaccccccagcctcatcccgcaccacatggtgagtggcggcggcggcggcccg
caccaccagcaacaacaccagcaacaccaccaccaccagcagcaacagcagcagcagcac
caccagcaacagcaccaccagctaccgttgggcttcgggcacccaggggctggcagacac
ccgcaccagcacccggggctgccgctgtcgctgggcgtgagtatggacgcgctgggggtg
aaacagcagcagcagcaacagcagcagcagcaccagcgtggggggtcttcgtcgtcgtcg
tcttcgtccgtggacggcgagcgggatctgaaggagaagcgcggcgtggaggccctggcc
gagctggcggagagcgtgcgcaaccgcgccgaggagtggcccgggcggcccaaggccgtg
cgtgagacgctgctcacgctgtccaacagcaccccgttcgacgtgcgcctcaagcgggac
cccacgctccagcgagggcgcgtggtggccgtggactgcggttgcgcgagcggcggaggc
ggcggggggaagggcgcctcggactactacgagctgaaggtgttcgtggagtacccgagc
ggcacgggggtggtgttccccagcgcgtcgggtgccgcgcggcagatgtgccaggacagc
atgaaggactttacccgcgggccctcgtccggcctcaagtggctagagtacgagcgcaag
catggcacgggcgactggcggcccatgtccgagctgctcacggatgccgtgcgcttcttc
agggacgtgccgagaggggaaatgctgcccgtgcccttcctggaccccggctgccccgtg
ctgcccaccgtgtactgcagcgtgccccgcgcgtacctgggcagccgagggcagcgcaag
cggaaagcgtcgcccgagcccccggattcggtgggcagcggtggccccaaggtgaacgga
agtggaggcggcggcggcggcgaggaccactcgcacggcaggcagcagccgtggatgccg
ccgcctcccccaggcggtgcggcggcggcggcggccggggcaggaggaggaggaggaggc
tacccgcccagcatgcctcacccgccgccagcggccgcgctcaactcgagccgcacgacg
cctcccgagtcgaccctgcgcaacgggacgtcccccatggccgcgctcatgtcagtggcc
gacaacctggtgacggcgcagtcgcccaaggagggcaacaaccaggtacactccaccacg
gccaagcgcagcagcagcagcagccccgtttcacccgcatctgcagccgggcagcaacag
cagcagcagcagcgtcgtggaggaggtggaggaggaggcggaggaggaggaggcgcagtg
cgcaatggtgagacgccgaggcctagctcgcagtcggacgccgagcagtcggtgccgcag
tccctgccggactcgtccgtggcgggcaacgggcccctgtgctgcaccaactgccacgag
cggctggaggacacgcacttcgtgcagtgcccgtccgtgccgtcgcacaagttctgcttc
ccgtgctcgcgcgagagcatcaagaagcagggcgtcaacggcgaggtgtactgcccgagc
gggcagaagtgtcccctggtgggctccaacgtgccctgggccttcatgcagggtgaaata
gcgaccatactggccgtcaagaaggagatggaccattaa
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