Petromyzon marinus (sea lamprey): 116939717
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Entry
116939717 CDS
T09614
Symbol
FANCL
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03460
Fanconi anemia pathway
pmrn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116939717 (FANCL)
09124 Replication and repair
03460 Fanconi anemia pathway
116939717 (FANCL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116939717 (FANCL)
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116939717 (FANCL)
Enzymes [BR:
pmrn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116939717 (FANCL)
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116939717 (FANCL)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
116939717 (FANCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d1
FANCL_d2
zf-RING_2
SLX1_C
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
116939717
NCBI-ProteinID:
XP_032804362
UniProt:
A0AAJ7STS1
LinkDB
All DBs
Position
6:18770255..18793521
Genome browser
AA seq
377 aa
AA seq
DB search
MLRGVMACSGMMQECPLLVRLNQEGTLYDGFITVRERDFRLHVALPPDGQVRNARLHCSW
QLKQALRGHQALVKQRLEQSQSLEDFIVELKMILETSLRSKRALHAPPPPSYYSRLIGEI
EALGWETLTFIDPNFSTIGFSFWDTSGRPHTITLNLKPQYPVEAPECLVDIPVTFDLHWT
PQSSLATMQSHFLTAVEALKDFWDTMDEIDRNTWVLEPEKPSRASTTRRIAIGNSASLHL
EVDPQHPKTFPECRFLGADHVVTPLRNKLSANMHHWHPEASVLHNLLHLLEIELPSPATH
NKADFSMECGICYAYRLEGAIPDQVCDEPRCGQPFHQACLYEWLRSLPSCTQSFNVVFGK
CPYCSKPITLKLGPNTT
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgttacgaggagtcatggcttgcagtgggatgatgcaggagtgccctctgcttgtgcgg
ctgaaccaagagggaaccctctatgatggcttcatcaccgtcagggaaagagattttagg
ttgcatgttgcacttccaccagatggccaagtgagaaatgcaaggctgcactgcagctgg
cagctcaagcaggcactccgaggccaccaagcacttgtgaagcagaggctagaacaaagc
cagtccttagaagacttcatcgtggagctaaagatgatcttggagacttctttaaggagc
aaaagagcactgcacgcgccaccacctccttcttactactcgcggctcattggagaaatt
gaggccctgggatgggaaacgctaactttcatcgaccccaacttcagcactattgggttc
agcttctgggacacaagtggacgcccgcataccatcaccctcaacctgaagccacagtac
cctgttgaggctccagaatgcttggttgatatccctgtgacatttgaccttcactggacc
ccacaaagcagcctggctaccatgcaaagtcatttcctgacagccgtggaagccctgaag
gatttctgggacacgatggatgagatcgaccggaacacctgggtgctggaacccgagaag
ccctcccgtgcttccactacacgccgcatcgccattggcaatagtgcatcgctgcacctg
gaggtggacccacagcatcccaagacgtttcccgaatgtcgcttcctaggtgctgaccac
gtggtcacccctctaaggaacaagctcagtgcaaacatgcatcattggcaccctgaagcc
tcagtattgcacaacctgctccacctgctggagattgagcttccttcgcccgcaacccac
aacaaggccgacttcagtatggagtgtggcatctgttatgcataccggctggaaggtgca
atccctgaccaggtgtgcgacgagcctcggtgtggtcagcccttccaccaggcctgcctt
tacgagtggctgaggtctcttccctcgtgcacacagagcttcaacgtcgtgtttggaaag
tgtccttactgcagcaagcccattacattgaagttgggtccaaacaccacataa
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integrated database retrieval system
