Petromyzon marinus (sea lamprey): 116939718
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Entry
116939718 CDS
T09614
Symbol
BBS1
Name
(RefSeq) Bardet-Biedl syndrome 1 protein
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmrn03037
]
116939718 (BBS1)
Cilium and associated proteins [BR:
pmrn03037
]
Primary cilia and associated proteins
BBSome
116939718 (BBS1)
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Gene cluster
GFIT
Motif
Pfam:
BBS1
GAE_BBS1
BBS2_Mid
Beta-prop_IFT122_2nd
PHTB1_N
PQQ_2
Motif
Other DBs
NCBI-GeneID:
116939718
NCBI-ProteinID:
XP_032804367
UniProt:
A0AAJ7WNV8
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All DBs
Position
6:18803761..18821998
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AA seq
586 aa
AA seq
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MENADAKESVEGNPKWLDAHYDPVANLYTFTSCMALADLHGDGDNKLVVADLGTGAYSMK
LRVFRGTAPLVENTLIDLPTGVATFFMDTNEPRSPAIAVASGPFVYVYKNLRPYFKFTLP
PLEVNQLEMDLWIQAREDKIDYMALKEMLENIRSKGDVPLTVRSLKFLMVEPQEMAAFAA
VHKHTPLKRQTVITCLSTLRKSLADEDAVSCLVVGTESSDIFVLDPEAFTILAKMSLPSV
PVFVDISGLFDVEFRVVVACRNGNVYTLKRDSKKPRHCIELSSQPVGLVRVNKNVVVGCM
DESLQGYTQKGKKLWTVNLPAAITTMQLMDHKGRGFKAVLVAMVNSEVHIYRDKYLVNII
KTQDVVTSVCFGRYGREDSTLVMTTKGGGLAIKILKRTAVFEEKDATLGPPVAQNIKLNV
PKKTKLYVDQTLRERECAVSMHRVFQTDLYRLRLEAARAYMKALDSCLAPVSSSLAEPLK
LNATVQGIGPNFKLTLNLQNTSPSRPCVGLFVCFLYDERLYSMTQAFFKLPMLVPGLNYP
IETFVECRSDQGISDIIKVFAVREGSSIPILTAHINMPVSEGLPFS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgcagacgccaaggagagtgtggaggggaaccccaagtggctagatgcacac
tacgacccagtggccaacctgtacaccttcacttcatgcatggcattggcagatctgcat
ggagatggagacaataagttggtggtggccgacttgggcacgggcgcgtacagcatgaag
ctgcgcgtgttccgcggcacggcgccactcgtagagaacaccctcatcgacctgcccacc
ggcgtcgccaccttcttcatggacaccaacgaaccccgctcacccgccatcgccgtcgcc
tcgggtcccttcgtgtacgtctacaagaacctgcggccctacttcaagttcaccctgccg
ccacttgaggtcaaccagctggagatggacctctggatccaggcgagagaggacaaaatc
gactacatggctctcaaagaaatgctggaaaacatacggagcaaaggagacgtccctctt
actgtcagatcgctaaagttcctcatggtggagcctcaggagatggcagccttcgctgcc
gttcacaaacacacgccactcaagcgccagacagtgatcacgtgcctgagcacgctgcgg
aagagcctggcggatgaagacgctgtgagctgccttgtggtgggcaccgagagctccgac
atctttgtgctggaccccgaggcctttactatcctggccaaaatgagcctgcccagtgta
cccgtcttcgtggacatatccggcctcttcgacgttgagttccgagtggtggtggcttgc
cgcaacggcaacgtctacaccctcaagcgggactcgaagaagccgcggcactgcattgag
ctgagctcgcagcccgtggggcttgtgcgcgtcaacaagaatgtggtggtgggctgcatg
gacgagagcctgcagggatacacgcagaagggaaaaaagttgtggactgtcaacttgccg
gccgccataaccaccatgcagctcatggaccacaagggccgaggcttcaaagctgttctg
gtggccatggttaactccgaggtgcatatataccgggacaagtacctcgtgaacatcatc
aaaacgcaggatgtagtgaccagtgtctgcttcggcagatatggccgtgaggacagcaca
ttggtcatgaccaccaaaggtggtggcctggccatcaagattctgaagcgcacggcagtg
tttgaggagaaagacgccactctggggccccctgtggcgcagaacatcaagctcaacgtg
cccaagaagaccaagctctacgtggatcagacgctacgcgagcgcgagtgtgccgtttcc
atgcaccgggtgtttcaaacggatctatatcgcctgcgtctggaggcggcacgtgcctac
atgaaggccctggactcctgcctcgcgcccgtctcctccagcctcgccgagcccctcaaa
ttgaacgccacggtgcagggcattggccccaactttaaactgacgctgaacttgcagaat
acatcgccaagccgtccctgtgtgggactctttgtctgcttcttatatgatgagcgcctg
tactctatgactcaagccttcttcaagcttccaatgctggttcctggactaaattaccca
attgagacctttgtggagtgtcgcagtgaccaaggcatctctgatatcattaaggtgttt
gcagtccgtgaaggaagcagcataccaattctgactgctcatatcaatatgccagtcagt
gagggcctgcctttctcctaa
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