Petromyzon marinus (sea lamprey): 116939751
Help
Entry
116939751 CDS
T09614
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04517
IgSF CAM signaling
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116939751 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116939751 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmrn04812
]
116939751 (SPTBN1)
Cytoskeleton proteins [BR:
pmrn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116939751 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
116939751 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
MG280
DUF2935
Motif
Other DBs
NCBI-GeneID:
116939751
NCBI-ProteinID:
XP_032804406
UniProt:
A0AAJ7STE2
LinkDB
All DBs
Position
6:4076217..4127989
Genome browser
AA seq
2359 aa
AA seq
DB search
MTAVSKDLEGSMDIQQQYESINNRWEASEEDWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGEKLPKPTRGKMRIHCLENVDK
ALQFLKEQKVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDISVETEDNKERRSAKDA
LLLWCQMKTAGYQNVNIHNFTTSWRDGLAFNAIVHKHRPDLIEFDKLKKSNAHHNLQNAF
NIAEQKLGLTKLLDPEDISVDQPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLESAI
ETDQMIDKYETLASELLEWIEQTIIILNNRKFANSLTGVQQQLQAFSTYRTVEKPNKFTE
KGNLEVLLFTIQSKMRANNQKVYTPREGKLVNEINKAWERLEKAEHERELALRNELIRQE
KLEQLARRFDRKAALRETWLSENQRLVTQDNFGVDLPAVEAATKKHEAIEADIAAYEERV
QAVVDVARELEAEDYHEVRRVCSRRDNVLRLWEYLQELLAARRHRLEANLALQRVFQEML
HIVDWMDEMKVRLLSQDYGKHLLGVEDLLQKHALVEADITVQADRVKAVNAAAQRFSSED
DAYKPCDPHVVSERATHLEERYAELCSLAAERRSKLEESRKLWRFFWEMAELEGWVREKE
PLLSSGDVGKDLTGVLRLLGQHRAVEDELNGRSADLKQTVREGEEMADAGHFGADDIRAR
VAEMHVLWASLEDLAAQRKRRLQVAESLYQFQADADDIEVWMEDTLRIVSSDEMGHDEFS
TQSLNKKHKDVTEEISSYRPVLDALHEQAQGLPDEVTVSAGVPDRLEALEQRYRELVELS
RVRKQRLQDALALYKMYSEAEACELWIDEKSQWLNAMDVPEKLEDLEVIQHRFEGFEPEM
NSQASRIAVVNQLARQLMHAGHPSEQDIKAKQDHLNSVWSDFRELVDQKKEALSSALSIQ
NFHLECNETKAWIREKTKVIESTQELGNDLAGVMALQRKLSGMERDLAAIQTKLADLQGE
AERLASMHPEQEDAILGRLAEINQVWDNLKETLQNREESLGEASKLQQFLRDLDDFQTWL
SKAQTAIASEDMPNTLPEAEKLLAQHEAIKNEIDNYQDDYQRMRDMGEVVTRDQSDPQYM
FLHQRLQALDTGWNELNKMWENRHSLLSQSHGFQAFLKDARQADGFLSNQEYVLGHVEMP
ATLESAEEAIKNHEDVMTTMDTNDEKIVGALETGRRLLTEDNTYADKIQEKVDSIDERHK
KNRMTAEDVLARLKDNRDLQRFLQDCQELTLWINEKMLTAQDMSYDEARNLHTKWQKHQA
FMAELASNKEWLEKIDEEGQQLMVEKPETEPMVKEKLSELHELWDELENTTQLKAQRLFD
ANRAELFTQSCADLDKWVNQIESQISSDDHGNDLTSVNILIKKQQMLENQMEVRKKEVEE
LQSQATVLCQEGKGRDEVDSQRLTVENRFEQVLAPLQQRRDKLLASKEVHQYIRDLEDEI
LWVEERMPLAASRDHGNNLQTVQLLIKKNQNLQKEIQGHEPRIEDIRERGEDLIARGSVD
PEAIHERLEDLRALWATMIVEAKDRHIRLEESLKAQQYYFDVAEAEAWMSEQELYMIADE
KAKDEQSAVAMLKKHQILEQSVENYSDVIHQLSETSRNLVTSRHPESERIGLRQSQADKL
YAGLKDLAEERRGRLEERHKLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLSER
FAEFARDTATIGQERVDSVNRIADALIEAGHSDSASVADWKDGLNEAWADLLELIDTRTQ
MLAASYELHRFNHDAREVLSRINEKQMQLPEELGRDQNTVESLQRKHTTFENDIQALGVQ
VKVLQEDAERLRGSYAGEKVEDIERREEEVVTAWKGLLDACEARKLRLADTGEKFRFFSL
VRDLMLWMENTIRQINAQEKPRDVSSVELLMNNHQGIKAEIDTRNDNFTTVIELGKSLLA
RQHYATDEIKEKLGQLTDKRKEMVSKWEERAHWLKLILEVHQFARDAGVAEAWLLAQEPH
ITTQEVGESVDEVEQLLKRHEAFEKSVSTWDERFNVLEKHTTLELLELRKQQEKEDEERK
QQKLQAELDEKKREEHHIAEQQRIQSQEVTQNGISSDQESPRQGSNMLDPSVNGNGDNEA
DGARKLTPEPSPSSDRRKPQTLHSQSVSTLPGKAEEASAFRKEGFLLRKHEWESHNKKAS
SRSWHTLYCVLHNQEFGFYKDSKNMNTGNTYHNEIPVNLANAVCDVASDYKKKKHVLRLK
LPDGNDYLLQAKDDEEMANWIHSIKAAASSRDSSSPSSQGSQAPMRSKTMPSGPPSEATS
PEKKEKDREKRFSFLKMKK
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggtaagcaaagacctggagggcagcatggacatacagcagcagtacgagagc
atcaacaaccgatgggaggcaagcgaggaggactgggacaatgagaacagctcggcgagg
ctctttgagcgctcccgaatcaaggctcttgctgatgagcgtgaggctgtacagaagaag
accttcaccaagtgggtgaactctcacctggcgcgcgtatcctgccgcatcaccgacctc
tacacggacctgcgcgatggccgcatgctcatcaagctcctcgaggtcctatctggggag
aagctgcccaagccgacgcgtggcaagatgcgcatccactgcctcgagaatgtggacaag
gcgctgcagttcctcaaggagcagaaggtgcacctggagaacatgggctcgcacgacatc
gtggatggaaaccaccgtctcatcctgggcctcatctggaccatcatcctgcgtttccag
attcaagacatcagcgtggaaaccgaagacaataaggagagaagatccgctaaggacgcc
ttactcctgtggtgtcaaatgaaaacagctggataccagaatgtcaacatacacaacttc
acgaccagctggcgggacggtctggccttcaatgccatcgtccacaaacacaggcctgat
ctgattgagtttgacaaactgaagaagtccaatgctcatcacaatctgcaaaatgctttc
aacatcgctgagcagaaactcgggctcaccaagcttcttgatcctgaagacatcagtgtg
gaccaacctgatgagaagtccatcatcacctacgtagtcacgtactaccattatttctcc
aagatgaaggccttggctgttgagggcaagcgcattggaaaggtgctggaaagtgccatt
gaaacagaccagatgattgataagtatgagacgctggcatcggaactgctggagtggatt
gagcagaccatcatcattctcaacaaccgcaaatttgccaactctctaaccggggtgcag
cagcagctgcaagccttcagcacctaccgcaccgtggagaagccaaataaattcacagag
aaagggaacctggaggtacttctcttcaccatccagagcaagatgagagcaaacaaccag
aaggtgtacactccccgggaaggcaagctcgtcaacgagatcaacaaggcctgggagcgc
ctggagaaggcggagcacgaacgggagctggctctgcggaacgagctcatccgacaggag
aagctggagcagctggctcgacgctttgaccgcaaagcggctcttcgcgagacctggctc
agcgagaaccagcgcctcgtcacacaggacaactttggcgtggacctgccggccgtggag
gcggccaccaagaagcacgaggcgattgaggccgacatcgcggcctacgaggagcgcgtg
caggccgtggtggacgtggcacgtgagctggaggccgaggactaccacgaggtgcgccgc
gtgtgttcgcggcgcgacaacgtgctgcgcctatgggagtacctgcaggagctgctggcg
gcacggcgccaccgcctcgaggccaacctcgctctacagcgcgtcttccaggagatgctg
cacatcgtcgactggatggatgaaatgaaggtgcggctgctttcacaagactacggcaaa
cacctgctgggcgtggaggacctgctgcaaaagcatgcactggtggaggccgacatcacc
gtgcaggctgacagagtcaaggccgtcaatgcagcggcacaaaggttttccagcgaagac
gatgcgtacaagccgtgcgacccgcacgtggtcagcgagcgggctacacacctggaggag
cgctatgcagagctgtgctcgctggccgccgagcggcgctccaagctggaggagtctcgc
aagctgtggcgcttcttctgggagatggctgagctggaggggtgggtgcgcgagaaggag
ccgctgctgtcgtcgggcgacgtcggcaaggacctgacgggcgtgttgcgcctgctgggg
cagcaccgcgccgtcgaggatgagctcaacggccgctcggccgatctcaagcagacggtg
cgcgaaggcgaggagatggccgacgcgggacacttcggcgccgacgacatccgcgcgcgc
gtcgccgagatgcacgtgctgtgggccagcctggaggacctggcggcgcagcgcaagcgg
cgactgcaggtggccgagagcctgtaccagttccaggcagacgccgatgacatagaggtg
tggatggaggacacgctgcgcatcgtctccagcgacgagatgggccacgacgagttctct
actcagtcgctcaacaagaagcacaaggacgtcaccgaggagatctccagctacaggcct
gtgttggatgcgctgcacgagcaggcgcaggggctcccagatgaggtgacagtcagcgcc
ggcgtgccggaccgcctggaggctctggagcagcgctaccgcgagctcgtggagttgtcg
cgcgtgcgcaagcagcggctgcaggatgccctggcactctacaagatgtacagtgaggcg
gaggcctgcgagctgtggattgacgagaagagccagtggctcaatgccatggatgtgccc
gaaaagctcgaggatctggaggttattcagcacaggtttgaaggttttgaaccagagatg
aacagccaggcttctcggatagcagtcgtaaaccaactggctcggcagctcatgcatgcg
ggacacccaagcgaacaagacatcaaggctaagcaggatcatctcaactctgtctggagc
gacttccgagagcttgtggaccaaaagaaagaagcactgagctccgccctgagcatccag
aacttccacctggagtgcaacgaaactaaagcgtggatccgcgagaagactaaagtcatc
gagtccacacaggagctgggcaacgacctcgccggcgtcatggccttgcagcgcaagctg
tctggcatggagcgcgacctcgctgcaattcagacaaaattggccgacttgcaaggcgag
gcggagcgtttggcctcgatgcaccccgagcaggaagatgccatcttgggccgccttgcg
gagattaaccaggtgtgggacaacctgaaggagacgctgcagaacagagaggagtcgctg
ggagaagccagcaagctgcagcagttcttgcgcgacctcgatgatttccagacctggctg
tctaaagctcagacagcgattgcatcggaggatatgcccaacacgctcccggaagcggag
aagctgctggcgcagcacgaagctatcaagaacgagatcgacaactaccaagacgactac
cagcgcatgcgcgacatgggcgaagtggtgacacgcgatcagagtgacccgcagtacatg
tttctgcaccagcgcctgcaagcgctcgacacgggctggaatgagctcaacaagatgtgg
gagaacaggcatagcctactgtcccagtcacatggcttccaggccttccttaaggatgcc
cgccaagcagacggcttcctcagcaatcaggagtatgtgctgggccatgttgagatgccg
gctaccttggagagtgccgaggaggccatcaagaaccacgaggacgtcatgacgaccatg
gacacgaacgatgaaaaaattgtcggcgcgctggagaccggcaggaggctgctcaccgag
gataacacatacgcagacaagatccaggagaaggtagactccatcgatgaaaggcataag
aagaaccgtatgacagctgaagatgttcttgctcgactcaaggacaaccgagatctccag
aggttcttgcaggattgccaagagctcaccttgtggatcaatgagaagatgctgacagcc
caggacatgtcgtacgacgaggcacggaacctgcacaccaagtggcagaagcaccaagcc
ttcatggccgagctggcgtccaacaaggagtggctggagaagattgatgaggaagggcag
cagctaatggtggagaagccggagactgagccgatggtgaaggaaaaattgtcagagctg
cacgagctgtgggatgagctggagaacaccacacagctcaaggcccagaggctctttgac
gcaaatcgtgcagagctgttcacgcaaagctgtgctgacctggacaagtgggtcaatcag
atcgagtcgcagatcagctctgacgaccacggcaatgacctcaccagcgttaacatcctg
atcaagaaacaacagatgctggagaatcagatggaggtgcggaagaaggaggtggaggag
ttgcagagccaagcgaccgtgctgtgccaggaggggaaaggacgggacgaggtggatagc
caacggctcacggtggaaaaccgctttgagcaggtgctagcgcccttgcagcagcgacgc
gacaagctgctggcatccaaagaggtgcaccagtacatccgggacctcgaggatgagatc
ctttgggtggaagagcgcatgccactggccgcatctagagaccacggaaacaaccttcaa
accgtccaactgctcatcaagaaaaaccagaacctgcagaaggagatccagggtcacgag
ccgcgcatcgaggacatacgcgaacgcggtgaagacctaattgcacgcggcagcgtcgac
ccggaggccatccatgaaaggctcgaggacctgcgggcgctgtgggccaccatgatcgtg
gaggccaaagaccgccacatccggcttgaggagtccctcaaggcccagcagtactacttc
gatgtggctgaggcggaggcgtggatgagtgagcaggagctctatatgatcgccgacgag
aaagccaaggacgagcagagtgccgtggccatgctgaagaagcatcagatcttggagcag
tcggtggagaattactcggatgttattcaccagctgtcagaaaccagtcgcaacctcgtc
acttccaggcatccagaaagcgagcgcattgggctgcgacagtcccaggctgacaagctc
tacgctggcctcaaggacctggcagaggagcgacgggggcggctggaggagcggcacaag
ctattccaactcaaccgcgaggtggacgacctggagcagtggattgctgaacgcgaggtg
gtggccggctctcatgagttgggccaggactacgaacacgtcaccatgctgagcgaacgt
tttgcggagttcgcacgcgacacggcgacgatcggccaggagcgtgtggacagcgtgaac
aggatcgcagacgcgctgatcgaggctggccactcggactccgcctcggtggctgactgg
aaggatggcctcaacgaggcatgggccgacctcctggagctcatcgacacacgcactcag
atgctggccgcctcgtatgagctgcatcgcttcaatcacgacgcacgtgaggtgctgtcc
cgtatcaacgagaagcaaatgcagctgcctgaggagctgggccgtgaccagaacacagtc
gagagcctacagcgcaagcacaccaccttcgagaacgacatccaggcactcggcgtgcag
gtgaaggtgctgcaggaggatgcggagagattgagaggaagctacgcaggggagaaagtg
gaggacatcgagcggcgggaggaagaggtggtgaccgcctggaaggggctgctggacgcc
tgtgaagctcgcaagctgcggctagctgacactggcgagaagttccgcttcttcagcctc
gtgcgggacctgatgctctggatggaaaacacaatccggcagatcaacgcccaggagaag
ccgagggatgtctcttcagtggagttgctgatgaacaaccaccagggaattaaggcggaa
attgatacccgaaatgacaacttcacgaccgtcattgagcttgggaaatctctactagcc
cgtcaacactacgcaacagacgagataaaagagaaacttggtcagctgactgacaagcga
aaggagatggtcagcaagtgggaggagagagcccactggctcaaactgatcctcgaggtg
caccagtttgcgcgcgacgcgggggttgccgaggcatggctgctggcccaggagccacac
atcaccacgcaggaggtcggcgagagcgtggacgaggtggagcagctgctcaagcgccac
gaggcctttgagaagtccgtctccacatgggatgagcgattcaacgtgctcgagaagcac
accaccctggaactcttggagctgcgcaaacaacaggagaaggaagatgaagagaggaag
cagcagaaactgcaggctgagttagacgaaaagaaacgcgaagagcatcatatagctgaa
caacaaaggatacagagtcaagaggtcacacaaaacggcatctcttccgaccaagaatca
cccaggcagggctccaacatgctggatccatcggtgaacggcaatggcgacaacgaggca
gatggtgcgaggaagctgaccccggagccatcgccatcgtccgaccgtcggaagccccag
acgctgcattctcagtctgtgtccacattgcctggcaaggccgaggaggcatcagccttc
cgcaaagaaggcttcctgttgcgaaaacacgagtgggagtcgcataacaagaaggcgtcc
agcaggtcttggcacacactttactgtgtgctgcacaaccaagaatttggattctacaag
gattccaagaacatgaacactggaaacacctaccataatgaaatccctgtcaatttggcc
aacgcggtgtgtgacgttgcctcggactacaaaaagaagaagcacgtgctcagacttaag
cttcctgatggaaatgactacctgcttcaggccaaagatgatgaggagatggccaactgg
atacacagcatcaaggcagcagcttcgagccgggactcaagctcgcccagcagccaaggg
agccaggcgcccatgcgctccaagaccatgccgtccggccctcccagcgaagccaccagc
cctgagaagaaggagaaggatcgggagaaaaggtttagcttccttaagatgaagaagtag
DBGET
integrated database retrieval system
