Petromyzon marinus (sea lamprey): 116939760
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Entry
116939760 CDS
T09614
Name
(RefSeq) RNA-binding protein Nova-1-like isoform X1
KO
K14944
RNA-binding protein Nova
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116939760
Spliceosome [BR:
pmrn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116939760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_Vigilin
KH_NusA_2nd
RIC3
Motif
Other DBs
NCBI-GeneID:
116939760
NCBI-ProteinID:
XP_032804424
UniProt:
A0AAJ7WNL2
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Position
6:complement(4354015..4391349)
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AA seq
532 aa
AA seq
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MRSSEHGAATLSQPSNTAMASVHSPQQQHQQQHQQQQQQNGMHAVAAQQLEYEPSDSRKR
PLEAPMEAGSTKRSNTSGDDGQYYLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK
SKDFYPGTTERVALIQGTAESLNGVHNFIAEKIREMPAAASKPEPVTLLQPQTAVSPDRM
KQAKIIVPNTTAGLIIGKGGATVKSMMEQSGAWVQLSQKPEGGSLQERVVTVSGEPEQSR
HAVQLIVQKIQEDPQSGSCLNISYAGITGPVANANPTGSPYASPAPGISPGDVLPTAGLL
GHAGLANVAAFPTVLSGFGGTDLVAISSALSTLAGYGYSLPGPGLALGLAPAAPTPMFGS
SPSAMAAANILASYANEAGGVPGSGGAAAAAAACAAAAAAGGAPGAFSLGGLGAAGIAAN
GGYMGSAATPLMAGALLGGEKHDGGKDALEIAVPENLVGAILGKGGKTLVEYQEMTGARI
QISKKGEFVPGTRNRKVTITGPPASTQAAQYLITQRIVYEQGLRATNPQKVG
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtagcgagcacggcgcggcgacactctcacagccgagcaatacggccatggcc
tcagtgcacagcccacagcagcagcaccagcagcagcaccagcagcagcagcagcagaac
ggcatgcacgcggttgccgcgcagcagcttgagtacgagccctcggattcgcgcaagcgg
cccctggaagcgcccatggaggcgggcagcaccaagcgttcgaacaccagcggcgatgat
ggccagtactacctgaaggtgctcatccccagctacgccgccggctccattattggcaag
ggcggccagacgatcgtgcagctgcagaaggagaccggagccaccatcaagctctccaag
tccaaggacttctacccaggcacgacggagagggtggcactgatccagggcacggccgag
tcgctcaacggcgtccacaacttcatcgccgagaagatccgcgagatgcccgccgccgcc
agcaagccggagcccgtcaccctgctgcagccgcagacggccgtgagccccgaccgcatg
aagcaggcgaaaatcatcgtgccgaacaccaccgccgggctgatcatcggcaagggtggc
gctaccgtcaagtccatgatggagcagtcaggcgcctgggtgcagctctcgcagaagccg
gagggcggcagcttgcaggagcgcgtggtgacggtgagcggcgagcccgagcagtcgcgc
cacgccgtgcagctcatcgtccagaagatccaggaggacccgcagagcggcagctgcctc
aacatcagctatgccggcatcacggggcccgtggccaacgccaaccccaccggctcccca
tacgccagccccgcgccgggcatctccccaggggacgtgctgcccaccgcggggctactg
ggccacgccggccttgccaacgtggccgccttcccgaccgtgctgtcgggcttcggcgga
accgacctggtggccatctcgtcggcgctcagcaccctggcgggctacggctacagcctg
ccggggcccgggctggcgctgggcctggcgccggccgcgccgacgcccatgttcggctcc
agcccgtcggcgatggcggcggcgaacatcctcgcgagctacgccaacgaggcgggcggc
gtgcccggctccgggggcgccgccgcggccgcggccgcgtgcgccgcggcggccgcggcc
ggcggggcccccggcgcgttctcgctgggcggcctgggagcggcgggcattgccgccaac
ggcgggtacatgggctcggcggccacgccgctcatggccggcgctctgctcggcggggaa
aaacacgacggtggcaaggacgcgctggagatcgcggtgcccgagaacctggtgggcgcc
atcctcggcaaggggggaaagacgctggtggagtaccaggagatgacgggcgcccgcatc
cagatctccaagaagggcgagttcgtgccggggacgcgcaaccgcaaggtgacgataacg
gggcccccggcctcgacgcaggccgcacagtacctcatcacgcagcgcatcgtctacgag
cagggcctgcgcgccaccaacccgcagaaggtcgggtag
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