Petromyzon marinus (sea lamprey): 116939770
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Entry
116939770 CDS
T09614
Symbol
PEX6
Name
(RefSeq) peroxisome biogenesis factor 6 isoform X1
KO
K13339
peroxin-6
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116939770 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116939770 (PEX6)
Membrane trafficking [BR:
pmrn04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
116939770 (PEX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_22
RuvB_N
AAA_lid_3
AAA_5
AAA_33
RNA_helicase
AAA_7
Mg_chelatase
nSTAND3
TsaE
Rad17
TIP49
AAA_25
AAA_18
IstB_IS21
ABC_tran
AAA_28
PEX6_4th
Cytidylate_kin
Sigma54_activat
NPHP3_N
AAA_2
AAA_14
Parvo_NS1
RsgA_GTPase
PhoH
Vps4_C
T2SSE
Motif
Other DBs
NCBI-GeneID:
116939770
NCBI-ProteinID:
XP_032804448
UniProt:
A0AAJ7SRT5
LinkDB
All DBs
Position
6:complement(13699534..13716043)
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AA seq
1401 aa
AA seq
DB search
MRASRAATLLQLQKQQQQQQQQHQQEHHALHVRVSRSAWEAAFGRENRQQQQEEEGDEEP
ETPREQQHHRQRQQMKQAVLLQGEGRFLGLRVRGLAGMRWGSEGAAGSTGTSGPERTLLV
YAWLDDDDDGGALSLGDVVQGDRPGTGTPSAPLHVRASALFFRHHGLRPGAAAVAVPLGG
SPAGVRRLVLGARSRAAFSWASGEAFAAGLRTLAAGGPPGILVRRGDPLIVPCLPMMLAN
GVMGGQGVSGAQAEEGGSGGAGVSGAPVAAGVQGIFGDHGASGTPGTLARLAALSLDLLV
LDCGPVLQGTLRPDASLLLADLSEAGQGSRAGSGDGAGLGARPGQGARPGHLAESASGAG
ARNGAGSRSEEEGTRVNLAVAEDGFGARGFGQMVSPAGAGFADELGHVAESGTNAGLGDG
RAGRVNGTGTAYGNDLGNDGAAPPSGLIDFHDITGAAEVSDVRAFERAMEVQPVLASDFA
RLLADLTARGTALPGDAPGHAASTGPRRTIRCWPNAGLSALLDRDVDSHSCVVVGRQTLG
RLGLFHGEWVTLWQRPDADVARSRPADGHHEEDSPLLYPDGTGHRRDGVSEEEAGEAAAA
VVVVPTDDRPAGEKRGGRCARIFGVDARELQRLSLHPRQNDGDDGLVEEALVCPSLIFNA
CPRPWPITSLKPAGCFFTVERLRGEVPLTSSRSALGCPPIAGSLCVAIVESPQYKTGGNY
DNILRKHFETPRLVKAGDVLCIPTRHSADFLSEEKVKGALWWPVLYYQVKSVNLVEGRQD
EKQLPGKNGRMKENDEGQPGGQDRSENLCYLVDTKSTNVYLEGSVNAFAPVRLEGAVATD
GGHPLWDSDCPPGLTSAVDELTVVALPYVSSSSAALLDGQCSVLLCGPSGAGKTVVVRAV
CRRLNLHLAQMSGASLCRETAAAAEARLRSAFSRAAALAPCVLLVKGVEPLGRDSGGKED
ARVTHTLRQLLWERQREAGRLPVLVLGTAVSRQSVAPGVQSCFLHELRVDRPDEGSRAAI
LQALAHASPLGPDVSLARLAQHTAGFVLGDLCALLSGACRAAYARVAQACSEHGFLSPEE
ERALCELGVCVTADDFSSALDELQAKHAHAVGAPEIPRVHWDDVGGLSDVKRELLDLVQL
PRRLQGLRSGSGLRRSGLLLFGPPGTGKTLLAKALATECSMTFLSVKGPELINMYVGQSE
ENVRDVFARARSAAPCVVFFDELDSLAPNRGRSGDSGGVTDRVVSQLLAELDGMHTSGDV
FVVGATNRPDLLDPALLRPGRFDKMLYVGVSEDRAAQLRVLRAVTRKLTLGGDVSLEALV
EAAPPCLTGADMYALASHAMMAAVKRKIALIERAEDTEESELVVEDGDFRAALGTLQPSV
TEEELRQYEALRQRHTPASRR
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcctcccgtgccgccactctgctgcagctgcagaagcagcaacaacaacagcag
cagcagcatcagcaagagcaccacgcgctgcatgtgcgtgtgtctcggtcggcatgggag
gccgcgttcggccgggagaaccggcagcagcagcaggaggaggagggagatgaagagccg
gagacgccacgcgaacaacaacatcatcgtcagcggcagcagatgaagcaggcggtcctg
ctgcagggagaaggccgcttcctcggcctgcgggtgcgggggctcgcggggatgcgctgg
ggttcagagggagcggcggggtcaaccgggacgtcgggacccgagcgcaccctcctcgtg
tacgcgtggctcgacgacgacgacgacggaggggccctctcactgggggacgtcgtccag
ggggaccggcccggcacagggaccccctcggcccctctgcacgtgcgcgcctcggccctc
ttcttccggcaccacggcctccgcccgggggccgcggcagtcgcggttcccctcgggggg
tctcccgcgggggtccggcgcctggtgctgggagcccggagcagggcagccttctcgtgg
gcctccggggaggccttcgcggccgggctgaggactttggcggcggggggtccgccgggg
atcctggtgcggcgaggggacccgctcattgtcccctgcctcccgatgatgcttgcgaac
ggggtcatgggtgggcagggagtttcaggggcccaagcggaagagggcggatcgggggga
gcgggggtctcgggtgccccggtggccgcgggggttcaggggatcttcggggaccacggt
gcctcggggacaccggggacccttgccaggctggccgccctcagcctggacctcctggtc
cttgactgtggccccgtgctgcaggggaccctgaggcccgacgcgtcgctccttctcgcc
gacctctcggaggctggccaggggagcagggcggggtcgggcgacggggcagggctcgga
gcaaggccggggcaaggggcaaggccggggcatttggcggagtcggccagcggggcaggg
gcacggaatggggcagggtcgaggtcagaggaggaggggacgcgagtgaatttggcagtg
gcggaggatgggttcggggcaagaggttttggccagatggtgagtcctgcgggagcagga
tttgcagatgaattgggccacgtggcagagtcggggaccaacgcgggtcttggtgatggg
agggcaggtcgagtgaatgggacaggaactgcgtacggcaatgacttgggtaatgatggg
gcagcgcctccatcaggactgattgactttcacgacatcacaggcgcagcagaggtctcg
gacgtcagagccttcgagcgtgcgatggaggtgcagccggtgctggcctcagactttgct
cgcctcctggcggatttgaccgcccgcggcacggccttgccaggagatgccccgggccac
gcggcgtccactgggccccgtcgcaccatcaggtgctggcccaacgccggcctctccgca
ctgctggacagggacgtggattctcactcgtgcgtggtggtcggcaggcagaccctcggc
cggctgggcctcttccacggtgagtgggtcacgctctggcagcgaccagacgctgatgtg
gccaggagccgcccggcagacggacaccacgaagaggattccccacttttatatcctgat
gggactggccaccggcgagatggtgtgtcagaggaagaagcaggagaagcagcagcagcc
gtggtggtggtgccgacagatgaccggcctgcgggtgagaaaagaggtggacgttgcgca
aggatatttggcgtcgacgcacgggaactgcagaggctgtcgcttcacccccgccagaac
gatggagatgatggcctggtagaagaagccctcgtctgccccagcctgatcttcaatgcc
tgccctcgcccctggccgatcacgtctctcaaacctgcaggttgcttcttcacggtggaa
aggctgagaggggaggtccctttgacgagcagccgctcggccctcgggtgtccccccatc
gccggcagtctctgtgtggctatcgtggagtctccgcagtacaagaccggagggaactac
gacaacatcctgcgcaagcactttgaaaccccccgtctagtgaaggctggagatgtgttg
tgcatccccacaaggcatagtgctgacttcctgagtgaagagaaggtgaaaggggctctc
tggtggccggtgctctactaccaggtgaagagtgtgaacttggtggagggtcgacaggac
gagaagcagctgcctggaaaaaatggacggatgaaggagaatgatgaggggcaaccagga
ggccaggatcggtctgaaaacttgtgctacttggtggacacaaaaagcacaaatgtgtac
ctggaagggtctgtgaacgcgtttgcgccggtacggttggaaggagctgtggccactgat
gggggtcacccgctctgggacagcgactgcccaccggggctgacgtccgccgtggacgag
ctgaccgtcgtggcactcccctacgtctccagcagcagcgccgcgctgctggatggccag
tgctcggtgctgctgtgcgggcccagcggggcaggcaagacggtggtggtgcgcgctgtc
tgccgccggctcaacctgcacctcgcgcagatgagcggagcgtcgctctgcagggaaacg
gcggcggcggccgaggctcgcctgcgctcggccttctcgcgtgccgccgcactggcgccg
tgcgttctgctcgtcaagggggtggaacccctgggtcgcgactcagggggcaaagaggac
gcgcgagtcacgcacaccctgcgccagctgctgtgggagcggcagcgagaagccggccgc
ctgccggtgctggtgctgggcacggcggtgtcacggcagagtgtcgcgcccggcgtgcag
agttgctttctgcacgagctgcgtgtggaccgccccgatgaggggtcccgcgccgccatc
ctgcaggcgctcgcgcacgcctcgccgctcgggcccgacgtctcgctcgctcgcctcgcc
cagcacacagccggcttcgtgctgggagacctctgcgcgctgctctccggggcgtgccga
gcggcctatgccagggtagcgcaggcgtgctccgagcatgggttcctcagcccggaggag
gagcgagcgctgtgcgagctgggcgtgtgcgtcaccgcggacgacttctcctccgcgctc
gacgagctgcaggccaagcacgcgcacgccgtgggggcgcccgagatcccgcgcgtgcac
tgggatgacgtgggggggctgtcggacgtgaagcgagagctgctcgacttggtgcagctg
ccccggcggctgcagggcctgcgctccgggtcgggcctgcgtcgctcggggctgctcctc
ttcgggccgcccggcaccggcaagacgctgctggccaaggcccttgccaccgagtgctcc
atgaccttcctcagcgtgaagggcccggagctgataaacatgtacgtgggccagagcgag
gagaacgttcgcgatgtgtttgctcgcgcgcgctctgccgccccctgcgtggttttcttc
gacgagctcgactccctggcgccgaaccggggtcgcagcggcgactccggaggggtcacg
gacagggtggtgtcgcagctgctggctgagctggacgggatgcacacgagcggggacgtg
tttgtggtcggggccacgaaccgcccggacctgctcgaccccgcgctgctacggcccggg
aggttcgacaagatgctgtacgtgggcgtgagcgaggatcgggctgcccagctgcgggtg
ttgcgtgccgtcacccgcaagctgacgctgggcggggacgtgagcctggaggccctggtg
gaggcggccccaccgtgcctcacgggggccgacatgtacgcactcgcatcgcacgccatg
atggcggccgtcaagcgaaagattgcgctcatcgagagagcagaggacacggaggagtcg
gagctggtggtggaggatggcgatttccgcgcggcgctcggtaccctgcagccgtcggtg
acggaggaggagctgcgccagtacgaggctctgcgccaacggcacacgcccgccagccgg
cgctga
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integrated database retrieval system
