Petromyzon marinus (sea lamprey): 116939826
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Entry
116939826 CDS
T09614
Symbol
GTF2H3
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03022
Basal transcription factors
pmrn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116939826 (GTF2H3)
09124 Replication and repair
03420 Nucleotide excision repair
116939826 (GTF2H3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmrn03021
]
116939826 (GTF2H3)
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116939826 (GTF2H3)
Transcription machinery [BR:
pmrn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116939826 (GTF2H3)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116939826 (GTF2H3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Trm732_C
MavL
Motif
Other DBs
NCBI-GeneID:
116939826
NCBI-ProteinID:
XP_032804570
UniProt:
A0AAJ7STL6
LinkDB
All DBs
Position
7:complement(1096955..1138257)
Genome browser
AA seq
308 aa
AA seq
DB search
MATEEDINLLVIVLDVNPIWWGTRKLQNLEFTLPRCVDAVMVFANSHLAMSRNHRLAVIA
SHNQESRFLYPASGTATEQQASDAGDSAGPRDGRCELLATANHAIATQITALLANTEVTA
DMRSDSLLAGSLAKALCYIHRITKENEGAGQDVKSRILVIKAADDSASQYMNFMNVIFAA
QKQNIFIDACVLGSDSGLLQQACDITGGIYLQVPQIAALLQYLQWVFLPDPELRASLVLP
PPVQVDYRAACFCHRNLIAIGYVCSVCLSIFCTFSPICTTCETAFRLALPLGLKTKKKKS
KLPSGLTS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaagaggacattaacctgctggtgatcgtgttggatgtgaatcccatatgg
tggggaacaagaaaactccaaaacctggagtttacactgccacgttgtgtggatgctgtg
atggtcttcgccaactcccatctggcaatgagcaggaaccatcggcttgcagtcatcgca
agccacaaccaagagagtcggttcctgtacccggcgagtgggacagccacggaacagcag
gcgagtgatgcgggggattcggctggcccacgtgacggccgctgtgagctgctggcgacc
gccaaccacgccatcgccacccagatcacggcattgcttgccaacactgaagtgacagca
gatatgaggtctgattcacttttggctggatctttggcaaaggcgctgtgttacattcac
agaatcacgaaagagaatgaaggggcaggacaagatgtaaagtccagaattctggtgatt
aaagctgcggacgacagtgcttctcagtacatgaacttcatgaatgtcatttttgcggca
cagaaacagaatatatttattgatgcctgtgttttgggatcagactcaggtcttctgcaa
caggcatgtgacatcacaggtggcatctatctgcaagttccacagatagcagccttattg
caatatttgcagtgggtgttcctcccagaccctgagctgcgtgccagcttggtcctccca
ccccccgtgcaggtggactaccgcgctgcctgcttctgccaccgcaacctcatcgccatt
ggctacgtctgctccgtgtgcctctccattttctgcacctttagcccaatctgcacaact
tgcgagacggcattccggctggctttacctcttggactcaaaaccaagaagaagaaatca
aaacttccatctgggctgacgtcttag
DBGET
integrated database retrieval system
