Petromyzon marinus (sea lamprey): 116939875
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Entry
116939875 CDS
T09614
Name
(RefSeq) beta-hexosaminidase subunit alpha-like isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00511
Other glycan degradation
pmrn00513
Various types of N-glycan biosynthesis
pmrn00520
Amino sugar and nucleotide sugar metabolism
pmrn00531
Glycosaminoglycan degradation
pmrn00600
Sphingolipid metabolism
pmrn00603
Glycosphingolipid biosynthesis - globo and isoglobo series
pmrn00604
Glycosphingolipid biosynthesis - ganglio series
pmrn01100
Metabolic pathways
pmrn04142
Lysosome
Module
pmrn_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
116939875
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
116939875
00513 Various types of N-glycan biosynthesis
116939875
00531 Glycosaminoglycan degradation
116939875
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
116939875
00604 Glycosphingolipid biosynthesis - ganglio series
116939875
00511 Other glycan degradation
116939875
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116939875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pmrn03110
]
116939875
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
116939875
Chaperones and folding catalysts [BR:
pmrn03110
]
Intramolecular chaperones
Others
116939875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
116939875
NCBI-ProteinID:
XP_032804728
UniProt:
A0AAJ7WQ72
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All DBs
Position
1:27388120..27407491
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AA seq
564 aa
AA seq
DB search
MAACTAAAAVRTTPLPLLLLPLLLLLLVHAAAGETMVAEDWLEKPPRGDSPFGSVWPRPQ
VLRSSAIALQLSHERFRLEHDPASSAQVGCQVLDDAFRRYYNIIFSGSPYPGASSKLHRK
PTTKTRAVGEVSLLSVLVQSSHNDCNDFPGLNSNESYELSVQAGESLLQAPSVWGALRGL
ETFSQLAYRDDNDGILMNKTEVVDFPRFRHRGLLLDTSRHYLPLIVILETLDAMAYNKLN
VFHWHIVDDQSFPYQSQTFPELSEKGAYNPSRAIYTETDVGAVIWYARERGIRVIPEFDT
PGHTQSWGKGEPNLLTPCYNGKEPSGLFGPVHPVTNSTYDFMKKLFNEISNAFPDHYIHL
GGDEVSFSCWQSNPDITSFMEKMSFGKDYKKLESYYIQQILDIVASYKKGYMVWQEVFDN
GVKLKPDTVVHVWKFMAEHYKQEMADVTAAGFSTLLSAPWYINSIAYGQDWTKYYAVEPL
DFHGTDKQKELVVGGEACLWGEYVDGTNLTPRLWPRASAVAERLWSDKSVTDVNDAYSRL
AKHRCRMVQRGIAAQPLFVGFCDI
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctgcaccgccgctgccgctgtgcggaccacgccgctgcccctgctgctgctg
cccctgctcctcctgctgctcgtccatgcggccgccggcgagacgatggtcgccgaagat
tggctggagaagcccccgcggggggattcgcccttcggctccgtgtggccgcggccgcag
gttctgcgctcgtcggcgattgcgttgcagctgagccacgagcgcttccgcctggagcac
gacccggcctcgagcgcgcaggttggatgccaggtcctcgacgatgccttccgtcgctac
tacaatataattttcagcggatcgccttatccgggggcctcaagcaagcttcaccgcaag
cccaccacgaagacacgcgccgtcggcgaggtctccttactgagcgttctcgtgcagagc
agccacaacgactgcaacgacttccctggcctcaactcaaacgagtcctatgagctgagc
gtgcaagcgggcgagtctctgttgcaggccccctctgtgtggggggccctccgaggtctg
gagacgttcagccaactggcttaccgggatgacaatgatgggattttaatgaacaagact
gaggtggtggatttccctcggttccggcatcgcgggctgctgctggacacctcgcgccac
tacctgcctctaatcgtcatcctcgagacattggatgccatggcctacaacaagttgaac
gtcttccattggcacattgtggatgatcagtcattcccgtaccaaagccagacgttcccc
gagctcagcgaaaagggggcatacaacccatctagggctatctacaccgagacggatgta
ggagctgtgatttggtatgctcgcgaacgaggaattcgcgtcattccggagtttgacacc
cccggccacactcagtcctgggggaaaggtgagccaaacctcctgactccctgctacaat
ggcaaggagccttccggcttatttggtcccgtacatcctgtgaccaactctacctatgac
ttcatgaaaaagctcttcaacgagatctcgaatgctttcccggaccattatatccacctt
ggaggtgatgaggtcagcttcagctgctggcaatcaaacccagatatcacatctttcatg
gagaagatgtcttttggaaaggattacaagaagttggagtcctactacattcaacaaatt
ctggacatcgtggcctcatacaaaaagggctacatggtgtggcaggaggtgttcgacaat
ggtgtcaagttgaagccggacacagtggtgcacgtgtggaagttcatggcggaacactac
aagcaagagatggcggacgtgacagcggcaggcttctccacgttgctgtcagcgccgtgg
tatatcaactcaatcgcttatgggcaggactggaccaaatattacgccgtcgagccactc
gacttccacggaaccgataagcagaaggagctggtggttggaggcgaggcgtgcctgtgg
ggcgagtatgtggatggcaccaatctgacccccagactctggccccgtgcaagcgcagtg
gccgaacgcctgtggagcgacaagagcgtgactgatgtgaacgacgcctacagcagactt
gcaaagcaccgctgccgcatggtccagcgtggaatagcagcccagcccctgtttgtgggc
ttttgcgacatttaa
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