Petromyzon marinus (sea lamprey): 116939970
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Entry
116939970 CDS
T09614
Name
(RefSeq) caprin-2-like isoform X1
KO
K18744
caprin-2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116939970
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116939970
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
NIT
Motif
Other DBs
NCBI-GeneID:
116939970
NCBI-ProteinID:
XP_032804979
UniProt:
A0AAJ7WP47
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All DBs
Position
7:10654729..10672146
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AA seq
961 aa
AA seq
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MIVPKPTMQEKQSATERRGIRTLTGVYESYIDNVMVYLKHKIRNLEKRKGKLDGYRERLD
SDEKLNLDQQEAVNSYQEVIGNLEFAQDVQKTFTTLNQEFQKSQRKAAHCKLLLQEESEK
RRLRTVVELQYVLEHLGNKNVRRDFTRGLHGAAMLAPVELKALDDMYSLIHPNREKDISF
DTQMKNASIHLWEFLEGKESVSDDAHNVQEVVSKVIKCGYFDKIPEYIPESSEEESEKTP
VKNNDKVNKRIHPLTPPPTPVAKSIGLNIPTHVTASPKAVKTREFVNRQYVSEVQVSQSS
EVLPSLQFESLEQRLPKRERSLATLAKESGLLLPPQPKKIAVPVKKLEIQISAPVLEIPV
LNGPLELPDATLDPKTKRQRLLDLIAQMQGTFSFMQESLIEPESDQERGAETSPVLSHQC
MAAQGIALPNVTATAGAAEEKPASLDIVQPLSPEKEMCLPFALSNHSSSNSSSPTMEMEN
HGSPLPVTQNYDSENIFHSTPNPSRPVSPNSNVDLTEVNAAPVEERERESPASASSRHSS
PKSQGYPSPAPSPLPKAVGSSVRISTDMSANAVPFTSMHSLYNSATLHGCCAFVGPPSQV
FNMSNSLQSQSEMEAEDQTQSQPTFSTSYNPGYLQPQPVTSAQLLQPSPMQPVGSYGSQV
ELVQPPPLPFQQVAATQTPFPGKTIGQSYYPSRGMSRGVRGGRAPTGGYRGSHAMYRGME
NYRTVYQALPNGIYMQPTFPAREYTGMSYRDGYGYQHGYRRVASAMHGGFRSGWSDSSQQ
SSPERVSGTFNSNDSGRGDSRSVTPVDVQVVGQPATIMPVNMYPLPQQTVRVAFSAARTV
NFTPGILDQPIVFDLIISNLGEAFDVTTGRFLCPSNGTYVFIFHILKLAVNVPLYINLMR
NDEVLVSAYANDGAPDHETASNHAVLQLVTGDNIWLRVHRGTIYGSSWKYSTFSGYLLYL
D
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgcctaagcccaccatgcaagagaagcagagtgcgaccgagagaagaggcatt
cgcacgctcacgggcgtgtatgagagctacatcgataacgtgatggtctatctgaaacac
aaaataaggaacttggaaaaacgaaaggggaaactcgacgggtatcgggagagattggac
agcgacgagaagcttaaccttgaccagcaggaagctgtaaatagttaccaggaagttatt
ggcaatttggaatttgcgcaggatgtccaaaagaccttcacgactctgaaccaagagttt
cagaaatcgcagcgcaaggccgcccactgcaagctgctgctgcaggaggagagcgagaag
aggcggctgaggaccgtcgtggagctgcagtacgtgctcgagcacctgggcaacaagaac
gtgcggcgagacttcacgcggggcctgcacggcgccgcgatgctcgcgcccgtcgagtta
aaggccctcgacgacatgtactccctgatccaccccaaccgcgagaaggacattagtttt
gacacgcagatgaaaaacgcatctatccacttgtgggagtttctggaaggcaaagagagc
gtttcagacgatgctcacaatgtgcaagaggttgtgagcaaagtgataaagtgcggatac
tttgacaaaattccggagtacatacctgagagttcggaggaagagagtgaaaaaactcct
gtcaaaaataacgacaaagtgaacaagcgcatccatccgctcactccacctccaacacct
gtcgccaaaagcataggccttaatattccaacacatgtcaccgcgtctccaaaagccgtg
aaaacaagggagttcgtgaaccgacaatatgtttctgaagttcaagtttcccagtcatcg
gaggtattaccaagcctgcagtttgaatctctggagcaaaggcttcccaaaagagaacga
tcgctcgcaacgctggccaaggaatctgggctgctgctgcccccccaacccaagaagatc
gcagttccagtgaagaagttggagatccaaatatcagcaccggtattggagatcccggtg
ctcaacggacccctggagttgccggatgcgacccttgacccgaaaacgaaacggcagcgc
ctgctggacctcatagcccagatgcagggaacttttagcttcatgcaggagtccctgata
gaacctgaaagcgatcaagagagaggtgcagaaacgtctcccgttttgagtcatcagtgc
atggcagcgcagggaattgctttgccaaacgtaacggcaaccgcaggggcagctgaagaa
aagccagccagtcttgacatcgttcaacccctttcacccgagaaggagatgtgcttgccc
ttcgccttgtcaaaccattcctcgtccaactcatccagtccaaccatggaaatggagaac
cacggctctcctctgcctgtgacccaaaactatgattctgaaaatatatttcactcgacg
ccaaacccatcgcggccagtttcgcccaactccaacgtggacttgaccgaggtgaacgct
gcccccgttgaggagcgggagcgcgagtcccctgccagtgcatcctcgcggcactcgagc
cccaagtcgcagggctacccgtcgcccgctccgagcccgctgcccaaggccgtgggcagc
tccgtccggatctccaccgacatgagcgccaacgccgtgcccttcacgagcatgcactcc
ttgtacaactcggccacactccacgggtgctgtgcattcgttgggcctccctcacaggtc
ttcaatatgagcaactcgctgcagtcccagagtgaaatggaggcagaggatcagacgcag
agccaaccaacgttctcgacgagctacaatccaggatacctccagccacagccggtcacg
agtgcacagctcttgcagccgagccccatgcagccagtggggtcgtacgggtcgcaggtg
gagctcgtgcagccccccccacttccgttccagcaagtggccgcaacgcagactcccttc
ccgggcaagacgatcggacaatcctactacccgagccgtgggatgagccggggcgtgcgg
ggaggcagagctcccactggtggctatcggggctctcacgccatgtacagaggaatggag
aattatcgcacggtgtaccaagccttgccaaatggcatttacatgcaacccacttttccc
gctcgggaatatacaggcatgagttaccgggacggctatggctaccagcacggatatcga
agagtggcaagcgcaatgcacggcggattccggagcggctggagcgactcgtcccagcag
agcagccccgagcgggtgagcggcaccttcaacagcaacgattctggccggggcgactct
cgcagcgtcacccctgtggacgtgcaggtggtgggccagccggccaccatcatgcccgtc
aacatgtaccctctcccgcagcagacggtgcgtgtcgccttctcggccgcgcgcaccgtc
aacttcacgccgggcattctcgaccagccgatcgtcttcgacctgatcatcagcaacctg
ggcgaggcgttcgacgtgacgacgggccgcttcctgtgcccctccaacggcacctacgtg
ttcatcttccacatcctcaagctggccgtgaacgtgccgctctacattaacctgatgcgc
aacgacgaggtgctcgtgtccgcctacgcaaacgatggcgccccggaccacgagactgcg
agcaaccacgccgtgctgcagctggtgacgggcgacaacatttggctgcgcgtccaccgc
ggcacgatctacgggagcagctggaagtactcgacgttctccggatacctgctgtatttg
gactga
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