Petromyzon marinus (sea lamprey): 116939994
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Entry
116939994 CDS
T09614
Symbol
PWP1
Name
(RefSeq) periodic tryptophan protein 1 homolog isoform X1
KO
K14791
periodic tryptophan protein 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmrn03009
]
116939994 (PWP1)
Ribosome biogenesis [BR:
pmrn03009
]
Eukaryotic type
90S particles
Other 90S particles
116939994 (PWP1)
Pre-60S particles
Other pre-60S particles
116939994 (PWP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
PALB2_WD40
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_RIG_1st
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
116939994
NCBI-ProteinID:
XP_032805060
UniProt:
A0AAJ7ST36
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All DBs
Position
7:11713115..11759578
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AA seq
498 aa
AA seq
DB search
MSSQITCLAWVRRGVAKETPDKVELNPDELKSLIEDARENAKSEGLDVDGIEENAEEEEA
QDVSDAAADGARAAARAQRETDELAEYRLDEYDNDEGMGGVMDSLAGLAVYANNDDDPYI
TLKDTEDDEQEDFIIKPSDNLIVTGRTAEDCCSLEIYVYNEAEDSQYVHHDIILPAYPLC
AEWLNFDPSPDSRVGNFLAVGSMKPTIDVWDLDLVDGLEPVFRLGRKKPSKKKKKTKGKK
KAASDGDSETTSEGHTDAVLDLSWNHNARNVLASASADHTVILWDLVQGKVATTLEQHTD
KAQTVEWHPFEAQTLISGSYDKSVVLYDCRSPSDSHRMWRFSGEVERVTWNHFSPFHFLA
STDDGFVYCLDARSDKSVFTLQAHEEAVTGLVLSSQVKGCLVTSSADKHVKVWDILANKP
SLVHSRDMKMGIIYCGSCSPDSPFTFAFGGQKDGLRVWDITNVKSVQTAFGSRERLLVSQ
PDVDASPSTSSDSAPMES
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccagatcacctgcctcgcctgggtgaggcgaggggtcgctaaagaaacgccg
gacaaggtggagcttaaccccgacgaactcaaaagtctcattgaagatgcacgcgagaat
gccaagagtgaggggctggacgtggacgggatcgaagagaatgcagaggaggaggaggcg
caggacgtgagcgacgcggcagcagatggcgccagagcagccgcacgggcgcagagagag
actgatgagctcgccgagtatcggctggacgagtacgacaacgacgaaggcatgggcggc
gtgatggatagcctggcgggcctcgctgtgtatgccaacaatgacgatgacccatacatc
accctcaaagacacggaggacgatgagcaggaggacttcatcatcaaaccatcagacaac
ctgatcgtgacgggcaggactgccgaagactgctgcagcctggagatttacgtttacaat
gaagcggaggactcccagtatgtgcatcacgacataatcctgccggcgtacccgctctgc
gccgaatggctcaactttgacccgagcccagacagtcgtgtcggaaatttcttggcggtc
gggagcatgaagcccaccatcgacgtgtgggacctggatctcgtcgacggactggagcct
gtgttcaggctcggtcgcaagaagccctccaagaagaagaagaagacaaaaggcaaaaag
aaggccgcttcggatggagattccgaaacgacatcggagggacacacagacgccgtgctt
gacctttcctggaaccacaacgcaaggaacgtgctggcgagcgcctccgccgaccacacg
gttatcctgtgggacctggtgcagggcaaggtggcgaccacgttggagcagcacacagac
aaggcacagaccgtggagtggcatccttttgaagcacagacgctcatctctggctcctac
gacaagtccgtggtgctgtacgattgccgcagcccgtcggacagccaccgcatgtggcgc
ttcagcggggaggtggagagggtcacttggaaccacttctccccgttccacttcctggcc
agcacagacgacggcttcgtgtactgcctggacgcgcgatcggataagtccgtcttcacc
ctgcaggcgcacgaggaggcagtcacggggctggtgctgagctcgcaggtaaagggctgc
ctggtgacctcctctgccgacaagcacgtcaaggtgtgggacatcctggccaacaagccc
agcctggtgcactcccgtgacatgaaaatgggcatcatctactgtggcagctgcagcccc
gacagccccttcacattcgcgttcggagggcagaaggatggcctgcgtgtgtgggacatc
acgaacgtgaaatcagtgcaaacggcgttcggttcccgggagaggctgttggtgtcccag
ccagatgtggatgcctctccttcaacatcctcggactctgcacccatggagagctga
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