KEGG   Petromyzon marinus (sea lamprey): 116939994
Entry
116939994         CDS       T09614                                 
Symbol
PWP1
Name
(RefSeq) periodic tryptophan protein 1 homolog isoform X1
  KO
K14791  periodic tryptophan protein 1
Organism
pmrn  Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pmrn03009]
    116939994 (PWP1)
Ribosome biogenesis [BR:pmrn03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    116939994 (PWP1)
  Pre-60S particles
   Other pre-60S particles
    116939994 (PWP1)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML_2 EIF3I Beta-prop_RIG_2nd Beta-prop_WDR3_2nd Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta WD40_RFWD3 Beta-prop_WDR41 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_Aladin WD_LRWD1 Beta-prop_WDR19_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR35_TULP_N PALB2_WD40 Beta-prop_IFT140_1st Beta-prop_ACSF4 Beta-prop_SPT8 Beta-prop_WDR75_2nd SET_TTL Beta-prop_RIG_1st Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 116939994
NCBI-ProteinID: XP_032805060
UniProt: A0AAJ7ST36
LinkDB
Position
7:11713115..11759578
AA seq 498 aa
MSSQITCLAWVRRGVAKETPDKVELNPDELKSLIEDARENAKSEGLDVDGIEENAEEEEA
QDVSDAAADGARAAARAQRETDELAEYRLDEYDNDEGMGGVMDSLAGLAVYANNDDDPYI
TLKDTEDDEQEDFIIKPSDNLIVTGRTAEDCCSLEIYVYNEAEDSQYVHHDIILPAYPLC
AEWLNFDPSPDSRVGNFLAVGSMKPTIDVWDLDLVDGLEPVFRLGRKKPSKKKKKTKGKK
KAASDGDSETTSEGHTDAVLDLSWNHNARNVLASASADHTVILWDLVQGKVATTLEQHTD
KAQTVEWHPFEAQTLISGSYDKSVVLYDCRSPSDSHRMWRFSGEVERVTWNHFSPFHFLA
STDDGFVYCLDARSDKSVFTLQAHEEAVTGLVLSSQVKGCLVTSSADKHVKVWDILANKP
SLVHSRDMKMGIIYCGSCSPDSPFTFAFGGQKDGLRVWDITNVKSVQTAFGSRERLLVSQ
PDVDASPSTSSDSAPMES
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgagcagccagatcacctgcctcgcctgggtgaggcgaggggtcgctaaagaaacgccg
gacaaggtggagcttaaccccgacgaactcaaaagtctcattgaagatgcacgcgagaat
gccaagagtgaggggctggacgtggacgggatcgaagagaatgcagaggaggaggaggcg
caggacgtgagcgacgcggcagcagatggcgccagagcagccgcacgggcgcagagagag
actgatgagctcgccgagtatcggctggacgagtacgacaacgacgaaggcatgggcggc
gtgatggatagcctggcgggcctcgctgtgtatgccaacaatgacgatgacccatacatc
accctcaaagacacggaggacgatgagcaggaggacttcatcatcaaaccatcagacaac
ctgatcgtgacgggcaggactgccgaagactgctgcagcctggagatttacgtttacaat
gaagcggaggactcccagtatgtgcatcacgacataatcctgccggcgtacccgctctgc
gccgaatggctcaactttgacccgagcccagacagtcgtgtcggaaatttcttggcggtc
gggagcatgaagcccaccatcgacgtgtgggacctggatctcgtcgacggactggagcct
gtgttcaggctcggtcgcaagaagccctccaagaagaagaagaagacaaaaggcaaaaag
aaggccgcttcggatggagattccgaaacgacatcggagggacacacagacgccgtgctt
gacctttcctggaaccacaacgcaaggaacgtgctggcgagcgcctccgccgaccacacg
gttatcctgtgggacctggtgcagggcaaggtggcgaccacgttggagcagcacacagac
aaggcacagaccgtggagtggcatccttttgaagcacagacgctcatctctggctcctac
gacaagtccgtggtgctgtacgattgccgcagcccgtcggacagccaccgcatgtggcgc
ttcagcggggaggtggagagggtcacttggaaccacttctccccgttccacttcctggcc
agcacagacgacggcttcgtgtactgcctggacgcgcgatcggataagtccgtcttcacc
ctgcaggcgcacgaggaggcagtcacggggctggtgctgagctcgcaggtaaagggctgc
ctggtgacctcctctgccgacaagcacgtcaaggtgtgggacatcctggccaacaagccc
agcctggtgcactcccgtgacatgaaaatgggcatcatctactgtggcagctgcagcccc
gacagccccttcacattcgcgttcggagggcagaaggatggcctgcgtgtgtgggacatc
acgaacgtgaaatcagtgcaaacggcgttcggttcccgggagaggctgttggtgtcccag
ccagatgtggatgcctctccttcaacatcctcggactctgcacccatggagagctga

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