Petromyzon marinus (sea lamprey): 116940034
Help
Entry
116940034 CDS
T09614
Symbol
CKAP5
Name
(RefSeq) cytoskeleton-associated protein 5 isoform X1
KO
K16803
cytoskeleton-associated protein 5
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116940034 (CKAP5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmrn04812
]
116940034 (CKAP5)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116940034 (CKAP5)
Cytoskeleton proteins [BR:
pmrn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
XMAP215
116940034 (CKAP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XMAP215_CLASP_TOG
CLASP_N
CEP104-like_TOG
HEAT
HEAT_EF3_N
TOR1L1_N
TAN
Htt_N-HEAT_1
Motif
Other DBs
NCBI-GeneID:
116940034
NCBI-ProteinID:
XP_032805162
UniProt:
A0AAJ7WPM4
LinkDB
All DBs
Position
7:complement(13973842..14004411)
Genome browser
AA seq
2066 aa
AA seq
DB search
MADDSEWMKLPVDQRCEHKVWKARLNGYEEALKIFQKLDEKSPEFSKYLGLIKKFVTDSN
AVAQLKGLEAGLIFVENANVAGKTGGEVVAGIVNKVFNQPKARAKELGMDICLMYIEIDK
PDPVQEEMLKGLDNKNPKIVVACIETFRKALCEFGSKIVQLKPIVKLLPKLFESRDKPVR
DEAKSLAVEIYRWIRDALRAPLKNINPLQLKELEDEWEKMPNTPAKQTRFMRSQQDLRMK
FEQQQTDNGDVAAGHEDEADAAPALDPYDLLEPMEILSKLPKDFYDKVEAKKWQERKEAL
EALEVLLKHPKLEPGDYGDVVRVLKKVIGKDSNVMLVALAAKCLGCLAAGLRKKFHTYAP
HVMSTLLEKFKEKKPAVVQALQEAIDEVFLTTTLQVVSEDVLAVLDNKNPSIKQQASLFL
ARSFRHCTTSTLPKSLLKPFCVALLKQTNDSAPEVRDAAYEALATALKVVGEKAVNPYLD
EVDKLKLEKIKECAEKVELVQGGKKVGGTATASKSASPSAKAGPTASAETARSTTSSRPS
GPPKKVAAAGVKPGGPPRKAAAGGKAATAKGKKGAEKQDEVEHELSTEACEEKAAAVLPP
SCLQQLDSSNWKERLASMEEFQKAVETMGKDEMPCQALIRMLAKKPGWKETNFQVMQLKL
QIVALVAQKGNFSKTSARIALEGLVDKIGDVKCGNFAKDALTAVSEACNLPWTAEEIVAM
AFGQKNPKNQSETLTWLANAIKEFGFAGVNVRAFISHVKTALSATNPAVRTSAIAILGVM
YLYMGPPLRMFFEDEKPALLNQIDAEFEKTKGQTPPAPFRGQSKRGEDASEDADGETEVD
CVMVNVQDLVTRIDICNKITPDLVTKLGDKNWKIRKEGLDEVVAILNEAKFITANIGDLP
GALKSRLNDSNKILMQQTLGILQQVATAMGPNVKQHVRSLGFPIIATLGDAKNTVRAAAL
ATLNTWVEQTGMKDWLEGEDLSEELKKENPYLRQELLGWLAEKLPDLRTVPADLALCVPY
LYASIEDRNGDVRKKAQDAVIPFMMHLGYEKMTKATGKLKASSKDPVMAVLDKCRPNVPA
KPAAKATAKSTGASASASAAPAKSGSSRPQSAPVPAEDASSVADTKRPKTAGPAAKGKAS
LGKKTASKTNLKEDEDRGGAIFIVVPNGKEQRVKEERALKVLKWNFTTPRDEYIEQLKTQ
ISSCVARWLLEELFHADFQHHNKALGIMTERMESEKDGCLSCLDLVLKWVTLRFFETNTS
VLMKVLEYLKILFLTISADGYCLTDFEANSFIPYLILKVGESKDTIRKDVRMIMNTICKV
YPASKMFVFVLDGIKSKNSKQRAECLEELGVLIDSYGINVCQPTPAKALKEIATQIGDRD
NSVRNAALNTIVVAYNLAGEQVLKMIGNLADKDMSMLEERIKRSAKKPSSGTKPTPALAA
THSNNTTVMKGRAGQEEEVPSKLKIMYRSYRIQARAGRPAATPAAQPAPPPATSREFQLD
LDDIEEDDSAPHCELPVLVQHELDDVLRPMNIPEHAIRSVSPQFDDIGGGSTASTINFVI
SQVASNEIDASIQALAQIDEVLRSEDKVEAMSGHVDQFLIATFMQLRLTYDRHLADECTN
KDDVIKLYSCIISNLATLFQTEGLSKEASVGVLKDLMHGLLTLLLDTRLEDLEDGPQVIR
SINMLLLKVLDKSDQTSILSSLIRLLQDCLATPANNSTKYCELVMKCLWRLSRLLPNIIH
TLNLDRILLDSHNFLRVFPRESWKQRKDDMPLRTIKTLLHTLGKLKGPKILDHIGMIENK
DESELENFLKRVTKHTDMEISKADMEKEKGVGKKEDKVSTAKLNDLMAEIFKKIGSKENT
RQGLENLYEFKKRYPETDLEPFLRKSSQFFQNYVERGLRIIEMERDGKVKLTPSSGTSLA
PGGGLTSSSGLVGSTGNGVTQSLPTASLSSSTTSIGSDDAVGSAVYLERLKILRQRGGLD
NSKDVTSSLVGKPGGTGFTSVGGLLGSASLASSSSSCEPLGPKLTHLREAWDREPNAATL
PPPRPIASQNLEDLKKRLEQIKANKK
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacagtgagtggatgaaattgccagttgaccaacgatgtgaacacaaggtt
tggaaagcgagactaaatggttacgaagaagcactcaagattttccagaaattggatgag
aaaagtccagagttttctaaatatttgggcttaatcaaaaagtttgtcaccgacagcaat
gctgttgcacaactcaagggcctggaggcaggcctgatctttgtggaaaatgccaatgta
gctgggaagactggtggagaagttgtcgcaggtatcgtgaacaaggtgtttaaccagccc
aaggcacgtgccaaagaattgggaatggacatctgcctcatgtacattgagattgacaag
ccagacccagtgcaagaggaaatgctcaagggattggacaacaaaaatcccaaaattgtt
gtagcttgcattgaaacgttcaggaaagcactttgtgagtttggttccaaaattgtgcaa
ctgaagccaatcgtaaaacttttgccaaaattatttgaatcgcgggacaagccagtgagg
gatgaggcaaagtcactggccgtggagatttacaggtggattcgtgatgcgttgcgagca
ccactcaagaatattaaccccctgcagctcaaagaactcgaggatgaatgggaaaagatg
cccaacacgcctgccaagcagacccggttcatgcgctctcagcaggacctcaggatgaaa
tttgagcaacagcagaccgacaacggagacgtcgccgctggccatgaggacgaagctgat
gctgcaccggctctcgatccgtacgatcttttggagcccatggagatcctctccaaactt
ccgaaggatttctatgacaaagtggaagctaagaagtggcaagagcgcaaggaggccctg
gaagcattggaggtgctgttgaagcacccaaagctcgagcctggggactatggtgatgtg
gtcagggttttaaaaaaggttattggaaaggactcgaatgttatgctcgttgcactggca
gccaagtgtttgggctgcctggccgctgggcttcggaaaaagtttcatacttacgctcct
catgttatgtctacactgcttgagaagttcaaagaaaaaaagcccgcagttgtacaagca
cttcaagaggctatagatgaagtctttcttacgacgacgctgcaagtggtgagtgaggat
gtgctggccgtgctggacaataagaatccaagcatcaagcagcaggcctccctctttttg
gctcggagcttccgccactgcacgaccagcactctgcccaagtcgctgctcaagccattc
tgcgtcgctctgctcaaacaaacaaatgactctgcaccagaagtaagagatgctgcctat
gaggccctagccactgccctcaaggtggttggggagaaggcagtcaacccttacctggat
gaggtggacaagctgaaactcgaaaagatcaaggaatgtgccgagaaagtcgaactggtg
cagggaggcaagaaagtgggcggcacagccactgcttctaagtcggcgagcccatcggcc
aaagctgggccaacggcgtcggcagaaacagcccgatcgaccacatctagcagaccctcg
ggaccgcccaaaaaggtggctgcggccggtgtcaagccaggtggtccgccaagaaaagct
gcggcgggtggtaaggctgcaactgccaagggcaagaagggggcagaaaaacaagacgag
gttgagcatgagctttcgacggaggcgtgcgaggagaaagctgctgcagtgctgccaccc
tcctgcctgcagcagctggacagcagcaactggaaggagaggctcgccagcatggaggag
ttccagaaggctgtagagacgatgggaaaagatgaaatgccgtgccaagctctcataaga
atgttggccaagaaaccgggctggaaggaaaccaacttccaagtgatgcagctgaagctg
cagattgtggcactggtggcacagaagggtaatttctccaagacatcggcccgcatcgcc
ctggagggccttgttgacaagatcggcgatgtgaagtgtggaaactttgccaaggacgcc
ctgactgccgtctcggaagcctgcaatttgccgtggactgcagaggagattgttgcaatg
gcatttggtcaaaaaaatccaaagaatcaatcggagacgttgacctggcttgcgaatgct
ataaaagagtttgggttcgctggggtgaacgtaagggctttcattagtcacgtgaagact
gcgctgtcggcaactaatccggctgtgcgaacctcagccatcgctatcctgggcgtgatg
tacctctacatgggaccgccacttcgcatgttttttgaagacgagaagccggcattgctg
aaccagatagatgccgagtttgaaaagacaaagggacagactccgcctgcccccttcaga
ggacaaagtaagcgtggggaggacgcttccgaggatgcggatggggagacggaagtggat
tgcgttatggtgaacgtgcaagatttagtaacgcggatagatatatgcaacaaaataaca
ccagacctcgttaccaaacttggggacaaaaactggaaaatcaggaaagaaggcctggac
gaagtcgttgccattttaaacgaagccaagttcatcactgccaacattggggacctgccg
ggcgccctgaagagccgtctcaacgattccaataagattctgatgcaacagacgctcggc
attctgcagcaagttgccacagcaatggggccaaatgtgaagcagcacgtaaggtcgctg
gggttccccatcatcgccacccttggggatgccaagaacacggtgagagcggcagccctc
gctaccctgaacacatgggtggagcagacgggcatgaaggattggttggagggagaagac
ttatccgaagagctcaaaaaggaaaacccttacctgcgacaggagctgctgggctggctc
gcggagaagctgccggatctccgcacggtaccggccgacctggcgctgtgtgtgccgtat
ctgtacgccagcatcgaggaccgcaatggggacgtgcgcaagaaggcgcaggatgccgtg
attcccttcatgatgcacctgggctacgaaaagatgaccaaagccactggaaagttgaag
gcttcatcaaaggacccagtgatggctgttttggataagtgtcggccaaatgttcctgcc
aaacctgctgcaaaagcaacggctaaatcaacgggggcctcggcatccgcaagcgcagcg
cctgccaaatcgggttcttcgagaccgcagagtgcccctgtgcctgcggaggacgctagc
tctgtggcagataccaaacgaccaaaaactgccggaccagctgccaagggcaaggcttcg
ttgggaaagaagacagccagcaagacgaatctgaaggaggatgaggatcggggaggagct
atatttattgtggttccaaatggaaaagaacaaagggtgaaagaagagagggcactgaag
gtgttgaaatggaatttcaccacacctcgcgatgagtacattgagcagctgaagacgcag
atttcctcgtgcgtggcacggtggctcctggaggagctgttccacgcagacttccagcac
cacaacaaggccctgggcatcatgaccgagcggatggagtctgaaaaggatggttgcctc
agctgtctggacctggtgctgaagtgggtgacactgcgcttcttcgagacaaatacaagc
gtgctgatgaaggtgctggagtatcttaagatactctttttgacgatatcagccgacggc
tactgcctcaccgactttgaggcaaactccttcatcccctacctcatccttaaggtcggc
gagtcaaaggacacaattcgcaaggatgtacgaatgatcatgaataccatctgcaaggtg
tatccagcgagcaagatgtttgtgttcgttttagacggaataaagtctaagaactcgaaa
caaagagcggagtgcctggaggagctgggagtgctcatcgacagctacggcataaacgtg
tgccagcccacgccagcgaaggccctgaaagagatcgcgacgcagattggcgaccgcgac
aactccgttcgcaacgcggcgctcaacaccatcgtggtggcgtacaacctcgctggggaa
caggttctcaagatgattggaaatctggcagacaaggacatgagcatgctggaggaaagg
atcaaacgctctgccaagaagccctcaagtggcaccaagccgactccggccctcgcagcg
acccacagcaacaacacaacggtgatgaaggggcgcgccgggcaggaagaagaggtgccc
tccaagctcaaaataatgtaccgttcctaccgcatccaagcgcgagcaggccgcccggcg
gccacgccggccgcccagccagcaccgcccccggccacctcccgcgagttccagctggac
ctggacgacatcgaggaggacgactcggctccacactgcgagctgcccgtccttgtgcag
cacgaactggacgacgtcttgcggcccatgaacatacctgagcacgcgatccgatcagtc
tctccacagtttgacgacatcggcgggggcagtacagcatccaccatcaactttgtaatc
tcgcaggtggcaagcaatgagatcgatgccagcatacaggcccttgcccagatcgacgag
gtcctgcggagcgaggacaaggtggaggccatgtcgggccatgtggaccagttcctcatc
gccaccttcatgcagctgagactcacctatgacaggcacctggccgacgagtgcaccaac
aaggacgacgtcatcaaactctacagctgcatcatcagcaatcttgccacactcttccag
acggagggcctctcaaaggaggcatcggtgggcgtgctcaaggacttgatgcatggcttg
ctgacgctgctgctggacacgaggctggaggacctcgaagatggaccacaggtcattcgc
tccatcaacatgctgctgctgaaggtgctcgataagtccgaccagacgagcatcctcagc
tcgctgattcggctcctgcaggactgcctcgcgactccggcaaataattccacaaagtac
tgcgagcttgtgatgaagtgcctgtggcgtctgtcacggctgctgcccaacatcatccac
accttgaatttggaccgcatcctgctggactcgcacaacttcctcagggtgttcccgcgt
gagtcgtggaagcagcgcaaggacgacatgcctctgcgcaccatcaagacgctgctgcac
acactgggcaagctcaagggacccaagatcctggaccacatagggatgatcgagaataag
gatgagtcagagctggagaacttcctgaagagggtgaccaagcacacggacatggagatt
agcaaggcagatatggaaaaggagaagggagttggcaaaaaagaggacaaagtgtccacg
gcgaagctcaacgacctgatggcagaaattttcaagaagattggttccaaagaaaacacc
agacagggcctggaaaacttgtacgagtttaagaagaggtaccccgagacggacctggag
cccttcctgcgcaagtcctcccagttcttccagaactacgtggagaggggactgagaatc
atcgaaatggaacgggacggcaaggtcaaactgacgccctcgtctgggacctctttggct
ccgggcggcgggctgacgtcatcgtcggggctcgtgggttccacgggaaacggagtgacc
cagtcgctgccgacggcatcgctctcctccagcacgacgagcattggcagtgacgacgcc
gtcggctccgccgtctacctggagcgccttaagatcctgcggcagcggggcggccttgat
aactccaaggacgtgacctccagcttggttggcaagccgggcgggacggggtttacgtcc
gtcggcggcctcttgggcagcgcctcgctggcatcgtcgtcctcctcgtgcgagcccctc
ggccccaagttgacgcacctgcgcgaggcgtgggaccgggagcccaacgccgccacactc
ccaccgcccaggcccatcgccagccagaacctggaggacctcaagaagaggctggagcag
atcaaagcgaacaagaagtag
DBGET
integrated database retrieval system
