Petromyzon marinus (sea lamprey): 116940049
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Entry
116940049 CDS
T09614
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33-like isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pmrn01001
]
116940049
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116940049
Enzymes [BR:
pmrn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116940049
Protein kinases [BR:
pmrn01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
116940049
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116940049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
MVD-like_N
Motif
Other DBs
NCBI-GeneID:
116940049
NCBI-ProteinID:
XP_032805195
UniProt:
A0AAJ7STC5
LinkDB
All DBs
Position
7:15907860..15958769
Genome browser
AA seq
1438 aa
AA seq
DB search
MDDVVLVSVTGANGEIAVPVLVGPEHNHHHHSNHLNQHPQLRLLLHSQHEQETRDGGGGS
SQSDAGPRGDDKDRASDEQAALSAGPTLTADPAGSQTKAASEAAGPAGPEHDAEKASDGD
NNNIIIVNNNNNSGGDNNSSSGKEEDGRSSSSNNKEEAVPGEEVALLQPAPPPPPLNLLE
SCAACGQGLQRREPKLLPCLHSLCAVCVPPPQPHIPVPMAGPVMNGQPHQQPHHQQQQHP
QQQQQHPQQHPQHHQQQQQHHQQQQPPSPVGPMSVQAIVRCPICHQGCQPKDIVDNYFVT
DGSEGVAGTENSSQPCTSCDDGADAEGFCVECLEWLCRTCIEAHQRVKFTKDHAIRRKDD
AQDDAAGMATLRPVYCPVHRREPLKLFCETCDRLTCRDCQLLGHKEHRYQFVEEASQQQV
VIIETLTAKLQEKKNYVHFAAMQVQNRLNEVVEAHKKVEHDIRVAVFTLVNEINKRGKSL
LQQLESVTRERQAKLGRQRDEIGELARHVEHVLSFARFAVASGNSTALLYSKRLVTYQLR
AILRARCDPAPVASSGVKFHCDSSFWAKNVLNLGTLVVENPPPGAVHAFLPNIALAQAGR
PPPGTVPHMPPSPSAPGPPLPASLAGPGGPMRQQASGGGPPLQPLPPGPPGSGQINLAQL
RLQHLQQRAIKQHQQHQQQQQQHQHQQQQQHQLQQQHQQQQQQQQQQQQQQQQQQQQQQQ
QQQLRLVARPQPLQPHRRVSSSASVAAATALAAGQPAFATLSPTNGGQPPRLISLQSFHR
ATQHLSATQARAVAQGGGSVRIGGQQQQQQPPGPQQQQPQQQQQQRAPQGPPQNPAHSLR
QHPGSSVPLGVPFPVFEDVSSVLKLAAVHANGALADGVPSPAPRLTSPGFSISPGSAMHS
PVTVASQTPIRPSSASSTGSHGSSASPKVPYVRLERIKHEPGTALAERGSACGGQQQQQH
HHHHALASATPATAAPSASANSVSVKQEAALGGGGAAGSACCVLSSPDSILTPPLSNPSC
ESLPIHAVRVKEERLDGADYAAGSTPHCGAGPGHSPRRHSQPDSTTGLPGHRSAEGTGRG
ASGADSSSALRRGDEGAGSDGAGGGDDAAQEPAPEQMTEGAGCDCAVCGADAPVLACAEC
GGRYHLTCHVPVLSEHPGGDWRCGLCRGPDCEEDAAETARDGVTAGERRRCEVLLLSVLC
RITSEPSAPCTGVSEAEKQMNGTEAGSDGGSGGDGGDAPLPCWLDAVRQRLQPDSPEPYG
SPEEFVSALRSGLRSHRDHRALEAHVTDRLGELFPALSGTHGTCGADAAEDAGADPAAAE
AADAAGVCPDGLATVDTAEACGDVGAGTGEDAGTSGTVDASADVGGASADVGGALDADVG
AGADVVEDAEVEVETAEAAEDVSAGDGGAGGGGDGDSDVECGEPKSKRARLDPAEPGP
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtggtgctggtcagcgtgaccggggcgaacggagaaatcgccgtgcccgtc
ctagtgggccccgagcacaaccaccaccaccacagcaaccacctcaaccagcatccgcag
ctgcggcttctcctccactcccagcacgagcaggagacgagagacggcggcggcggcagc
agccagagcgacgcggggccgcgaggagatgacaaagacagggcctctgatgagcaggcc
gcattatccgcgggccccactttgacggcggaccccgcgggctcccagacaaaggcggcc
tccgaggcggccgggcccgcggggcctgaacacgacgcggagaaagcgtctgacggtgac
aacaacaacatcatcatcgtcaacaacaacaacaacagcggcggcgacaacaacagcagc
agcggcaaggaggaggacggcaggagcagcagcagcaacaacaaagaggaggctgtgccc
ggcgaggaggttgctctactacagccagcacctcctcctcctcctctcaatctcctggag
tcttgcgctgcctgtggccagggcctccagaggcgggagcccaagctgctgccatgtcta
cactccctgtgcgccgtgtgcgtgccaccgccgcagccgcatatccccgttcctatggcg
gggccggtcatgaatggacagcctcaccagcagccccaccaccagcagcagcagcatccg
cagcagcagcagcagcatccacaacagcatccacagcaccatcagcagcagcagcaacat
catcagcagcagcagccgccttcgcctgtagggcccatgtcagtgcaagccatcgtgcgc
tgcccaatctgccaccaaggatgccagcccaaggacatcgtggacaactactttgtgacg
gacggctcagagggagtggcgggcacagagaacagctcgcagccgtgcacaagctgtgac
gacggtgcggacgccgaggggttctgcgtggagtgcctcgagtggctgtgccgcacgtgc
atcgaggcccaccagcgcgtcaagttcaccaaggaccacgccatccggcgcaaggacgac
gctcaggacgatgcggcgggcatggccacgctgcggcccgtctactgccccgtccatcgc
cgggagccgctgaagctcttctgcgagacctgcgaccgcctcacctgccgggactgtcag
ctgctgggacacaaggaacacaggtaccaatttgtggaggaggcttcgcagcagcaggtg
gtgattatcgagacgcttacggccaagctgcaggagaagaagaactacgtgcattttgcc
gccatgcaggtgcagaacaggctgaatgaggtcgtggaggcccacaagaaagtggagcac
gacatccgggtggccgtcttcacgctcgtcaacgaaatcaacaagaggggcaagtcgctg
ctgcagcagctcgagtcggtgacacgtgagcggcaggccaagctaggccgccagcgggac
gagattggcgagctggcacggcacgtggagcacgtcctcagctttgcacgcttcgccgtc
gccagcggcaacagcaccgccctgctctacagcaagcggctggtgacgtaccagctgcgt
gccatcctaagggcgcgctgcgacccggcacccgtggccagcagcggcgtcaagttccac
tgcgattcctccttctgggccaagaacgtcctcaacctcggcaccctggtggttgagaac
cctcctcccggggcggtgcacgcgtttctgcccaacatcgcgcttgcgcaggcaggccgg
ccgccccccggcaccgtgccccacatgccgccctccccctccgcgccgggcccccctctc
ccggcctcgctcgcggggccggggggcccgatgcgtcagcaggcgtcaggaggaggaccc
cccctgcagcccctgccaccgggcccgccgggctccgggcagatcaacttggctcagctc
cgtctgcagcacctgcagcagcgggccatcaagcagcatcagcagcaccagcagcagcag
caacagcatcagcatcaacagcaacagcagcatcagctgcagcaacaacaccaacagcag
cagcaacagcagcagcaacagcagcaacagcagcagcaacagcagcagcagcaacagcag
cagcagcagcttcgtctggtggccaggcctcagccattgcagccccaccgcagagtttct
tcgtctgcgtccgtggcggccgctaccgcccttgctgccgggcagccggccttcgccact
ctctctccgaccaacggcgggcagccaccgcggctcatcagcctgcagtccttccaccga
gccacgcagcacttgtcggccacgcaagctcgcgccgtcgcccaaggcggcggcagcgtc
cgcatcggggggcagcagcagcagcagcagcctccgggaccacaacagcagcagccgcag
cagcagcagcagcagcgggcaccacaggggcccccgcaaaacccggcacactcgctccga
cagcaccccggcagcagtgtccccctcggggtccccttccccgtgtttgaggacgtgtca
tcggtgctgaagctggcggcggttcacgccaacggggccctagcggacggtgtgcccagc
cccgcgccccgcctcacctcccccggattctccatctccccggggtccgccatgcactcg
cccgtgacggtggcgagccagacgcccatcaggccttccagtgcctccagcactggcagc
cacggcagctccgcatcccccaaagtcccatacgtgcgcctcgagcgaatcaagcacgag
cccggcacggcgctcgccgagaggggctcggcgtgcggggggcagcagcaacagcagcac
caccaccaccacgcgttggcatcggcgacccccgcgaccgctgcgccctccgcgtccgcc
aacagcgtgagcgtgaagcaggaggcggcgctcggcgggggcggcgccgccgggagcgcc
tgttgcgtgctgagcagccccgacagcatcctcaccccgccgctgtccaacccgagctgc
gagtcgctccccatccacgccgtgcgcgtcaaggaggagcggctcgacggcgccgactac
gcggcgggctccactccgcactgcggcgccgggcccgggcactcccctcgccgacacagc
cagcccgactccaccaccggcctgcccggacaccgcagcgccgagggcaccggccggggt
gccagcggcgcggacagcagttccgcgttgcggagaggagacgagggcgcggggagcgac
ggggccggcggcggggacgatgcggcgcaggagccggcgccggagcagatgaccgagggc
gccgggtgcgactgcgcagtgtgcggtgcggacgcccccgtgctggcctgcgcggagtgc
ggggggcggtatcacctgacctgtcacgtgcccgtcctctccgagcatcctggcggggac
tggcgctgtggcctgtgccgcggcccggactgcgaggaagatgcagcggagacggcgcgg
gacggtgtgacagccggcgagcggaggcgctgcgaggtgctgctgctgtcagtgctgtgc
cgcatcaccagcgagcccagcgctccgtgcaccggcgtctcggaagctgaaaagcaaatg
aatggcacggaagctggtagcgacggaggcagcggtggcgatggtggcgacgctccgttg
ccgtgctggctggacgcggtgaggcagcgactccagcccgactccccggagccgtacggc
agccccgaggaatttgtgtcggcgctgcgctcgggcctgcgctcacatcgggaccaccgc
gcgctggaggctcacgtcacggaccggcttggggagctgttcccggcgctgagcgggacg
cacggcacgtgcggcgcagacgcggccgaggacgccggcgcggaccccgcagcagcggag
gcggcggacgctgccggcgtgtgcccggacgggctcgcgaccgtggacacggcagaggcg
tgcggggacgtgggcgccgggacgggcgaagacgccgggacgagcggcacggtggacgcg
agcgcggacgtgggcggcgcgagcgcggacgtgggcggcgcgctggatgcggacgtcggc
gccggagccgacgtggttgaggacgccgaagtggaggtggagacggcggaggccgccgag
gacgtctcggcgggcgacggcggcgcgggcggtggaggcgacggggacagcgacgtcgaa
tgcggcgaaccgaaatccaagcgcgccaggctggatcctgccgaaccgggcccctag
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integrated database retrieval system
