Petromyzon marinus (sea lamprey): 116940050
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Entry
116940050 CDS
T09614
Symbol
PPFIBP1
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116940050 (PPFIBP1)
Membrane trafficking [BR:
pmrn04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116940050 (PPFIBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
HEPN_Cthe2314
FxsA
Motif
Other DBs
NCBI-GeneID:
116940050
NCBI-ProteinID:
XP_032805197
UniProt:
A0AAJ7SUW8
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All DBs
Position
7:15854945..15904740
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AA seq
1032 aa
AA seq
DB search
MSDASEMLAAALEQMDGIIAGSKGMEYGNGLFDCQSPVSPYGGTMSSLGGLRVLQLVEEL
RGALDAVGGEDDRETLRSQIPDSTIDTLADWLHCGMTNGHLQYGGAESYQERLSRLEGDK
ESLVLQVSVLTDQVEVQGEKIRDLEVCLDEHRDKLNATEDMLEQQELLSRTSLETQKLDL
MAEISSLKIKLASVERDRSEFMDRSCDGEDFMHEIAELRRRVVELEGEKVHFEKKLKNTK
SAMAKLASMKLKIGQVQYERQHWERECLQAKVELDELQELLMQREVEVEGLKDQLVNQMT
EQAETIEKEEELKRMLRDRHQEIHRLKVAMESLMAANEDKDHMIDDLRQSLTRYRKVQEM
VLAAKGKKGSSEQLPGSSSDDNLSAEMMNMDAEEFLAEESFGIQKDAAPPADTEPEQQLQ
IKADDVETVDYPTENGDAQKGEDSDEAVQEMAPQPASRSRDWQAASSPEHVQQDVAEKSV
VWERKGREPAELAQRLEVIIQNKALQEEEGGSRLQTLPPSSPSSPALERHLADEGASGGA
ARKPRASFGRGFFKVKGGKRTASAPNLEVDKDSSGRLSPSELASPPSAPLSPETRKKSRG
IKKIFGMLKRSQSTNLNPEEEREEEFRRGGLRATADPRLGWSRDLRGGSSDLDAPFAKWS
TDQVCNWLHEQGLGMYVGMARQWVTSGQTMLRATAHDLDKELGIKHSLHKKKLQLALQAM
GSEEENSKGELDYNWVTRWLDDIGLPQYKDQFNEGRVDGRMLHYLTVDDLLSLKVTSLLH
HLSYKRAIQVLRMNKFHPNCLRRRPSDEGNVTPAEVTQWTNHRVMEWLRSADLAEYAPNL
RGSGVHGGLLVLEPRFTVETLALLLNIPPNKTLLRRHLATHFDLLVGPDSRRHKQEALEV
PNHIPLTATAKVKPKKLPLGISGFGSLRRRKQEDAEDYVCPMELCRPGGLASQPGFSAAS
SYRMQAGGGRSGFQDDDDLDRLEQQMEDSEGTVRQIGAFSEGINNLTSMLSDDDMFMEYA
STSPNAPHLDNE
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgccagtgagatgctggctgctgcccttgaacagatggatggcatcatcgca
ggctcgaagggcatggagtacggcaatgggcttttcgattgccagtctcccgtgtctcca
tacggcggcaccatgagctcgctgggcggcctgcgcgtgctgcagctggtggaggagctg
cgtggagcactggacgcggtgggaggagaagatgacagggagacgctgaggtcacagata
ccggactcaaccatcgacaccctcgcggactggctgcactgcggcatgaccaatggccac
ttgcagtatggtggcgcggagagctaccaggagaggctgtctcgtttggaaggagataag
gagtctcttgtgctgcaggtgagtgtcctgacggatcaggtggaagtccagggagagaag
atcagggatctggaggtgtgtctggacgagcacagggacaagctcaatgccaccgaggac
atgctggagcagcaggagctgctaagccgcacatcactggagacccagaagctggatctg
atggccgagatttcgtctctcaagataaaactcgcctctgtggagagggacagaagcgag
tttatggataggagctgtgatggagaggattttatgcacgagatagctgagctgcggaga
agggtggtggagctggagggggagaaggttcactttgaaaagaaactgaagaacaccaag
tctgccatggccaagctggccagcatgaaactgaaaatcggacaggtacaatacgagcgg
cagcattgggagcgagagtgcttgcaagccaaggtggagctggacgagctgcaggaactg
ctgatgcagcgtgaggtggaggtggagggactcaaggaccagctcgtcaaccagatgacg
gagcaggccgagaccatcgagaaagaggaggaattaaaacggatgctgagagacagacat
caagaaatacaccggctaaaggtggcgatggagtcactgatggctgccaatgaggacaag
gaccacatgatagacgatctgcggcagtccctgacgcgctacaggaaggtgcaggagatg
gtgctggccgccaagggtaagaaagggtcttctgagcaactgccgggcagttcaagcgac
gataacctgagcgcggagatgatgaacatggacgcggaggaattcctggccgaggagagt
tttggcattcagaaagatgccgccccgcctgctgacacagagccagagcaacaactgcag
atcaaagcggatgatgtagagacagtggattatcccactgaaaatggagacgcacagaag
ggagaagatagtgatgaggctgtgcaggagatggcaccgcagccggcatccaggtcacgt
gactggcaggccgccagcagccctgaacacgtccaacaagacgtcgcagagaagagtgtg
gtgtgggagcggaagggacgcgagcctgccgagctggcccagcgccttgaagtgataata
cagaacaaggcgttgcaggaggaggaaggagggtcccgcctgcagaccctgccccccagc
tcccccagctcccccgcgctggagcggcaccttgccgacgagggggccagcgggggggcg
gctcgcaaacccagggcctcatttgggcgtgggttcttcaaggtgaagggaggcaagcgc
acggccagcgcgcccaacctggaagtggacaaggactcaagtggtcggctcagtccctcg
gagctcgcctcccctcccagcgctccgctctcgcccgagactcggaagaagtcgcgtgga
atcaaaaaaatcttcggaatgctgaagaggagccagtcgacgaacttaaaccccgaggag
gagcgcgaggaggagttccgaagaggggggctgagagccacggccgacccgcggctgggc
tggtcacgtgacctccgtgggggctccagcgacctggatgcgccatttgccaagtggtca
acggaccaggtgtgcaactggcttcacgagcaaggcctgggcatgtacgtgggcatggcg
cgccagtgggtcacctccgggcagacgatgctccgcgccaccgcacacgacctggacaag
gagctgggcatcaagcactcgttgcacaagaagaagctgcagctggccctgcaggcaatg
ggctcggaggaggagaactccaagggcgaactcgactacaactgggtcacgcggtggctg
gatgacatcggcttgccacagtacaaggaccagtttaacgaagggcgagtggacgggcgc
atgctgcactacctgacggtggacgacctcctgtcactgaaggtgacgagcctgctccac
cacctgagctacaagcgcgccatccaggtgctgcgcatgaacaagttccaccccaactgc
ctgcgccgacggccctccgacgaggggaacgtgacacccgctgaggtgacgcagtggacg
aaccaccgtgtgatggagtggctccgctcggccgacctggcggagtacgcgcccaatctg
cgtggcagcggcgtgcacggcgggctgctggtactggagccacgtttcacggtggagacc
ctggccctgctgctcaacatcccgcccaacaagacgctgctacgacgccacttggccaca
cacttcgacctcctggtcggacccgactctcgccgccataagcaggaggcgcttgaggtg
cccaaccacataccgctcaccgccacggccaaggtgaagcccaagaagcttcctctgggg
atctcgggattcggctctctgaggcgacggaagcaagaggacgcagaggactacgtgtgc
cccatggagctctgccggcccggtggcctggcctcccagccaggcttctccgccgcctcc
agttaccggatgcaggccggcggcgggcggtccggcttccaggacgacgatgacctcgac
cggctggagcagcagatggaggactctgagggcaccgtgcgccagatcggagccttctca
gagggcatcaacaatctgacgagcatgctgtcggacgatgacatgttcatggagtacgcg
tcaacgtcacccaacgctccacacctggacaacgaataa
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