Petromyzon marinus (sea lamprey): 116940179
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Entry
116940179 CDS
T09614
Symbol
XRCC4
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
116940179 (XRCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116940179 (XRCC4)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
116940179 (XRCC4)
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Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
HTH_15
XLF
Motif
Other DBs
NCBI-GeneID:
116940179
NCBI-ProteinID:
XP_032805446
UniProt:
A0AAJ7WPL5
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Position
1:29333491..29385646
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AA seq
453 aa
AA seq
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MRVAPEIAGRGGQLRAGDVCKLVWPMEESPRRGRVREGRGAREAELIDRARGRILGQHTM
GEEGEVIRLHLSSDPGSTYYALVTWKKNSHQGLNLSLTDCRTAWTGEVTGSTLEEEASEA
GLSLVDYVAELRAALPGHCWDSPSNGDAFRYDLKPPASPGHARRRCFSICKVHSDVTFEL
GTVELRELDEPVTLVRQLLDRGLEGGRRLRQRNDELHRDNERLAAERGRAVEELRASVNN
KEELERDLYGKFIRVLNEKKEKIRRLKDALDKHAPAQVPPPCASAGGVVGGSSAARAAEG
TDESDYGGSTDEERQAPATGTAPPKAAKAPSTAAVTRQEGERRGAVTAFDPYDDDDDDDG
ASVGGMDAGAGPTRRQRKRRGHQQVTATETPAAAVLPPPAKAKPANESRPARRGEAQPEP
TTASRQSLRKAARGGGGSGGGNSDDTLELLYDF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtagctccggagattgcggggaggggggggcagctccgcgctggggacgtctgt
aagttggtctggccaatggaagagtcgccccgtcgcggacgagtccgggaggggagggga
gcgagggaggcggagctcatcgacagggcgcgcggcagaatcctcgggcagcacacgatg
ggcgaggagggcgaggtgatcaggctgcacctgtcatctgacccggggagcacttactac
gccctcgtgacctggaagaagaacagccatcagggattgaacctgagcctcaccgactgc
cggacggcctggacaggggaagttaccggctccacactggaggaggaggcgtcggaagcc
gggctgtcgctcgttgactacgtcgccgagctccgggctgccctcccgggccactgctgg
gactcgccctccaacggagacgccttccgctacgacctgaagccccccgccagccccggg
cacgctcgccgcaggtgtttctccatctgcaaagtgcacagcgacgtcacgttcgagctg
ggcacggtggagctgcgcgagctggacgagccggtgacgttggtgcggcagctgctggac
cgcgggctggagggcgggcgccgcctgcgacagcgcaacgacgagctgcaccgcgacaac
gagcggctcgccgcggagcgcggccgtgccgtcgaagagctgagggcgtccgtgaacaac
aaggaggagctggagagggacctgtacggaaagttcatccgcgtcctcaacgagaagaaa
gagaagattcggcggctcaaggatgccctggataagcacgccccggcccaagtgccccct
ccctgcgccagcgccggcggcgttgttggtggcagctctgcggcccgggcggcggagggc
acggacgagtctgactacgggggcagcaccgacgaagagaggcaggctccggctaccgga
accgcccccccgaaggcggcgaaagccccgagcaccgcggccgtaacccggcaggagggc
gagcgaagaggtgccgtcacggcttttgacccgtacgacgacgacgacgacgacgatggc
gccagcgtcggcggaatggacgccggcgcgggccctaccaggaggcagcgcaagcgacgg
ggccatcagcaggtgacggcgacggagacgccggcagcggcggtgctgccgccgcccgcc
aaagccaagccggccaatgagtccaggccggcccgtaggggcgaggctcaaccggagccc
accaccgcatcccgccagagcctccggaaggccgcacgcggcggcggcggcagcggcgga
ggcaacagcgacgacaccttggagctgctgtacgacttctag
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