KEGG   Petromyzon marinus (sea lamprey): 116940198
Entry
116940198         CDS       T09614                                 
Symbol
BICC1
Name
(RefSeq) protein bicaudal C homolog 1 isoform X1
  KO
K18756  protein bicaudal C
Organism
pmrn  Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmrn03019]
    116940198 (BICC1)
Messenger RNA biogenesis [BR:pmrn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     116940198 (BICC1)
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 SAM_1 SAM_2 KH_Vigilin KH-I_KHDC4-BBP KH_Mug60-KHD4 TFIIA SAM_Ribosomal_mS41 KH_N4BP1_2nd
Other DBs
NCBI-GeneID: 116940198
NCBI-ProteinID: XP_032805492
UniProt: A0AAJ7WPY7
LinkDB
Position
8:complement(4006024..4106383)
AA seq 1153 aa
MSPVQYQLTMAAQQSHSQQQQQPELDSSSPPPLAMPVRPEQQQQQQLQQQQFQQQQHNHV
YGERCCDSPASPPESEAAEGACSPELDTDPAFLDPDAAEERFRVDRKKLEAMLQAAVEGK
GESGEEFFQKIMGETNTHITWPSKLKIGAKSKKDPHIKVCGKRDNIRDAKEKIMAVLDTK
SNRVTLKMDVSHTEHSHVIGKGGANIQRVMANTGCHIHFPDSNRGSQAEKSNQVSIAGLP
GGVEEARAFIRELLPLALMFEVPMTGFLQPVSEASSPAIAHIAQRHGLNVAFKQRARLYG
TVCVARGSNVSTTKEGVAMLIEHLTGSPGATFPVSSQLDVAPQHHQFMMGRNGLNVKRIV
HRTGAQIQFPEPGGPHKAIHIHGNMEAVCLARTCLLGCLPLVLMFDMKEDAEISSHNMAQ
LMEHLDVFISIKPKPKQPSKSVIVKSMERNAGNVYEARRLLLGLENNGIPVPANGLLNPK
MSCPVTLATNATYPLQASGLDILASAGLGLSTIESWLCASTTAACTQQPPVLKSCAEAAS
MLSPGALSVATNSALLNILNAQLSPVGTQGSGPPQSTPMWTVSPPGFPALPPVVLSPATQ
AALTGMLLGGGMTSYGTPSHRMPSPPPGLSPPTPHALHHHHHQAALASVQAAASSSAATR
GAGELVGFNSPSGAASAQGMPSTQQGVGGARTFRAVAEQGGAATSLGLSTRPSQSIAVGL
AHGESGGVTNCRMARAKSHGDTGDGGGQGPTKLTPNTSLNGHIKQQPSERAAGCQKRECV
VLSGSRGQLSPKSNTRRETEEAYVEVGMPRSPSHSASSHELQQSLSRARVLHQQHQQQQQ
QQQHMQAHAQAQERRVSSTEGDHRDLHTDKRAPGSEWAAERSCADGFRLAPHSPYSSAVE
AADYEQKKLMATKAMQKKPVVTEVRTPTSQWSGLGFSKSMPAETIKELRRPNHGSFKPSM
PTTFEGDALSECGSESENWRERNGHDSSSGTEFPTSGSSPKRKASVKSYEHYLSSSGYME
SMPRTPTGIASTGCSMGSAIKGNGGGGGSGSSSSGSSDLPELFSKLGLGKYTDIFQQQEI
DLQTFLSLTDQDLKELGISTFGARRKMLLAISDLNKSRRKLFDYPLRSAFLEGGASGRLP
RHQSELATQSGRW
NT seq 3462 nt   +upstreamnt  +downstreamnt
atgtcccccgtgcaataccaactgacgatggccgctcagcagagtcactctcaacagcag
cagcagccggagctcgacagttcttcaccccctccgcttgccatgccggtccgtccggag
cagcaacagcagcagcaacttcaacagcagcagtttcagcagcagcagcataaccacgtg
tacggcgagcgctgttgcgattccccggcgagtccccccgagagcgaggcggccgagggc
gcttgcagccccgagctcgatacagatccggcgttcctcgaccccgacgcggccgaggag
cgatttcgcgtggatcgaaagaaactggaggccatgctgcaagctgctgtggaagggaaa
ggagaaagcggagaggaattcttccaaaagataatgggagaaactaacactcacatcacg
tggccctcaaagttgaaaatcggagccaagtcaaaaaaagatcctcacatcaaagtctgc
ggcaagagagacaacatcagggacgccaaggagaagataatggcagtgctcgacaccaag
agcaaccgggtgactctgaaaatggacgtgtcccacacggagcactcgcacgtcatcggc
aaaggtggcgccaacattcagcgcgtcatggccaacacgggctgccacatccactttcct
gactccaaccgcggcagccaggccgagaagagcaaccaggtttccattgcggggttgcct
ggaggagtggaggaggcgcgcgcctttatccgggagctgctgccactggcgctgatgttc
gaggtgcctatgacagggttcctgcagcccgtgtcggaggccagctctccagccatcgct
cacatcgcgcagcgccacggcctcaacgtggccttcaagcagcgcgcacgcctctacggc
accgtgtgcgtggcgcgcgggtccaacgtcagcaccaccaaggagggcgtggcgatgctc
atcgagcacctcactggcagccctggagccacctttcctgtgagctctcagctggacgtc
gccccgcagcaccaccagttcatgatgggacgtaatggcctcaacgtcaagcgcatcgtg
caccggaccggtgcgcagatccagttcccggagcccggtggcccgcacaaggccatacac
atccacggcaacatggaggccgtgtgcctggcccgaacctgcctgctgggctgcctgccg
ctggtgctcatgttcgacatgaaggaggacgcggagatctcatcgcacaacatggcgcag
ctgatggagcaccttgacgtcttcatcagcatcaaacccaagcccaagcaaccgagcaag
tcggtgattgtgaagagcatggagcggaatgcgggcaacgtctacgaggctcgccgtctg
ctgctaggcctggagaacaatggcatccccgtcccggccaatggccttctcaaccccaag
atgagctgcccggtcaccctggcaacgaatgcaacatacccactgcaggcctcaggcctg
gacatcctcgcctcagctggactggggctgtccacgattgagagctggctatgcgcaagc
accacggccgcctgcacacagcagcctcctgttctcaagagctgtgccgaagctgcctcc
atgctgagccctggggccctgagtgtggccaccaacagcgccctgctgaacattctcaat
gcccagctgagcccagtggggacccaggggtccggccccccgcagagcacccccatgtgg
accgtgtcacccccagggttccccgcactgccccccgtggtgctgtcgccagccacgcag
gcggcgctcaccggcatgctgctggggggcggcatgaccagctacgggacaccgtcgcat
cgcatgccctctccgcctccgggcctgagccccccgacgccgcacgccctccaccaccac
caccaccaggcagcgctggcttccgtgcaggcggctgccagtagctcggcagccacgcgt
ggcgccggcgaactcgtgggctttaactcgccgtccggggcagcgtcggcgcagggcatg
ccctcaacgcagcaaggcgtcggaggcgcgcggacgttcagggcagtggcggaacaaggt
ggggcggcgacgagcctcggtctctccactcggccgtctcagtccatagccgtgggactg
gctcacggggaaagcggcggcgtgaccaactgcaggatggctcgcgcgaaatcgcacggg
gacacgggagacggcggcgggcaggggcccacgaagctcacgccgaacacctctctcaat
ggccacatcaagcagcagccgtccgagagagcggcgggttgtcagaagcgggagtgtgtc
gtgctgtctggctcacgaggccagctgtctcccaaatccaacacccgacgagagacggag
gaggcgtacgtggaggtggggatgccgcgcagcccgtcccactcggccagcagccacgag
ctgcagcagagcctctcccgggctcgtgtgctgcaccagcagcaccagcagcagcagcaa
cagcagcagcacatgcaagcacatgcgcaggctcaagagcggcgagtgtccagcacagag
ggcgatcacagggatctgcacacggacaagagagcgccgggcagcgaatgggcggcggag
agatcatgcgccgacggcttcaggctggcgccgcactccccctactcctctgctgtggag
gccgctgactacgagcagaaaaagctaatggcgacaaaagccatgcagaagaagccggtg
gtgacggaggtgcggacacccacgagccagtggagtggcctcggcttctccaagtccatg
ccagccgagaccatcaaggagctgcgacggccgaaccacgggtccttcaagccgagcatg
cccaccactttcgagggagatgcgttgtcggagtgcgggagcgaatcggagaactggcgg
gagcggaacggccacgactcctcatcagggacggagttccccacgagcggcagcagccct
aagcgcaaggctagcgtcaagtcgtatgagcactacctgagcagcagtggctacatggag
agcatgccgcgaactcccacgggcatagctagcactgggtgctccatgggttcggccatc
aaggggaacggcggcggcggcggcagcggcagcagcagcagcggcagctccgacctcccc
gagctctttagcaaactgggcctgggcaagtacaccgacatattccagcagcaggagatc
gacctgcagacattcctgtcgctgaccgaccaagacctcaaggagttgggcatcagcacg
ttcggcgctcgacgcaagatgctcctcgccatctccgacctgaacaagagccggaggaag
ctctttgactacccgcttcgctccgccttcctggagggtggtgccagcggacggttacca
cgacaccagagtgagctggccactcagagtggccgctggtga

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