Petromyzon marinus (sea lamprey): 116940214
Help
Entry
116940214 CDS
T09614
Name
(RefSeq) STAM-binding protein-like
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116940214
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmrn01002
]
116940214
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116940214
04121 Ubiquitin system [BR:
pmrn04121
]
116940214
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116940214
Peptidases and inhibitors [BR:
pmrn01002
]
Metallo peptidases
Family M67
116940214
Membrane trafficking [BR:
pmrn04131
]
Endosome - Lysosome transport
Others
Others
116940214
Ubiquitin system [BR:
pmrn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
116940214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP8_dimer
JAB
Prok-JAB
TPR_12
Motif
Other DBs
NCBI-GeneID:
116940214
NCBI-ProteinID:
XP_032805549
UniProt:
A0AAJ7WPN7
LinkDB
All DBs
Position
8:4576141..4596812
Genome browser
AA seq
415 aa
AA seq
DB search
MDGSSSPEERVRVLSQKGSQVEVRDSIPPQRYFRSGKEMLRMATVYHEEGNLEEAFMLYT
KYITLFVEKLPKHQDYKIVSLPLKADTTKKLKTVFPLAENVKKKLKATYAKEHNMYLEKQ
GELAAERAREQERAREVEEERRRLAQMQRQQQEQQAFHAFEETLRQREREKERLAVLHRF
GSEDHDDAVPGAAAAAAAGPGVLIQGLKPPPTDGRPPPAAPGGPPAVDRSCKPASLVSPA
RDNERKVVVPSNLCEKFLAQVSENTARAVETCGILCGRMVQGVFTVTHVILPKQKGSSDS
CLTENEEELFEIQDRYDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPK
HDETGFFKLTECGMEEISMCVQKGFHPHSKEPPLFQVCDHVQFKAELWATIIDLR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggatggaagcagctccccggaggagcgcgtccgagtgctgagccagaagggctcccag
gtggaggtgcgggacagcatccccccccaacgctacttccgatcggggaaggagatgctg
cgcatggccacggtctaccacgaagaaggcaacctcgaggaggccttcatgctctacacc
aagtacatcacgttgtttgttgaaaagctacccaagcaccaggactacaaaatcgtttcg
ctgcccttgaaggcggacacaacgaagaaactcaagacggtttttccgctcgcagagaat
gtgaagaagaagctcaaagccacttacgctaaagaacacaacatgtacttggagaagcag
ggcgagctggcggcggagcgagcgcgcgagcaggagcgagcgcgcgaggtggaggaggag
cggcgtcgcctcgcgcagatgcagcggcagcagcaggagcagcaggccttccacgccttc
gaggagacgctgcggcagcgcgagcgcgagaaggagcgcctcgccgtgctgcaccggttc
ggctccgaggaccacgacgacgccgtccccggtgccgccgccgccgccgccgccgggccg
ggggtgctgattcagggcctgaagcccccccccacggacgggcggcccccacccgccgcc
cccggcgggccccccgccgtggacaggtcctgcaagccggcgtcgctcgtgtcaccagcg
cgtgacaatgagagaaaagtggtcgtcccttcaaatctctgcgaaaagtttctggcacaa
gtatcggagaacactgctcgtgctgtggaaacctgcggcatcctgtgcgggagaatggtg
caaggcgtgttcacggtgacgcacgtgatcctgccgaagcagaagggctcctccgactcg
tgcctgacggagaacgaggaggagctctttgagatccaggatcgatacgacctgctcacg
ctcggctggatccacactcacccgacacagacggcgttcctctccagcgtggacctgcac
acgcactgctcctaccagctcatgctgcccgaagccatcgcaatcgtctgttctcccaag
cacgatgaaacggggttcttcaagctgacggagtgtggcatggaggagatctcgatgtgc
gtccaaaagggcttccacccgcactccaaggagcctccgctgttccaggtgtgcgaccat
gtgcagttcaaggcggagctgtgggccaccatcatcgacctccggtga
DBGET
integrated database retrieval system