Petromyzon marinus (sea lamprey): 116940263
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Entry
116940263 CDS
T09614
Name
(RefSeq) PDZ and LIM domain protein 1-like isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116940263
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
116940263
Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
116940263
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116940263
NCBI-ProteinID:
XP_032805677
UniProt:
A0AAJ7SU50
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All DBs
Position
8:complement(9601867..9646687)
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AA seq
469 aa
AA seq
DB search
MPQQVILTGPAPWGFRLVGGRDLDQPLTISRVTPGSVASSANLSPGDVILAIEGENAEEM
THAEAQERIKACSTATLTLKIDRPQTTLWRPNVLEEGKVHPYKVNLASEPQEVKPIGVGH
NRKPAPFAPAGSAPKVIGPQYNNPAGLYSSDNLHHALQTQCAVAPPASRSPRISLSRQDE
DYFEHKFNARPKPYVPPSGRTVTPPPSVDSGHVTPVPSSERSTPSLPPVEFIQPYVSHAV
PSVSSGRNTPSVTSLLSVNPQDLKDMARAAPNKPIEVEVPGMKVFHAQFNSPMQLYSQDN
IMDSLQGQVSSALACDSQQSEPHIPAVKGGLLADSEVYKLRQENQEGGYGPKQSGSFQRL
QEMLEEAPGGSERTVGIRSVKAPVTKVGADVGGVQKLPICSKCGNGIVGPVVRARDKPHH
PECFTCGDCGMNLKQKGFYFVDGQIYCDAHAKVRLQPPAGYELKAVSPK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgccacagcaagtcatcttgacgggtccagcgccgtgggggttccgtctcgtgggagga
agggaccttgaccagcctctcaccatcagccgggtgacgcccggcagtgtcgcgtcctcg
gctaacctgtctcccggcgacgtgatcctggccatcgagggggagaacgcggaggagatg
acccacgccgaggcccaggagcgcatcaaggcgtgcagcactgccacgctcacgctcaag
attgaccgacctcaaacaactttgtggaggccgaatgtgctggaggaaggcaaggtacac
ccctacaaggttaatttggcttccgaaccacaggaagtcaagccaattggcgtcggccac
aaccgcaagccggcaccctttgcccccgcgggcagtgccccaaaggtgattgggccccaa
tacaacaacccagcggggctctactcgtccgataacctgcaccacgctctgcagacgcag
tgtgccgtcgcaccaccggccagcagatcccctcgtatctctctctctcgccaggatgaa
gactactttgagcacaaattcaatgccaggcccaagccctacgttcctcccagcggcaga
actgttacccctccgccctccgtagacagcgggcacgtcacgccggtgccctcaagtgaa
cgtagcaccccttcgctccccccggtcgagtttatccagccctacgttagccacgccgtg
ccctctgtatccagtggtcgcaacaccccgtccgtgaccagcctgcttagcgtgaatcct
caagatctgaaggacatggctagggccgcaccaaacaaacccattgaggtggaggtgcct
ggcatgaaggtcttccacgcacagtttaactcgccaatgcagctttactctcaagataac
atcatggacagcttgcagggtcaggtctcttcggccttagcatgcgacagtcaacagagc
gagccacacatcccagccgtcaagggtggactcctcgccgactcggaggtgtacaagctg
aggcaagagaaccaagagggcggctacgggccgaaacagtcgggctccttccagaggctg
caggagatgctggaggaagccccaggtggctctgaacgcactgtgggcatacggagtgtg
aaggcacctgttacgaaagtgggagcagatgtgggtggagtgcagaagctgccgatttgt
tccaagtgtggcaatggaattgtaggccccgtggtgagagcccgggataaaccccaccac
cccgagtgcttcacgtgcggtgactgtggaatgaacctcaagcagaagggcttctacttt
gtggatgggcagatctactgcgacgctcacgccaaggtgcgcctgcaaccgccagccggc
tacgagctgaaagcggtgtcccccaagtaa
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