Petromyzon marinus (sea lamprey): 116940296
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Entry
116940296 CDS
T09614
Symbol
GBF1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116940296 (GBF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116940296 (GBF1)
Membrane trafficking [BR:
pmrn04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
116940296 (GBF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
AP-5_subunit_s1
Mon2_C
DUF758
Motif
Other DBs
NCBI-GeneID:
116940296
NCBI-ProteinID:
XP_032805808
UniProt:
A0AAJ7SUG0
LinkDB
All DBs
Position
8:11411639..11584167
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AA seq
2046 aa
AA seq
DB search
MVDKSIYIVQGEITTVVNAIKRSSRWNTHNPLDDEQDPLLGSFCQLKEVLNSITKLSEVE
ANVFLGPFLEVIRSEDTTGPITGLSLSSVNKFLSYGLIDPAHDGAAAAAENMADAITHAR
FVGTDPASDEVVLMKILQVLRMLLLTPVGSHLTNESVCEIMQSCFRICFESRLSELLRKS
AEHTLVDMVQLLFARLPEFKEESKSFIVTNMKKAYTVLWKNKRVQLKMRAGGMVDQKWKK
QKRSPRASRHAATAGSTGKGSGGGGGAGGSASSNSSTGSGSSRLPSGQPCVDSRAREQAQ
GSLSDAGMPSPSEQPACDSASELTADHTSSQESVGAGLPRCPSDPSLAYSEQASSPDTPL
SGEDPASLAMDSGRGGSEEASRDDPPPSPRRGLGDVLVSDRCLLNSAAAADDRRLGNHAG
AREIGEEEGRGQQHEQQQEADMLEQDRTSADVVSEQCPDDAADTSGGGKGHFLSRETIPE
DSEGQESPCEPPLHEGRDLDYVNPRGVRFTNFSQSAPSKENHTGGTTVLLPYGLPCVREL
FRFLVSLTNLYDRHNSDVMVHMGLQLLTVAMETAHESVAHYASLLALVQDDLCRHLIQLL
GMERLGLFAASLRVCLLLFESMREHLKFQLEMYLKKLMDVITSESPRLPYEMKEMALEAV
VQLWRIPGLVTELYINYDCDFYCSNLFEELTKLLSKNAFPITGQLYTTHLLSLEALLTVI
NSIEAHCQPRATSSSAAKAGELSEPSTTDAAGKPCGDLETFVANAERKEVTGTPQPPTSG
HLMASRMKSAAHTPTDASKPEKKPPKKPARFSSCLPTPQELAQIKTKKKLLMKGTEKFNV
KPKTGIEFLQENKLLATPMDCTEVARWLRDNPRLDKKMIGEFVSDRKHKELLSAFVKTFT
FETLRIDESLRLYLEAFRLSGEAPVIHRLLEAFTDQWHVMNGSPFVNNDACFALAYAVIM
LNTDQHNHNVRKQNVPMTLEEFKKNLKGVNGSKDFEQDMLEEIYNAIRNDEIVMPEEHTG
LVRDNYMWNLLLHRGVSQEGLFLHVPGGAYHLDLFTMSWGPTIAALSFVFDKSTDETIIQ
KAISGFRKCAMISAYYGLSDVFDNLIISLCKFTMLSNESVDNLPVMFGSNPKAQLSAKTV
FNLAHRHGDILREGWKNIMDSMLQIFRAKLLPKSMVEVEDFVDPNGRISILREESPSQRS
DSTMFSFVNWLTLSGPEQSGQRGPSAEDQEFKKIAMKCIEECHPEQLLTESRFLRLESLQ
ELMKALSSMSMEDEGYDEEAAVFYLEMLLQIILQNKDRVGCLWQTVRDHLYQLIVHASEH
CFLLERAVVGLLRLAIRLLRREENSTQVLHSLRVLLLMKPAVLAKASRQIAFGLHELLKT
NAANIHSQEDWSTLFTLLECIGAGAKPPSSLQYMAGVEVADSGAQSDSELPSHQPNGVTS
DRGYTSDTEVYTEHNKPARMHRSTTDLDISGSGWLLVGKDDVEGGGGGAGGGGGGGRPSP
LVNQYSLSLGQELGAHDTKSLTKCVESLSFIVRDAAHVTPDNFPLCVRAIRIFVEASLNG
GIKGSDKKTKTHKYEKPSRLKKKGKDRDGGGGRRGNGGGGRSVHKGAAHSDDDDDEDESV
PASYHTVSLQVSHHLLDLMHTLHTRAASIYSSWAEEQVRQEAATPTADAAETAAQRTGGR
LAKHAVVQADASTLWASCWCPLLQGTARLCCDARRQVRTQALTYLQRALLMHDLQTLSAL
EWEACFNKVLFPLLTKLLENISPADQTGMEETRMRTSTLLSKVFLQHLSPLLSLPTFAAL
WLTILDFMDKYMHADNSDLLMEAIPESLKNMLLVMDTAGIFQNAEARTGFSQLWEITWER
IDCFLPQLRDELFRQPVIPESAARAPSPPVVLEVVSSQPVTSTGGHSTPEPSNTVAAAAA
AASATAPVAPATEPERPSAATGSTTATPVPSPASSPARVGGSGGRAGGSPAGEVSHALSQ
SPFILQPPLPALGPTLQEALPPMALPIILNPALIEATSPVPLLAAPRGVSVAETAAMPKA
LTGEAE
NT seq
6141 nt
NT seq
+upstream
nt +downstream
nt
atggttgataagagcatctacattgttcaaggggagattacgactgtcgtgaatgccata
aagagaagttcacgatggaacacacacaaccccttggatgatgagcaggacccactgctt
gggagcttctgccagctcaaggaagttctcaactccatcacaaagctctcggaggttgaa
gccaatgtattcctgggaccgtttctggaggtgattcgctcagaggatacaacgggcccc
atcaccggcctttccctctcctccgtcaacaagtttctgtcgtatggactcatagaccca
gcgcacgatggcgcggcggcggcggcagagaacatggcagatgccatcacgcacgcgcgc
ttcgtcggtaccgacccagccagcgatgaagtggtgctcatgaagattctgcaggtgctg
cgcatgctgctgctcacgccagtggggtcgcacctgaccaacgagtcggtgtgtgagatc
atgcagtcctgcttccgcatctgcttcgagtcgcgcctcagcgagctgctgaggaaatcc
gctgaacacacgctggtggatatggtgcagctcctcttcgcaaggttaccagagtttaag
gaggaaagcaagagcttcattgtcacgaacatgaaaaaggcttacactgtgttgtggaaa
aataaacgtgttcagctcaagatgcgagcgggaggcatggtcgaccagaagtggaagaag
cagaaacggtctcctcgcgcgtcgcgccatgcagccacggccggctccacggggaagggg
agcggagggggaggaggcgccggtggcagcgccagcagcaacagcagcaccggcagtggc
agcagtcggctgccatccgggcaaccctgcgttgattccagggctcgggagcaagcgcag
ggctcgctaagcgatgctggaatgccgtctccgagcgaacagccggcctgtgactcggcg
agcgagctcaccgcagaccacacgtcgtctcaagagtccgtgggggccgggttaccccgc
tgcccgtctgacccgtcgctggcgtacagcgagcaggcgtcctcgccggacaccccgctg
tccggcgaggaccccgcgagcttggcgatggacagcgggaggggcggcagcgaggaggcg
tcgcgagatgacccgccgccgtcgccgcgccgcggcctcggtgacgtgctggtcagcgac
aggtgcctgctcaactccgccgccgcggccgatgaccgccgccttgggaaccacgcgggg
gcacgtgagatcggcgaggaggagggacgggggcagcagcacgagcagcagcaagaggcc
gacatgctcgagcaagacagaacctcggcagacgtggtgtccgagcaatgccccgacgac
gcagccgacacctcgggaggggggaagggtcacttcttgtctcgggagacgattcccgag
gactcggagggccaggagtcaccgtgcgagccgcccctgcacgagggtcgcgacctcgac
tacgtgaacccacgcggggttcgcttcaccaacttctcacagagcgcccccagcaaggag
aaccacaccggcggcacgacggtgctgctgccctacggcctgccctgcgtccgcgagctc
ttccgcttcctggtgtcgctcaccaacctctacgaccgccacaactcggacgtcatggtg
cacatggggctgcagctgctcaccgtggccatggagacggcgcacgagagcgtggcgcac
tacgcctcgctgctggcgctggtgcaggacgacctgtgccgccacctcatccagcttctg
ggcatggagaggctggggctgtttgcagcctccctccgagtctgcctgctcctctttgag
agcatgagagagcatctcaagttccagttggagatgtacctgaagaagctgatggacgtg
atcacgtcggagagcccgcgcctgccgtacgagatgaaggagatggctctggaggctgtg
gtgcagctctggcgcatcccgggcctcgtcacagagctctacatcaactacgactgcgac
ttttactgctccaacctctttgaggagctcaccaagctcctgtccaagaatgcgttcccg
atcacggggcagctgtacacgacgcacctgctgtcgctggaggcgctgctgacggtcata
aacagcatcgaggcgcactgccagccccgtgccaccagcagcagcgcagccaaggctggg
gaactatcagagcccagcaccacagacgccgctgggaagccgtgcggagacttggagacg
ttcgtggcgaatgccgagagaaaggaggtcaccggcacgccgcaacctccaaccagcggg
cacctcatggcctccaggatgaagtccgccgctcacactcccacggacgctagcaaacct
gaaaagaaacctccgaagaagccagcgagattttcttcctgcctgcccactcctcaggaa
cttgctcaaataaagacgaagaagaagctgctgatgaaaggcacggagaaattcaacgtg
aagccaaagacgggcatcgagttcctgcaggagaacaagctgctcgcgacgcccatggac
tgcacggaggtggcccgctggctgcgcgacaacccgcgcctcgacaagaagatgatcggc
gagttcgtcagcgacaggaagcacaaggagctgctcagcgccttcgtcaagacgttcacg
tttgagacgctgcgtattgacgagagtcttcgcctctacctggaggcgttccgtctgtcc
ggggaggcccccgttattcaccgtctgctggaggccttcactgaccagtggcatgtgatg
aatgggagcccgttcgtgaacaatgacgcgtgttttgccctggcctacgcggttatcatg
ctcaacactgaccagcacaaccacaacgtccgcaaacagaacgtgcccatgactctggag
gaatttaagaagaacctaaaaggagtgaatgggtcaaaagactttgagcaagacatgctg
gaagaaatatacaatgccatcaggaacgacgagatcgtgatgccggaggagcacacgggc
ctcgtgcgcgacaactacatgtggaacctcctgctgcaccgcggcgtgtctcaggagggc
ctgttcctgcacgtgcccggcggcgcctaccacctggacctcttcaccatgagctggggc
cccaccatcgccgccctgtccttcgtgttcgacaaaagcaccgacgagaccatcatccaa
aaggccatctctggtttcaggaagtgtgcgatgatttctgcctactacggcttgagtgac
gtctttgataatctcatcatctccctttgcaagttcaccatgctcagcaatgagtctgtg
gataacttgccggtgatgtttggaagtaacccgaaggctcagctgtctgccaagacggtg
tttaacctggcacaccggcacggagacatcctgagggagggctggaaaaacatcatggac
tcgatgctgcagatcttccgagccaagctgctgcccaaatccatggtggaggtggaggac
tttgtggaccccaacggcaggatctccatcctccgcgaagagagtccatcccagcgttct
gactcgaccatgttcagctttgtgaactggctgacgctcagcgggcccgagcagtccggc
cagaggggaccttcggctgaggaccaggagttcaagaagatcgccatgaagtgcatagag
gaatgtcacccggagcagctgctgacagagtctcggttcctgcggctggaatctctgcag
gagttgatgaaggcgctgtcgtccatgtcgatggaggatgaggggtacgacgaggaggcg
gccgtcttctacctggagatgctgctgcagatcatcctgcagaacaaggaccgcgtgggt
tgcctgtggcagacggtgcgcgaccacctgtaccagctgatcgtgcacgcgagcgagcac
tgtttcctgctggagcgcgccgtcgtggggctgctgcgcctcgctatccgcctcctgcgc
cgcgaagaaaacagcacgcaggtcctgcactccctgcgcgtgctgctgcttatgaagccg
gccgtgctggccaaagcgagccggcagatcgccttcggcctgcacgagctgctcaagacc
aacgcggccaacatccactcgcaggaggactggagcaccctgttcacactgctcgagtgc
atcggcgccggcgccaagcccccgtcctccctgcagtacatggccggcgtcgaagtggcc
gactcgggcgcgcagtcggacagcgaactgccatcacaccagcccaacggcgtcacgtcc
gaccgcggctacacgtctgacacggaggtgtacacggagcacaacaagccggcgcggatg
caccgctccaccacggacctcgacatcagtggcagcggctggctgctggtcggtaaggat
gacgtagagggcggtggcggcggggccggcggtggtggcggtggcggcaggccctcgccc
ctggtgaatcagtacagcctgagcctaggccaggagctgggcgcgcacgacaccaagtcg
ctcaccaagtgcgtcgagtcgctgtcgttcattgtgcgcgacgccgcacacgtgacgccg
gacaacttcccgctgtgcgtgagggccatccgcatcttcgtggaggccagcctcaacgga
ggaatcaagggcagcgacaagaaaaccaagacgcacaagtacgaaaagccgtcgcggctc
aagaagaagggcaaggacagagacggcggaggaggcaggagagggaacgggggcggcggg
cggtcggtacacaagggggcggcacacagcgatgacgacgacgacgaggacgagagcgtg
ccggccagctaccacaccgtgtctttacaggtcagtcaccatctgctggacctgatgcac
acgctgcacacccgagcggccagcatctacagctcgtgggccgaggagcaggtccgccag
gaggcagccacgccgacggcggacgcggccgaaacggcagcgcagagaacgggtggcagg
cttgcaaaacacgccgtggtgcaggccgacgccagtaccctgtgggccagctgctggtgc
cccttactgcagggcacggcgcgcctgtgctgcgacgcacggcgccaggtgcgcactcag
gcgctcacctacctgcagcgggcgctgctgatgcatgacctgcagacgctgtccgccctc
gagtgggaggcctgcttcaataaggtgctgttccctctgctgaccaagctgcttgagaac
atcagcccggctgaccagacgggcatggaggaaacgcgcatgaggacctcaacactgctg
agcaaggtgttcttgcagcacctgtctccactgctgtcactgccaacctttgccgcactg
tggctcaccatccttgacttcatggacaagtacatgcacgccgacaacagcgacctgttg
atggaggcgatcccggagtcgctgaagaacatgctgcttgtaatggacacagcaggcatc
tttcagaacgcggaggcacgcactggcttctcccagctctgggagattacgtgggagcgg
atcgactgcttcttgcctcagctgcgggatgagctcttccggcagccggtcatccccgag
tccgcggcacgagccccgtccccgcccgtcgtgctggaggtggtgagcagtcagcccgtc
acctccaccggcggccactccactccagagccgagcaacaccgtggctgctgctgctgct
gctgcctctgctacggcacccgtggctcctgcgacggagccagagaggccctcggcagcc
accggcagcacaacggcgacgcccgtgccgtcgccggcttccagccctgcacgggtgggt
ggcagcggtggcagagccgggggaagccccgcgggcgaggtgtcgcacgcgctgtcgcag
tcgcccttcatcctgcagccaccgctaccggcgctcggccctactctccaggaggcgttg
ccgcccatggcgctgccgattatcctcaaccccgcgctcatcgaggccacgtcgcccgtg
ccgctcctcgcggcaccgcgcggcgtgtccgtggctgagaccgctgccatgcccaaagcc
ctgaccggggaggccgagtga
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