Petromyzon marinus (sea lamprey): 116940304
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Entry
116940304 CDS
T09614
Symbol
PCNA
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03030
DNA replication
pmrn03410
Base excision repair
pmrn03420
Nucleotide excision repair
pmrn03430
Mismatch repair
pmrn04110
Cell cycle
pmrn04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116940304 (PCNA)
03410 Base excision repair
116940304 (PCNA)
03420 Nucleotide excision repair
116940304 (PCNA)
03430 Mismatch repair
116940304 (PCNA)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116940304 (PCNA)
09144 Cellular community - eukaryotes
04530 Tight junction
116940304 (PCNA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmrn03032
]
116940304 (PCNA)
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116940304 (PCNA)
DNA replication proteins [BR:
pmrn03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
116940304 (PCNA)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
116940304 (PCNA)
MMR (mismatch excision repair)
Other MMR factors
116940304 (PCNA)
TLS (translesion DNA synthesis) factors
Other TLS factors
116940304 (PCNA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
Motif
Other DBs
NCBI-GeneID:
116940304
NCBI-ProteinID:
XP_032805831
UniProt:
S4RTM7
LinkDB
All DBs
Position
8:complement(11755574..11759893)
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AA seq
261 aa
AA seq
DB search
MFEARILQGNILKKVLEALKDLITEACWDISSTGVSLQSMDSSHVSLVQLTMRSDGFDTY
RCDRNLAMGINLTSMSKILKCAGNDDMITLRAEDNADILTLVFEAQNHEKVSDYEMKLMD
LDVEQLGIPEQDYSAVVKMPSGEFSRICRDLSQIGDSVVICCTKDGVKFSASGELGTGNI
KLSQTSGADKEEEAVTIEMSEAVQLTFALRYLNFFTKATPLSPTVTLRMSADVPLVVEYG
IADMGHIKYYLAPKIEDEEAA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggcacgcatcctgcagggaaacatcctgaagaaggttctcgaggcgctcaag
gatctcataacggaggcgtgttgggacatcagttcgaccggcgtgagcctgcagtccatg
gactcgtcgcacgtgtccctggtgcagctcaccatgcgcagcgacggcttcgacacctac
agatgcgaccgcaacctcgccatgggcatcaacctcaccagcatgtccaaaatcctcaag
tgtgccggcaacgacgacatgatcaccctgagggccgaggacaatgcagacatactcacc
ctggtgttcgaggcccaaaatcatgagaaggtgtctgattatgagatgaagttgatggac
ctggatgtagagcaactgggaattcccgaacaggattacagcgccgttgtgaagatgcca
tctggggaattttctcggatatgccgagatctgagccagattggtgactccgttgtcatc
tgctgcaccaaagacggtgtaaagttttcagccagtggcgagttgggcactggcaacatc
aaactttcacagaccagcggtgctgacaaggaagaggaggctgtaacgatagaaatgagt
gaagccgtgcagctgacattcgcccttcgctacctgaacttcttcaccaaggccacccca
ctgtcacccaccgttacactccggatgtctgccgatgtcccgcttgttgtggaatatggc
atcgcagacatgggccacatcaagtactatctggcacccaagattgaggatgaagaggct
gcataa
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