Petromyzon marinus (sea lamprey): 116940479
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Entry
116940479 CDS
T09614
Symbol
ATRN
Name
(RefSeq) attractin isoform X1
KO
K24332
attractin
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pmrn04091
]
116940479 (ATRN)
Lectins [BR:
pmrn04091
]
C-Type lectins
Others
116940479 (ATRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_5
Kelch_3
Kelch_4
EGF_LMN_ATRN
Kelch_6
Kelch_2
CUB
NANM
PSI
EGF_Teneurin
EGF_laminin
PSI_integrin
TMEM100
DUF4842
Motif
Other DBs
NCBI-GeneID:
116940479
NCBI-ProteinID:
XP_032806250
UniProt:
A0AAJ7SWV7
LinkDB
All DBs
Position
9:complement(3807051..4144538)
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AA seq
1496 aa
AA seq
DB search
MAAPAAGVSAAALVTPRAWRRGPAAAAASRAFGSAGGEGRDAGSLRSPPGRGGGDGGGGR
DGRGPPSAARPGEAPPAVVGGRVGGARRAGPLVVAGGLPLLGGGRSRGGAGARRSPAGCG
HVLCRYAAAYTALCALLCCWAGAEAGPAECDRWTCVNGRCADSSSSSSSSSSSSSTSSSP
TGEQQQQPQCVCDQGWMGELCQHCGGRFKLTEPVGVITDGPSNYKYKTKCSWLIQGAKNV
ELRLRFNHFATECSWDHMYVFDGDSIYAPLLAVFSGLIVPENRANESIPEVVARSGSAFL
HFFSDAAYNLTGFNISYSFNSCPNNCSGHGRCNSSGGAHCVCDEFWKGGACDVPYCGDNC
GSPVRGFCDLPGKKCCMCNSSWQGPDCSVTVPANESYWMLLDDEYSGIARASHKAVVHNG
SMWIVGGYAFNYSGFPMVLSYDLKTNTWPALKRIEIPFYPRYGHSLSLHGDNLYMYGGKI
ETPGGSVTDELWVFHVPNQTWSHQVPLPGTPRGQFAAVGHSAHVATLDTGEVVMFVFFGH
NPTYGYLSKVQEYNIKTNSWRIPDTNGALVLGGYGQSSVYDSLGRAVFVHGGFKAFSMNR
NSLTDDLYRFDVNTRTWTILTSSGLCRYLHSAVIISGTMLVYGGNTHNDTSVSTGTKCFS
SDFMAYDIACDEWSVLPKPDLHTDTDRFGHTAVAHNGSMYIFGGFDSLLLQDLLVYTPLS
CEVFSERERCEGARPGLRCVWNSTRCLPVGSEYGIGTHNVTCPQKRAATEKVCSMFKDCG
SCTSNLASCQWCSGSCTPLESNCTVEPVINFSQCQVRAEDTCAKLPSCLGCVNDSICQWE
SKNQHCMAVPDHMCGDGWDRVAESCYKINTSVVNYDNARMDCISHNGIPASLTTAKEVEH
VLAKLALMTNELMPWVGLRGLNVSHWRWEDGAAFTNSTLVWEANEPSGSGFCAVLSPPSQ
AGRLKAYTCTELTRGSVCEKPVVNPNQNARQCRMPCAARRTCAECASGSTDCMWCSNAKR
CVDANAYVPSFPYGQCMEWHTMNACPPENCSGYRTCAGCMEQPGCGWCNDPSDTGKGQCM
EGSATAPVTVNGTRATLNTSMCREDRSFTWNFITCPDCQCNGHSTCVNATVCEHCSDLTM
GKHCETCSPGYYGDPTNGGSCQGCKCNHHATDCNAQTGKCYCTTKGIKGDQCQLCDIDNR
YLGNPLKGTCYYSLLIDYQFTFSLSLEDDKHYTSINFMATPEESNRDLDMFINTSKNVNL
NITWSSGSTAGTMMGEEVLIVSKAQIREYKSSFSNEKFDFRGNPNITFYVYVSNFTWPVK
IQIAFSQHSNFMDLVQFFITFFSCFLSLLLVAAVVWKIKQSCWATRRREQLMREMQQMAS
RPFASVDVALESEEEPPDLIGGSIKRSPRNLSNVPMQTIPQPIAMEPCAGNRAAIYSVLV
RLPRGLNACPPPGQSGLALASALVDISHYKPSESKEKAAAVRNRKHHPPAQPGTCV
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccggctgcgggagtctccgcggctgctctcgtgacaccgcgggcctggcgc
agggggccggcggcggcggcggcgtcccgcgccttcggatctgcgggaggcgaaggtcgt
gacgccgggtctctccgaagcccaccgggaagaggaggcggtgatggaggaggcggtcgt
gatggtcgtggccccccaagtgcagctcggccgggagaagctccaccggcggttgtaggt
ggacgtgttggcggtgcgcgtcgagcaggtcctctcgtcgtcgccggaggtctaccgcta
ctcggcggtggacgaagccgcggcggtgccggcgcaaggagaagccctgcgggttgcggc
cacgtcctgtgccgctacgccgcagcctacaccgcgctgtgcgccctcctctgctgctgg
gcgggagccgaggccggcccggccgagtgcgatcgctggacgtgtgtcaacgggcgatgc
gccgactcctcctcgtcgtcgtcctcctcgtcctcctcctcctcgacctcctcatcgccc
acgggagagcagcagcagcagccccagtgcgtgtgcgaccagggctggatgggcgagctg
tgccaacactgcggaggccgcttcaagttaacggagcctgttggggtcatcactgatggt
cccagcaactacaaatataaaaccaagtgctcgtggctcatccagggagctaagaatgtg
gagctacggctgcgattcaaccacttcgccaccgagtgcagctgggaccacatgtacgtg
ttcgacggggactccatttacgctccgctgctggctgtcttcagcggactcatcgtgccg
gagaaccgggccaacgagagcatccccgaggtggtggcgcgctccggaagcgccttcctt
catttcttcagcgacgcggcctacaacctcacgggattcaacatctcgtacagctttaac
tcgtgcccaaacaactgctcggggcatgggcggtgcaacagctcgggcggtgcgcactgc
gtgtgtgacgagttctggaagggcggagcgtgcgacgtcccctactgcggcgacaactgc
ggcagccccgtgcgcggattctgcgacctgccgggcaagaagtgctgcatgtgcaacagc
agctggcagggacccgactgttcggtgacggtgcccgccaacgagtcgtactggatgctc
ctggacgatgagtactcgggtatcgcgcgagcatcgcacaaggccgttgtgcacaatggc
agcatgtggatcgtgggtggctacgcgttcaactactcgggcttccccatggtgctcagt
tatgatttgaagacgaacacgtggccagcactgaagcgcatcgagatcccattttatcca
cgctacggccattccctctctctgcacggggacaacttgtacatgtacggcggcaagatc
gagacgccgggcggcagcgtgacggacgagttgtgggtgttccacgtgccgaaccagacg
tggtcgcaccaggtgcccttgcccggcaccccgcgcggccagtttgccgccgtgggccac
tcggcgcacgtggccacgctggacaccggcgaggtcgtcatgttcgtgttctttgggcac
aatcccacctacgggtacctgagcaaggtccaggagtacaacatcaaaacgaactcgtgg
cgcatccctgacaccaacggggcgctggtactggggggctacggccagagcagcgtgtac
gactccctcggccgggccgtgtttgtgcacggcggcttcaaggccttcagcatgaaccgc
aacagcctgacggacgacctgtaccgcttcgacgtcaacacgcgcacctggaccatcctc
acgagcagcggcctctgccgctacctgcactcggcggtgatcatcagcggcaccatgttg
gtgtacggcggcaacacgcacaacgacacgtccgtcagcactggcaccaagtgcttctcc
tccgacttcatggcctacgacatcgcttgtgacgagtggtcggtgctccccaagcctgac
ttgcacacggatacggaccgctttggccacaccgctgtggctcacaacggctccatgtac
atattcggcggcttcgacagcctgctgctgcaggacctgctggtgtacacgccgctcagc
tgcgaggtgttctcggagcgcgagcgctgcgagggcgcgcggcccggcctgcgctgcgtg
tggaacagcacgcgctgcctgcctgtaggctccgagtacggcatcggcacccacaacgtc
acctgtccccagaaacgagccgccactgaaaaggtgtgcagcatgttcaaggattgcgga
agctgcacctccaacttggccagctgccagtggtgcagtggttcctgcacgcccttagag
tccaactgcacagtggagccggtgatcaacttcagccagtgccaggtccgagctgaggac
acctgtgccaaactccccagctgcctgggctgtgtcaacgactccatctgtcagtgggag
agcaagaaccagcattgcatggctgtgccagaccacatgtgcggggacggctgggaccgc
gtggctgagtcctgctacaagatcaacacgagcgtggtgaactatgacaacgcgcgcatg
gactgcattagtcacaacggcatccccgcctcgctcaccaccgccaaggaagtggagcac
gtgctggccaagctggccctcatgaccaacgagctgatgccatgggtcggcttgcgtggc
ctcaacgtgtcgcactggcgctgggaggacggcgccgccttcaccaactccacgctggtg
tgggaggctaacgagccgagtggctcggggttctgcgccgtgctgtcgccccccagccag
gcgggccgcctcaaggcctacacgtgcacggagttgacccgcggcagcgtttgcgagaag
cccgtcgtgaacccgaaccagaacgcgcgtcagtgccgcatgccgtgcgcggcgcggcgt
acctgcgccgagtgcgccagcggcagcaccgactgcatgtggtgcagcaacgccaagcgc
tgcgtggacgccaacgcctacgtgccctccttcccctacggccagtgcatggagtggcac
acgatgaacgcctgcccaccggagaactgctccggctaccgcacgtgcgccggttgcatg
gagcagccaggctgcggctggtgcaacgatcccagcgacacgggcaagggccagtgcatg
gagggctcggcaacggcacccgtcaccgtcaacggcacgcgggccacgctcaacaccagc
atgtgtcgggaggaccgttcattcacatggaatttcatcacctgcccagactgccagtgc
aacggacacagcacgtgcgtcaacgcgacggtgtgtgagcattgcagcgacctcacgatg
ggcaagcactgtgagacctgctcgcccggatactacggggaccccaccaacggcggctcc
tgccaagggtgcaaatgcaaccaccatgccacggactgcaacgcgcaaacgggcaaatgc
tactgcaccaccaaaggcataaagggagaccaatgccagctgtgtgacatagacaatcgg
tatctgggaaatcctctgaagggcacctgctactacagcctgctgattgactatcagttc
acattcagcctatcgctggaggacgacaaacattacacctccatcaacttcatggccacg
ccggaggagtcaaaccgagacctcgacatgttcatcaacacatccaagaacgtgaacctc
aatatcacttggtcttccggctccacagcgggcacaatgatgggcgaagaggtgctcatc
gtttcgaaggctcagatccgtgaatacaaaagctccttttcaaacgagaagtttgacttt
cgaggaaaccccaacatcaccttctacgtctacgtcagcaacttcacgtggcccgtcaag
atacagattgccttttcgcagcacagcaactttatggacctggtgcagtttttcatcaca
tttttcagttgtttcctttctctcctgttggtggcggccgtcgtttggaaaatcaagcag
agctgctgggccacgaggcgtagagagcaactaatgcgggagatgcagcagatggcgagc
cggccatttgccagcgtggacgtggctcttgagagcgaggaggagccacccgacctcatc
ggaggcagcatcaagcgctcgccgaggaatttgtcaaacgtcccaatgcagaccataccg
cagccaattgcgatggagccatgcgcagggaaccgtgcggccatatactcagtgctggtg
agactgccccggggtttgaacgcctgcccaccgcccggacagtcaggtcttgccttggcg
agcgcgctggtggatatctcacactacaagcccagtgaatccaaggagaaggcagcagct
gttcggaaccgcaagcaccacccgcccgcccaacccggaacttgtgtatga
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