Petromyzon marinus (sea lamprey): 116940533
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Entry
116940533 CDS
T09614
Symbol
ETF1
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116940533 (ETF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116940533 (ETF1)
03012 Translation factors [BR:
pmrn03012
]
116940533 (ETF1)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
116940533 (ETF1)
Translation factors [BR:
pmrn03012
]
Eukaryotic type
Release factors
116940533 (ETF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
116940533
NCBI-ProteinID:
XP_032806370
UniProt:
S4RP18
LinkDB
All DBs
Position
9:6139148..6154087
Genome browser
AA seq
439 aa
AA seq
DB search
MADDPTAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVSKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVMDGNGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISNDKPNVVGLILAGSADFKTELSQSD
MFDPRLQSKVLKIVDISYGGENGFNQAIELSQEVLTSVKFIQEKKLIGKYFEEISQDTGK
YCFGVDDTLRALEMGAVEILIVWENLEITRYVLRCNPAEAEDPEKVLYLTPEQEKDKSHF
IDKETGVEHEMVENMPLLEWFANNYKKFGATLEIITDKSQEGSQFVRGFGGIGGILRYRV
DFQGMDFQGDDEEFNLDDY
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacccgacggcggccgacaggaacgtggagatctggaagatcaagaagctc
atcaagagcctcgaggcagcgcgcgggaatggcaccagcatgatctcactgatcatcccg
cccaaggaccagatctcgcgcgtgtccaagatgcttgcagacgaatttggcacagcctcc
aacatcaagtcgcgcgtcaacaggctgtccgtgctcggagccatcacgtctgtacagcag
aggctcaagctctacaacaaagtccctcccaatggattggtggtttactgtggcacgatc
gtcacagaggagggtaaagagaagaaagtcaacatcgatttcgagcctttcaagcccatc
aacacttcgctttacttgtgcgataacaagttccacacagaggctctgacggcgctgctt
tcagacgacagcaagtttggcttcatcgtgatggatggaaatggcgcgctctttggcacg
ctgcagggcaacactcgagaggtcttgcacaagtttactgtggacctccccaaaaagcac
ggacgtggaggtcagtcagcgctgcgttttgcgcggcttcgcatggagaagcggcacaac
tacgtgcgaaaggtggcagagacagccgtgcagctcttcatctccaacgacaagcccaac
gtagtgggcctcatcctggcagggtcagctgatttcaagacggagctcagccagtccgat
atgtttgacccgaggttgcagtcaaaggtgctgaaaattgtggacatatcgtatggaggg
gaaaatggcttcaaccaggccatagagctgtctcaggaggtgctcacaagtgtcaaattc
atccaagagaagaagctcattggcaagtacttcgaggagatcagccaggacacgggaaag
tactgctttggggtggatgacacgctgagggcactggagatgggcgcggtggagatcctc
atcgtatgggagaatctggagattacgcgatacgtcctgaggtgcaacccagctgaagct
gaagacccggagaaggttttgtatttaacgccagagcaagaaaaggacaagtcacacttc
attgacaaagagacgggggtggagcatgagatggttgagaatatgccactgctggagtgg
tttgccaacaactacaagaagtttggagccacgctggaaatcatcacggacaagtcccag
gaaggctcccagtttgtcaggggctttggaggcattggaggcatcctgcgataccgggtt
gacttccaggggatggacttccagggtgacgacgaggagttcaatctggacgactactga
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