Petromyzon marinus (sea lamprey): 116940540
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Entry
116940540 CDS
T09614
Name
(RefSeq) PDZ domain-containing protein 7-like isoform X1
KO
K21882
PDZ domain-containing protein 7
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmrn03037
]
116940540
04990 Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
116940540
Cilium and associated proteins [BR:
pmrn03037
]
Primary cilia and associated proteins
USH complex and associated proteins
116940540
Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
116940540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116940540
NCBI-ProteinID:
XP_032806385
UniProt:
A0AAJ7SX44
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Position
9:complement(6466068..6495886)
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AA seq
829 aa
AA seq
DB search
MEATAPRTTPGGRPRQAPRDSLLPAEESTALWSRIRSRGLTQPRRRQKLPTAAASGPPGD
SMGWNESAEPRSDAESGEEGGEAQAAELSLTLDRLGHGPMGFSVRGGAEHGLGIYVSRVE
DGSQAAQQGMCVGDRIVAVNGLSVESVTLAAAVSVITSGAGRLRVTVRRVGRVPGFKRSS
EKISWVDVAARHLVNGAAPRDRVVHLRLSPEDPCLGLNVRGGSEFGLGIYVSRVDTGGVA
ERSGIRIGHRIVAANGVNFEGVSHAHAVETLRQHEHVILTIREVGRYPAFQELVEEYSWL
NKVNVHVSPPNAAAAATTMGSALPNGLLPSYQLSPPPPEQHSRAFHDDPLASSDSDALST
RREAYVQTDLDQHRPDGEPQSSDGEDAVVRLSETSRDILLVRPRTFSGGTGEAPQPKSTF
SAKTALLTALSWPRRPARRSQSSRTLTEEETDEKVKKKVKKKLTWVKKQPGTTRSRPVMN
LFRGGRASPLAAVAPRDEGPSAGDGRPPSHAAPRPPYPGTAAPGYPDKDGDLAHAEGSAG
ASSPRPRFVIRPSKTMRKSRRASSRFGSRGLHDAGQQQIEHARLAEEQVVSQDPIEESND
YCPVLRATEKGMPRKQLITSVPDYHGGFLLRPMNEEEEKSRLLRVSLARMKLKPVPKVAS
LEDVSVDDFAGASAASAAPQDGRERGHGLIFLKISKRKQSLGMSISGGRDIVAQPAVRIE
KIFPGGAAAECHLLKVRSSSVSSNSHIHLYIIRSHSTHTKCSSQMDHNTLLNSSRSMNHH
ANSHGHPRSSGFWLAIDGHCIDRRCTFAAICSPTHRCAELVTNCHVLFT
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgacggcgccgcgcacgacacccgggggacgacctcgccaagcgccgagggac
tctctgctccctgccgaagaatccacggccctttggtcaaggatcaggagccgagggctc
acgcagcccaggcggcgacaaaagctccccacggcggcggcgtctgggccccccggggac
tcgatgggatggaacgagagcgcggagcctcgcagtgacgcggagagcggggaggaagga
ggcgaagctcaggcggccgagctgagcctcaccctggacagactcggccacggccccatg
ggattcagcgtccgcggtggggccgagcacgggctgggcatctacgtgagccgcgtggag
gacggcagccaggcggcccagcagggcatgtgcgtgggagaccggatcgtggccgtgaac
ggcctgagcgtggagagcgtgacccttgccgcggccgtgtcggtcatcacgagcggcgcg
ggtcgcctgcgcgtcaccgtgcgccgcgtgggccgcgtgccgggattcaagcgctcgagc
gagaagatctcgtgggtcgatgttgcagccagacaccttgtgaacggggcggcccctcgg
gaccgagtcgtccacctccgcctctcgccagaggacccgtgtctgggtctcaacgtccgc
ggtggcagcgagtttggcctgggcatctacgtgtcaagggtggacaccggcggagtggcc
gagagaagcggaatcaggatcggtcatcggatcgtcgctgcgaatggcgtcaacttcgag
ggcgtgtcgcacgcgcacgcggtggagacgttgaggcagcacgagcacgtcatcctcacc
atccgggaggttggccgttacccagcattccaggagctcgttgaagaatacagctggctc
aacaaggtcaatgtccacgtgtctccaccaaacgctgctgctgctgctactacaatgggc
tcagccttgcccaatgggctcctgccgagctaccagctctcacctcctccccccgagcag
cactcgagagctttccacgatgaccccttggcctcgagtgacagcgacgctctgagcacg
cggagagaagcctacgtacagacagacctggaccagcatcgcccggacggagagcctcag
tcgtccgacggagaagacgccgtggtgaggctgtccgagacgtcccgggacatcttgctg
gtgaggccgcgcacgttttctggcggcacgggggaggccccccagcccaagtcgaccttc
tctgccaagacggccttgctgacggccctcagctggccgcgccggccagcccggaggtcg
cagagctccaggacactcacagaggaggagacagatgagaaggtgaagaagaaagtcaag
aagaagctgacgtgggtgaagaagcagccgggcacgacgaggtcgcgccccgtcatgaac
ctgttccgcggaggccgcgcgagccccttggcggcggtggccccacgcgacgaagggccc
tccgcgggcgacgggcgaccgccctctcacgccgcgccacggcccccgtaccccgggacg
gcggctcccggctacccggacaaggacggagatttggcccacgcggaggggtctgctggc
gcatcatcaccgagaccaagatttgttattcgtccttcaaaaacgatgcggaaaagccgg
cgcgcctcgtctcggtttggctcccgaggcctccacgatgcagggcagcagcagatagag
cacgcgcgactggcggaggagcaggtggtgtctcaagaccccatcgaggaatccaacgat
tactgtccagtgcttagagctactgaaaaaggaatgccaagaaagcagttgatcacttct
gttcccgattaccatggtggatttttgctgagaccaatgaatgaggaggaggaaaagtct
cggctgttacgagtatcgctcgctcggatgaaactcaagccagtaccaaaggtcgcctct
ctggaggacgtctccgtagacgacttcgctggagcctcagcggcgagtgctgctccgcag
gatggcagagaacgagggcacggtctcattttcttaaagatctccaaaaggaagcaatcg
ctcggaatgagcatttctgggggcagagatatcgtggctcagccagccgtgaggattgag
aagatcttccctggtggagctgcggccgagtgccatctattaaaagtgagaagctcctcc
gtgtcctccaactcacacatccatctctacattataaggtcgcactctacacacacaaag
tgctcttcgcaaatggatcacaacaccttgctgaactcgtcaaggagcatgaaccatcac
gcaaactctcacggtcatcctcgcagcagcggcttttggctagccatcgacggtcactgc
atcgatcgcagatgcacttttgcggccatttgctctccaacacaccggtgtgctgaacta
gtaacgaattgccatgttctgtttacgtga
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