Petromyzon marinus (sea lamprey): 116940579
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Entry
116940579 CDS
T09614
Name
(RefSeq) homeobox protein HMX3-like
KO
K09349
homeobox protein Nkx-5
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116940579
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
116940579
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GFIT
Motif
Pfam:
Homeodomain
SH3-A_UBE2O
Homeobox_KN
Cwf_Cwc_15
Spt5_N
Motif
Other DBs
NCBI-GeneID:
116940579
NCBI-ProteinID:
XP_032806455
UniProt:
A0AAJ7SVM5
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Position
9:8831819..8836547
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AA seq
376 aa
AA seq
DB search
MEPRENAAKRPGHSLSKFTIRCILGAQTDGSDCGSEEESDADGRRRGAPAATQAPRGGAA
AAAAAAAATVAQDRHRTGSSRLSEPLEGSRKVACWLQEHQIACCHEVAKRALAGHGVSQE
RIQPQLQQQQPPHQQQHHHHPHQEARAGHATSPAHTEPRSSNSSSSIIIDTPPALTATAP
RLNGAAAPHVVVVVGGGDDDDDDDDDDDDDDDGGGGGGGGDIVVSGDRACESPPQHGSPR
APPKKKTRTVFSRSQVFQLESTFDMKRYLSSAERAGLAASLHLTETQVKIWFQNRRNKWK
RQLAAELEAANLAQVSAAHRLVRVPVLYREGGLHGRAAPAGGVRAPLAFPYPFYYPGGAL
THFSMPYTASSSGLMQ
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagggaaaacgcggccaagaggccaggtcactcgctctccaaattcaccatc
cgatgcatcctgggagcccagacggacgggagcgactgcggcagcgaggaggagagcgac
gcggatgggaggagaaggggggcccctgccgccactcaggctccgagagggggcgccgcc
gctgccgccgctgccgccgccgccactgtggctcaggatcgacatcgcacgggctcctcc
cgtctctctgagcccttggaggggtctcgcaaagtcgcctgctggctgcaggaacaccag
atcgcttgctgccacgaagtggccaagcgagcattggccgggcacggcgtctctcaggaa
aggatccaacctcaactacagcagcagcagccgccgcatcagcagcagcatcatcatcat
ccgcatcaggaggcgagggccggtcacgccacctccccagcgcacacggagccacgcagc
agcaacagcagcagcagcatcatcatcgacactccgccggcgctgacggcaaccgcgcct
cggttaaacggggcggccgcgccccacgttgttgttgttgttggtggcggcgacgatgat
gacgacgatgatgacgatgacgacgacgatgatgacggcggtggcggcggcggcggcggc
gacatcgtcgtgagcggggacagggcctgcgagagcccccctcagcacggcagcccgcgt
gcgccccccaagaagaagacgcggaccgtgttctctcggagccaagtgttccagctggag
tcgacgttcgacatgaagcgctacctgagcagcgcggagcgcgcggggctcgccgcgtcg
ctccacctcaccgagacgcaggtgaagatctggttccagaaccggcgcaacaagtggaag
cgccagctcgccgccgagctcgaggccgccaacctggcgcaggtgtcggcggcgcacaga
ctcgtgcgtgtgcccgtgctctaccgggaagggggcctgcacggaagagcggctcccgcg
gggggcgtcagagccccgctcgcgttcccctaccccttctactaccccggcggtgccttg
acacacttctcgatgccctacaccgccagcagctccggcctcatgcagtga
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