Petromyzon marinus (sea lamprey): 116940650
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Entry
116940650 CDS
T09614
Name
(RefSeq) slit homolog 2 protein-like isoform X1
KO
K06839
slit 2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pmrn00536
]
116940650
Glycosaminoglycan binding proteins [BR:
pmrn00536
]
Heparan sulfate / Heparin
Axon guidance molecules
116940650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
LRR_9
Laminin_G_1
LRRCT
LRRNT
hEGF
LRR_1
EGF_TEN
LRR_14
EGF_Teneurin
LRR_EndoS
LRR_LRWD1
EGF_3
EGF_DL_JAG
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
116940650
NCBI-ProteinID:
XP_032806649
UniProt:
A0AAJ7SW92
LinkDB
All DBs
Position
9:complement(12132524..12326433)
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AA seq
1563 aa
AA seq
DB search
MPGATRPVALLAAAAGLLCLALAGSGAWAACPALCTCTGTTVDCQNLGFRAVPKGIPRNA
ERIDLNGNNITRISKADFGGLRQLRVLQLMENHIVAIERGAFQDLKELERLRLNRNRLAL
LPELLFLGTPKLARLDLSENLIQAIPRKAFRGVTDIKNLQLDNNRISCIEDGAFRALRDL
EVFTLNNNNITSLSVASFNHMPKLRTFRLHSNSLQCDCHLAWLSDWLRQRPRIGLFTQCA
SPANLRGLNVAEVQRKEFVCSDDDEGHSDVSRTQTCSVASSSCPLPCTCANNIVDCRGKG
LTAVPSNLPEAITEIRLEQNGIKSVPPGAFSSYKKLRRIDLSNNQISEIAPDAFQGLRTL
NSLVLYGNKITELPKGLFDGLYSLQLLLLNANKINCVRADAFQDLQNLNLLSLYDNKIQT
MAKGTFSPLRSIQTLHLAQNPFICDCHLKWLADYLHANPIETSGARCASPRRLANKRIGQ
IKSKKFRCSAKEQYSLPGAEDHRSKLGGECFVDSLCPERCRCEGTIVDCSSQRLSRIPEH
LPQYTTELRLNNNDITVLEATGIFKKLTQLRKINLSNNKIADVEEGAFEGAGSVGELLLT
GNQLESVHGAMFRGLEGLKTLMLRSNKLTCVGNGTFAGLGSVRLLSLYDNQIGSITPGAF
ATVHSLSTLNLLANPFNCNCHLAWLGEWLRKRRIVTGNPRCQKPSFLREIPVQDVAAQDF
SCDDGNDENACTPPPRCPAECTCLDTVVRCSNKGLRGLPKGLPRDVTELYLDGNQLTMVP
PELSNYKHLSFIDLSNNHISTIANFTFSNITQLSTLILSYNRLRCLPLRAFAGLKTLRLL
SLHGNDVSMIPHGVFSDLTSLSHLALGSNPLHCDCAMRWLSDWVKVDYKEPGIARCSGPG
DMAEKLLLTTPSKKFECVGPPDVSIQAKCNPCLSQPCLNHGVCSSDPVDFYRCTCSYGFK
GQDCGTPINACVSSPCQNAGTCHVREDGDDSGFQCECPKGFDGKVCQVNIDDCEDNDCEN
NATCVDGINNYTCLCPHEYTAAKKGNEVEKGELCEEKVNLCSEELNPCRHNSKCILTSDG
PRCECAAGFVGEDCAVDHDDCQEHKCQNGARCMDAVDGYACVCPDGFSGPLCEVPPPMVY
LQTSACQYHDCQNGGQCVEAGGEPECQCLQGFVGSRCDKLTSVNFVQRDSYLQLPPIKGQ
PKANISLQVATDEDNGMLLYNGVSEHIAVEIYRGRVRLSYDAGSYPNPTIYSLETINDGE
FHTVEIVTLEQMVNLSIDGGSPKTMIKLGKPASLTLELPLYIGGMPTDVNSAALKQMHDR
NGMGFHGCIRDLYINDELQDLRAPGRPPAGILPGCAPCRQQGACVHGACRAAGPSGHTCE
CEAGWTGAQCDQRSGDPCQANKCVHGACIALDAFSYSCRCADGFVGTLCDEEQRELFNPC
RGVRCKHGTCRISGAGKPFCECSPGYTGDNCDREVSCRGERVLGRLQKQRGYAACQSVQE
VSRVDCKGSCEGTGGGGGGGGGGQCCAALRTKRRRYAFECTDGSSFFEEVEKVVKCGCGR
CHP
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgcccggagcgacgcgccccgtggctctgctcgccgccgccgccggcctcctgtgcctc
gccttggccgggagcggcgcctgggccgcgtgcccggcgctctgcacctgcacgggcacc
accgtggactgccagaacctgggattccgcgccgtgcccaaaggcatccctcgcaacgcc
gagagaatcgacctcaatgggaataacatcacgcgcatcagcaaggcggacttcggaggg
ttgcgccaactacgcgtactgcagctgatggaaaatcacatcgtcgcgattgaacgcggc
gccttccaggacctgaaggagctcgaacgactgcgcttgaacaggaaccgtctcgctctc
cttcccgagctgctcttcctggggacgccgaagctcgcccgcctggacctcagcgaaaac
ctgatccaggccatccccaggaaggcgttccgtggtgtgacggacatcaaaaatctgcaa
cttgacaacaatcgcatctcgtgcatcgaggatggggccttccgtgctctgcgggacctg
gaagtcttcacgcttaataacaataacattacttcattgtcggtggcgagcttcaaccac
atgcccaagctaaggacgttccgactgcactccaacagcctccagtgcgactgccacctg
gcctggctgtccgactggctcaggcagcgcccgaggatcggcctcttcactcagtgcgcc
agccccgccaacctccggggcctcaacgtggcggaggttcagcgcaaggagtttgtgtgc
tcggacgatgacgaaggtcactcggacgtgtccaggacgcagacgtgcagcgtggcctcc
agctcgtgccccctgccctgcacgtgcgccaacaacattgtggactgccgcgggaagggc
ctcacggccgtgccttccaacctgcctgaggccatcaccgagatacgactggaacaaaac
ggcattaagtccgttccccccggtgctttctcatcgtacaagaagctccgtcgaattgat
ctgagcaacaatcagatttccgagattgctccagatgctttccagggcctgcggaccctc
aactcgctggttttgtacgggaataaaatcacggagctgcccaaagggctctttgatggc
ctctattcgctccagctgctgctgctcaacgccaacaaaataaactgcgtccgagcggat
gcgttccaggacctgcagaacctcaacctgctctcgctctacgacaacaagatccagacg
atggccaagggcaccttcagccccctgcgctccatccagacgctgcacctggcgcagaac
ccgttcatctgcgactgccacctcaagtggctggccgactacctccacgccaacccgatc
gagacgagcggggcccgctgcgccagcccgcgccgactcgccaacaagcgcatcggccag
atcaagagcaagaagttccgctgctcggccaaggagcagtactctctaccaggagccgaa
gaccaccgctcgaagctgggtggcgagtgcttcgtcgactcactgtgccccgagcgctgc
cgctgcgagggcaccatcgtcgactgctccagccagcgcctctcccgcatcccggagcac
ctgccgcagtacaccaccgagctgcgactgaacaacaatgacatcacggtgttggaagca
acggggattttcaagaagctcacacagttgcggaaaattaacctgagcaacaacaagatc
gccgacgtagaggagggggcgtttgaaggcgccggctcggtgggagagctcctgctgacg
ggaaaccagctggagagtgtgcacggagccatgtttcggggcctggagggcctcaaaaca
ctgatgctgcgaagcaacaagctgacgtgcgtgggcaacggcacattcgcaggtctcggc
tcggtgcggctgctgtcgctctacgacaaccagatcggcagcatcactcccggagccttc
gccaccgtgcactcgctctccacgctgaatctgctggcgaacccattcaactgtaactgc
cacctggcgtggctgggcgagtggctgcgcaagcggaggatcgtgacggggaacccgcgg
tgccagaagccgtcgttcctgcgtgagatccccgtccaggacgtggccgcgcaggacttc
tcgtgcgacgacggcaacgatgagaacgcctgcacaccgccgccacgctgccctgccgag
tgcacgtgcctggacacggtggtgcgctgcagcaacaagggcctcagggggctgcccaag
ggcctaccccgagacgtcaccgagctttacctggacggaaaccagttaaccatggttccc
ccagagctgtccaactacaagcacctttcgttcattgacctgagcaacaaccacatcagc
accatcgcaaacttcaccttcagcaacatcacccagctctccacactgattttgagctac
aatcgtctaaggtgtcttcctctgcgggcgttcgctggcctcaaaaccctgcgcctcctg
tcacttcacggaaacgacgtctccatgattccccacggcgttttcagcgacctgacgtct
ctctcccatctagcgctgggatcaaacccgctgcactgcgactgtgccatgcgctggctc
tccgattgggtcaaggtggactacaaggagccgggcatcgcgcgctgctcggggcccggg
gacatggccgagaagctgctgctcactaccccctccaagaagttcgagtgtgtcggtccg
cctgacgtcagcatccaggccaagtgcaacccgtgcctgtcgcagccatgcctcaaccac
ggcgtgtgcagcagcgaccccgtcgacttctaccgctgcacctgctcctacgggttcaag
ggtcaggactgcggaacgccgatcaacgcatgcgtgagctcgccgtgccagaacgcgggc
acgtgccacgtgcgcgaggatggtgacgactccggattccagtgcgagtgccccaagggc
ttcgatggaaaagtttgccaggtgaacatcgacgattgcgaggacaacgactgtgagaac
aacgccacctgcgtggacggcatcaacaactacacctgcctgtgtccgcacgagtacaca
gctgctaaaaagggcaatgaagttgaaaaaggggaattgtgcgaggagaaggtaaacctg
tgctccgaggagctgaacccatgccgccacaactccaagtgcatcctcacttccgacggg
cccaggtgcgagtgcgccgccgggttcgtgggcgaggactgcgccgtcgaccacgacgac
tgccaggagcacaagtgccagaacggcgcgcgctgcatggacgcggtcgacggctacgcc
tgcgtgtgccccgacgggttcagcgggccgctgtgcgaggttccgcctcccatggtgtac
ctgcagacgagcgcgtgccagtaccacgactgccagaacggcgggcagtgcgtggaggcg
ggcggcgagcccgagtgccagtgcctgcagggctttgtggggtcgcgctgcgacaagctg
acgagcgtcaacttcgtgcagcgcgactcctacctccagctgccgcccatcaaggggcag
cccaaggccaacattagcctgcaggtggccacggacgaggataatgggatgcttctgtac
aatggcgtgagcgagcacatcgccgtggagatctaccgcggccgcgtgcgtctcagctac
gacgcgggcagctaccccaaccccaccatctacagcctagagacgataaacgacggggag
ttccacaccgtggagatcgtcacgctggaacagatggtgaacctgtccatcgatggaggc
tcccccaaaaccatgatcaaactgggcaagcctgcctccctcaccctggagttgcccctg
tacattggtggcatgcccacggacgtgaacagcgcggcgctcaagcagatgcacgaccgc
aacggcatgggcttccacggctgcatccgcgacctctacatcaacgacgagctgcaggac
ctgcgcgcgccaggccgcccgcccgccggcatcctgcccggctgcgcgccgtgccgccag
cagggcgcgtgcgtccacggcgcctgccgcgccgccgggccctcggggcacacgtgcgag
tgcgaggccgggtggacgggcgcccagtgcgaccagcgctccggcgacccctgccaggcc
aacaagtgcgtgcacggtgcgtgcatcgcgctcgacgcgttctcctacagctgccgctgc
gccgatggcttcgtgggcacgctgtgcgacgaggagcagcgcgagctcttcaacccgtgc
cgcggcgtgcgctgcaagcacggcacgtgtcgcatctcgggcgctggcaagccgttctgc
gagtgcagccccggctacaccggggacaactgtgacagggaagtgtcgtgccgcggcgag
cgcgtgctgggcaggctgcagaagcagcgcggctacgccgcgtgccagagcgtgcaggag
gtgtcgcgcgtcgactgcaagggcagctgcgagggcacgggcggaggcggcggaggcggt
ggtggcggtcagtgctgcgcagcgctacgcacgaagcgccgccgctacgccttcgagtgc
accgacggctcctccttcttcgaggaggtggagaaggtggttaagtgcggctgtgggcgc
tgccacccataa
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integrated database retrieval system
