Petromyzon marinus (sea lamprey): 116940686
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Entry
116940686 CDS
T09614
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03020
RNA polymerase
pmrn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116940686 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
116940686 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmrn03021
]
116940686 (POLR2B)
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116940686 (POLR2B)
Enzymes [BR:
pmrn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116940686 (POLR2B)
Transcription machinery [BR:
pmrn03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
116940686 (POLR2B)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
116940686 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
116940686
NCBI-ProteinID:
XP_032806717
UniProt:
A0AAJ7SYA7
LinkDB
All DBs
Position
9:complement(13971787..13999795)
Genome browser
AA seq
1176 aa
AA seq
DB search
MYDPDEDVQYDEDDDENEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRI
VEDAPPIDLQAEAQHATGVVEVPPRYMLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNL
TYSAPLYVDITKTVIREGDDPIETQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECP
LDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTAECRSCLENSSRPTSTIWVS
MLARGGQGVRKSAIGQRIVATLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMM
EMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEILQKEVLPHVGVSDFCE
TKKAYFLGYMVHRLLLAALGRREVDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRMY
AQKFIDRGKDFNLELAIKTRIVTDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST
LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQP
SPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIV
SEVSMVRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKDREYNNYTWQDLVA
SGVVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINS
IVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDMEEVFERPTRDTCQ
GMRHAIYEKLDDDGLISPGIRVSGDDVIIGKTVTLPDNEDELEGQTKRFTKRDCSTFLRT
SETGIVDQVMVTINQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTC
EGLSPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDTVNVQKISNLLHEY
GYHLRGNEVLYNGFTGRKMTSQIFMGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGR
SRDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYQVHVCNLCGLMAIANTRTHTYECR
GCRNKTQISLVRVPYACKLLFQELMSMSIAPRMMIT
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccccgacgaggatgtgcagtacgacgaagatgacgacgagaatgagatcaca
ccggacttgtggcaagaggcgtgctggatcgtcatcagctcgtactttgatgagaagggg
ctggtgcggcagcagctggactccttcgatgaattcatccagatgtcggtgcagcggatc
gtggaggacgccccgccaatcgacctgcaggctgaggctcagcacgccaccggggtggta
gaggttccgccgcggtacatgctcaagttcgagcagatctacctgtcgaagcccacacat
tgggagagagacggagcgccatcacccatgatgcccaacgaggccaggctccgcaacctc
acttactcggccccgctgtacgtggacatcacaaagacggtgatccgggaaggggatgac
cccatcgagacgcagcaccagaagacattcatcggcaagatccccatcatgctgcgctcc
acatactgcctgctgagcggcctcaccgacagagatctctgcgagctcaatgagtgcccc
ctcgaccccggagggtatttcatcatcaacggctccgagaaggtgctcatcgcacaagag
aagatggccaccaacacggtgtacgtgttcgccaagaaggactccaagtatgcgtacacg
gcggagtgccgctcgtgtctggaaaactcgtcccggcccaccagcaccatctgggtcagc
atgctcgccaggggaggacagggtgtgcggaagagcgcgattgggcagcgcatcgtggcc
acgttgccgtacatccgccaggaggtgccgatcatcatcgtgtttcgcgcgctgggcttc
gtgtccgaccgcgacatcctcgagcacatcatctacgactttgacgaccccgagatgatg
gaaatggtgaaaccgtctctggacgaagccttcgtcatccaggagcagaatgtggcgctc
aacttcatcggctctcgtggtgcgaagcctggcgtcaccaaggagaagcgaatcaagtac
gccaaggagatcctgcagaaggaggtgttgccccacgtgggtgtcagcgacttctgcgaa
accaagaaggcgtacttcctcgggtacatggtccacaggctgctacttgccgcgctgggt
cgccgggaggtggacgatcgagatcactatggcaacaagaggctggacctggctgggccc
ctgttggcgttcctgttccgggggatgtttaaaaacttgctgaaggaggtgcgcatgtac
gcacagaagttcatcgaccggggaaaggacttcaacttggagctggcaatcaagacgcgc
attgtgaccgacggactcaaatactcgctcgccaccggcaactggggcgaccagaagaag
gcccaccaggctcgcgccggcgtgtctcaggtgttgaaccgcttgacgttcgcatccacc
ctgtcccatctgcggcggctgaactcccccatcggccgtgatgggaaactcgccaagccg
cgtcagctgcacaacacactgtggggcatggtgtgccccgctgagaccccagagggccac
gccgtggggctggtgaagaacctagcactcatggcgtacatctcggtgggctcgcagccc
tcgcccatcctcgagttcttggaggagtggagcatggagaacctggaggagatttcaccc
gccgccatcgccgatgccacgaagatctttgtgaacggctgttgggtgggaattcacaag
gatcccgagcagttgatgaacaccctgaggaagctgagacgtcagatggacatcatcgtg
tctgaggtgtccatggtgcgcgacatccgcgagcgggagatccgcatttacacggacgct
gggcggatctgccgacccctgctcattgtcgagaagcagaagttgctgctcaagaagagg
cacattgatcaactgaaggaccgcgagtacaacaactacacgtggcaggacctggtggcg
agcggtgtggtggagtacatcgacacgctggaggaggagaccgtcatgctcgccatgacc
cccgatgacctgcaggagaagggcgtggcctactgctccacgtacacccactgcgagatc
cacccctccatgatcctgggcgtgtgcgcctccatcatcccattccccgaccacaaccag
tctccccgaaacacgtaccagtcggccatgggcaagcaggcgatgggcgtgtacatcacc
aacttccatgtgcgaatggacacgctggcccacgtgctctactacccacagaagccgctc
gtcaccacgcgctccatggagtacctacgattcagggagctgcctgcggggattaattcc
atcgtcgccattgcctcctacacgggatacaaccaagaggattccgtcatcatgaacaga
tcagccgtcgaccggggtttctttcggtccgtgttctaccgctcgtacaaagagcaggag
tcgaagaaaggatttgacatggaggaggtgtttgagaggccaactcgagacacctgccag
ggcatgcggcacgccatctacgagaagctggacgacgatggcctcatctcgcccggcatc
cgcgtgtcgggcgacgacgtgatcatcggcaagacggtgacactgccggacaatgaggac
gagctggagggtcagaccaagcgattcaccaagcgcgattgctccaccttcctgcgcacc
agcgaaacgggcattgtcgaccaggtcatggtcaccatcaaccaggagggatacaagttc
tgcaagattcgggtgcggtcagtgcggatcccacagattggagacaagttcgccagtcgg
cacggacagaagggcacatgcggcattcagtaccggcaggaggacatgccgttcacgtgc
gaaggcctctcgccggatatcatcatcaacccgcacgccatcccgtctcgaatgacagtc
ggtcacttgatcgagtgcctccagggcaaggtgtcggcgaacaaaggcgagatcggcgat
gccacaccgttcaacgacacggtcaacgtgcagaagatctccaacctactgcacgagtac
ggctaccacctgcgtggaaacgaggtgctgtacaatggcttcacgggccgcaagatgacg
tcgcagatcttcatgggacccacgtattaccagcgcctcaagcacatggtggacgacaag
atccattcgcgcgcccgtgggcccgtgcagatcctcaaccggcagcccatggaggggcgt
tcgcgcgacggcgggctgcgtttcggcgagatggagcgcgattgccaaatcgcgcacggc
gccgcgcagttcctgcgcgagcggctgttcgaggtgtccgacccctaccaggtgcacgtg
tgcaacctgtgcggcctcatggccatcgccaacacacgcacgcacacctacgagtgccgc
ggctgccgcaacaaaactcagatctcgctggtgcgtgtgccatacgcctgcaagttgctt
ttccaggagctcatgtctatgagcatcgctccacggatgatgatcacataa
DBGET
integrated database retrieval system
