Petromyzon marinus (sea lamprey): 116940733
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Entry
116940733 CDS
T09614
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116940733 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116940733 (LSM1)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116940733 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
116940733 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
116940733
NCBI-ProteinID:
XP_032806805
UniProt:
A0AAJ7SXW4
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All DBs
Position
9:16093772..16099446
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTIERIHVGKRYGDIP
RGIFVVRGENVVLLGEIDADKEQETSLERVSIEAILEAQREEQQDKAEAEKAKIKALKER
GLPLPRADTTEEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgcccggcacggcgagcctcatcgaggacatcgacaagaaacacctcgtg
ctgctgcgggacgggcgcacgctcatcggcttccttaggagcattgaccagttcgcgaac
ttggtgctgcaccagaccattgagcggatccatgtagggaagaggtatggggacatcccg
cgtgggatctttgtggtgcgcggtgagaacgttgtcctgctcggcgagattgacgcggac
aaggagcaggagacgagccttgagagggtgtccatcgaagcaatcctcgaggcccagcgc
gaggagcagcaggataaagccgaggctgagaaggccaaaataaaggccctcaaggagcgg
ggccttccccttccacgtgcagacactaccgaggagtactag
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integrated database retrieval system
