Petromyzon marinus (sea lamprey): 116940775
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Entry
116940775 CDS
T09614
Name
(RefSeq) poly(rC)-binding protein 3-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116940775
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116940775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
KH_Vigilin
MOEP19
Motif
Other DBs
NCBI-GeneID:
116940775
NCBI-ProteinID:
XP_032806844
UniProt:
A0AAJ7SWH0
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Position
10:complement(84083..107439)
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AA seq
423 aa
AA seq
DB search
MSHLGGQAEGGLNVTLTIRLLMHSKEVGSIIGKKGDFVKRIRDESGSRINISDGNCPERI
VTVTGPTEAIFRAFTMMTHKLEEQDMISTMANSVVMNRPPVTLRLVVPASQCGSLIGKSG
NKIKELRESTGAQVQVAGDLLPNSTERAVTISGTPDAIVQCMRQICLVMLESPPKGATIP
YRPKTSTTNNPVIFAGGQAYTVQGQYAIPNPDLTKLHQLAMQHTPYTPMTQQTPTGFSPT
AEGVDSNSQISTHEISIPNDLIGCIIGKQGSKINEIRQMSGAQIKIANAIEGSTDRQVII
TGSSANISLAQYLINASLELAIPPSPIIAPVSSQLNSTLPTPSPVESLLAVTSIPPSTPL
SAAATPSSPLLLPVAGLVDTLSLPTIQPCQAGSDHASNASGEGQTNKFPANMDVKSEHRY
KPY
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatctcggtggccaagccgagggtggacttaatgtgacgcttacaattcgtctt
ctcatgcacagcaaggaagtgggaagcatcataggcaagaaaggggattttgtgaagaga
atccgtgatgagagcgggtctcgtattaacatctcggatgggaactgtcctgagcgtatt
gtcacggtcactggtcccaccgaggctattttccgtgctttcacaatgatgacccacaag
ctggaggagcaggacatgatcagcacgatggcgaacagcgtagtgatgaaccgcccaccg
gtcaccttgcgcctcgtggtgccggccagccagtgcggctctctcattggcaagagcggg
aacaagatcaaagagctgcgagagtcaacaggtgcccaagtccaggtggctggagatttg
ctgccaaattctaccgagcgggctgtgaccatctctggcacaccagatgccatcgtgcag
tgcatgaggcagatctgccttgttatgctggagtctcctcctaagggtgccacgatccct
taccgccccaaaacatccaccaccaacaatccggttatttttgctggaggccaggcctac
acagttcaaggacagtatgctatccccaatccagatctgacaaagctgcaccagttggct
atgcagcacactccatacactcctatgactcagcaaaccccaacaggcttctccccgact
gctgagggtgttgactcgaatagccaaatcagcacacacgaaatcagcattccaaatgat
ttaattggatgcatcattgggaaacaaggctcaaaaatcaatgagattcgtcaaatgtct
ggtgctcagattaagatagccaatgccattgagggatccactgatcggcaggtcatcatt
acgggatcctcagccaacataagtctggctcagtacctcattaatgcaagcctggaattg
gctattcctccttctcccattatcgcccctgtgtccagccaactgaacagcacccttcct
acccccagcccagtggagtctctccttgctgtcacctccatcccaccctccacccctctc
tctgctgctgctactcccagctccccgctgttgctgcctgtagcaggccttgtagacaca
ctttcactcccaacgattcagccctgccaggcaggaagcgatcacgcctccaatgcaagt
ggggaaggtcaaacaaataaattccctgctaacatggacgtcaaaagtgaacatcgctat
aagccttattga
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