KEGG   Petromyzon marinus (sea lamprey): 116940900
Entry
116940900         CDS       T09614                                 
Name
(RefSeq) ras-related protein Rab-11B
  KO
K07905  Ras-related protein Rab-11B
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    116940900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmrn04131]
    116940900
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmrn04147]
    116940900
   04031 GTP-binding proteins [BR:pmrn04031]
    116940900
Membrane trafficking [BR:pmrn04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    116940900
Exosome [BR:pmrn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116940900
  Exosomal proteins of other body fluids (saliva and urine)
   116940900
  Exosomal proteins of colorectal cancer cells
   116940900
GTP-binding proteins [BR:pmrn04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    116940900
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_22 PduV-EutP AAA_16 ABC_tran AAA_14 NTPase_1 TniB Gtr1_RagA FeoB_N AAA_24 DUF3289 FAD-SLDH AAA_21
Other DBs
NCBI-GeneID: 116940900
NCBI-ProteinID: XP_032807149
UniProt: A0AAJ7SXP2
LinkDB
Position
1:complement(32874153..32889675)
AA seq 222 aa
MTAKMGARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD
GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN
IVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEAAFQNILAEIYRIV
SQKQISDRAGHDDSPSNNVVDITVPPTSEHGKSNRFQCCQSL
NT seq 669 nt   +upstreamnt  +downstreamnt
atgacggccaagatgggagccagggacgacgagtacgactacctcttcaaagtggtgctg
attggagactccggcgtgggaaagagtaatctgctgtcgcgcttcacgcgcaacgagttc
aacctggagagcaagagcaccatcggcgtggagttcgccacgcgcagtatccaggtggac
ggcaagaccatcaaggcgcagatctgggacacggccgggcaggagcgctaccgtgccatc
acctccgcttactatcgtggagcggtgggcgcgctactggtgtacgacatcgccaagcac
ctgacgtacgagaacgtggagcgctggctcaaggagctgcgcgaccacgccgacagcaac
atcgtcatcatgctcgtgggcaacaagagcgacctgcggcacctgcgcgccgtgcccacc
gacgaagcgcgcgccttcgccgagaagaacaatctttcgttcatcgagacgtccgctttg
gactccacgaatgtcgaggccgcctttcagaacatccttgcggagatctaccggattgtc
tctcagaagcagatctcggaccgggccggccatgacgattccccgagcaacaacgtggtg
gacatcaccgtgccccccacctcggagcatggcaaatccaaccgcttccagtgctgccag
agcctctga

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