Petromyzon marinus (sea lamprey): 116940907
Help
Entry
116940907 CDS
T09614
Symbol
FANCI
Name
(RefSeq) Fanconi anemia group I protein isoform X1
KO
K10895
fanconi anemia group I protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116940907 (FANCI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116940907 (FANCI)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
116940907 (FANCI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S1
FANCI_S2
FANCI_S3
FANCI_HD1
FANCI_S1-cap
DUF2099
Motif
Other DBs
NCBI-GeneID:
116940907
NCBI-ProteinID:
XP_032807162
UniProt:
A0AAJ7SX27
LinkDB
All DBs
Position
1:complement(32907089..32935025)
Genome browser
AA seq
1369 aa
AA seq
DB search
MDKRMLLMLEQGDSASLQKELEALPNGELEELIKRHAVRGEGDLNALLRAIFLGSPCHSG
DGVERRLKTYTCCAKLAESGDMENYVAVNMMGLLMMETDYLPGSCLAKLASMYVDSIKSG
RVMNGRSLDLLPNILSSLGSREKITYGEGQLSGMEYKKQIINTLCSSRWDSQCVIHLTSM
FRDVPLSQEELQFVMEKVLRLLPSLELQELPPLVYQLLLLAPKSHKKLALEGIVSFFKEQ
DLLHSNQKSTEDATELEVAAMSTVPLRHVEGTIILHIVFAVKLDQDLGREFIKTLKVGQL
GDVGRVLCPFNVALTLSLARIHRLEEQVFEMMKVAILKSFRDQQMQQSSALIKDLVSSQV
WCVSDVILETIQNSGWDHISQGLVQLGFTLMDSFGPKAGPGGKVAETGAGVSRTPAQQAC
SLGARVLLETFKAHDLVRREILEQLLNRVVTKATVPITHYLELLSDMVTSAPLNLLECLP
KVQEAFDYLSVLPSPVTKGLLQAILPLLRVRINLKDSLILALRKGMFSSQLEARKSSVIG
YLLLLKNFKVLGSLASSQTLSSQGFSASQVKVEVHARLNPAANEALCLEILGSLRRCLIQ
QADVRLLFYEGLYDVLRRNSKLGSTILQMLLVQLKRCYEAGDVLPPVRLDGCITAQGEQV
FLQEPLGHLLCCTVHCVMKWREIKAQTVGDDEDDEDDDDDGGGEGSSEYAGEGAQSCQRQ
LETMLESMTRRMIKSDLDDFELDKSADFSLTTSVGVKNNIYVILVMGMYEVLMEYSFIMG
DPSRQKVEQVLGLFQRYHKLVEILREKSAKGKGGATSKTPRSLLSLRCIDLLLSALYCDE
SSDHEAMLAPLRGSVEFQRYVLAVVQQKVQQAEEIGHVDGPDGQDPDKVLRHLVSIARAL
LRKCFSVAVPTNDSSVVSSGVVESVAKKDKHKGIPLLCLDVLQRVITAVNTRFSHKKESL
YAALDLSREDPEDADNVIIAERAAFHMRQFQRSVVGQLSGGEEDLNMKELHGLVSLLLAL
SKELQPGSTEFEQCLNWTTKICKESKIEDLLLCKMLMNLLFSLHLAHKGPRSLLKDLAQD
IHSQLGDIDEDVQVENQSIYAIVNSKTAPSVTLVVLSHAEHMLEDVEWLIARLRGELAYA
KPVTSEEGTQDLGPRQAQERAAAVQLGALVTCCHELVQAALPAGSCSTNLLKLLTKMYSV
LASITKYYLQVYTQNIGDLPGRFEKLVKLSGSHLTPQCYAMITYIQSVQSDSLNHSSDKK
SKRGAAALASAAKAKVLRETRPIPNLIFYIEQYECFLIQLSKKSKVNLMEGMKPSTSRDF
RINAATLKEALENQDSDNEDATQSGDGTQSTTISVQEKSQKPPNKKRKT
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaggatgctgctgatgttggagcagggagactctgcctccctgcagaaggag
ctggaggcgctgcccaatggagagctggaggaactaatcaagcggcatgcagtcaggggc
gaaggtgacctcaacgccctgctcagggccattttcctcggctccccgtgccacagcggt
gatggggttgagcgtcggctgaagacgtacacgtgctgcgcaaagctggccgagtctggg
gacatggagaactatgtggcggtcaacatgatggggctgctcatgatggagacggattac
ttgcctggaagttgcctggccaagttggcctccatgtacgtggactcgattaagagcggc
cgcgtgatgaacggcagatcccttgatctgcttcccaacatcctaagctctctgggctcc
agggagaaaatcacttacggtgaaggacagcttagtggcatggaatacaaaaaacagatc
atcaacacattgtgttccagcaggtgggactctcagtgtgtgatccatctgacttctatg
ttcagggacgtgccgctgagtcaggaggagctgcagtttgtcatggagaaggtattgcgg
ctgctgcccagtctggagctgcaggagctgcctcccctcgtttaccagctgctcctcctt
gctcccaagagccataagaagctggcgctggaggggattgtttcattcttcaaggagcag
gacctgttgcacagtaaccaaaagagcactgaggatgccacggagctggaggtagctgcc
atgtcgacggttccattgcgtcacgtggaggggaccatcatcctccacatcgtctttgct
gtcaagctggaccaggacctgggcagagagttcatcaagaccctcaaggtcggacagctg
ggcgatgtgggccgagtgctgtgtccgttcaacgtcgcactcacactctcgctggcgagg
attcaccgattggaggaacaggtgtttgagatgatgaaggtggctatcttgaagagcttc
agggaccagcagatgcagcagagctcggcgctcatcaaggacctggtgtcgtcgcaggtg
tggtgcgtgtccgacgtcatcctcgagaccatccaaaacagcggctgggaccacatatcg
cagggcttggtgcagctcggcttcacgctcatggactcatttgggcccaaggcgggaccc
ggcggcaaggtggcggagacgggcgccggcgtgtctcggacgccggcgcagcaagcctgc
agcctgggggcacgcgtcctcctcgagacgttcaaggctcatgacctcgtgagacgtgag
atcctggagcagcttctcaacagagtcgttactaaagccaccgtgccaatcacacactat
ttagagctgctgtcagacatggtgacgtcggccccgctcaacctgctggagtgtctgccc
aaggtgcaggaggcgtttgattatttgtcagtcctgccgtctcccgtcacgaagggcctg
ctgcaggccatactgccccttctcagggtgcgcatcaacctcaaggactcgctgatcctc
gcactgcgcaagggtatgttctccagccagctggaagccagaaaatcatctgttatcgga
tatctcctgctgctcaagaacttcaaagtgctgggcagcctagcatcaagccaaacattg
agcagtcagggtttttccgctagccaggtgaaagtggaggtgcacgcacgcctcaaccct
gccgccaacgaggccctgtgcctggagatcctgggcagcctgcgccgctgcctgatccag
caggccgatgtgcgcctgctgttctatgaaggtctctatgatgtgctgcggagaaactcg
aagctggggagcaccatcctacagatgttgctggtacagctgaagcggtgctacgaggca
ggcgacgtcctgccgcccgtacgtctggatggctgcatcacggcacagggcgagcaggtc
ttcctccaggagccgctgggccacctcctctgctgcactgtgcactgtgtgatgaagtgg
cgtgaaatcaaggctcagacagttggcgatgatgaggatgacgaggacgatgatgacgat
gggggcggtgagggcagcagtgaatacgcaggggagggcgcacagagctgtcaacggcag
ctggagacaatgctggagtccatgacacggaggatgatcaagagtgacctggacgacttt
gaattggacaagtcggcagatttttcgctgacgaccagcgtaggggtgaagaacaacatc
tatgtcatcttggtaatgggcatgtatgaggtgctcatggagtacagcttcatcatgggc
gatcccagccgccaaaaggtggaacaggtgctggggttgtttcagcgctaccataagctg
gtggaaattctgcgcgagaagagtgcaaagggcaagggcggcgctacgagcaagacgcca
cgcagcctgctatcgctgcgctgcattgatctcctgctctccgcgctctactgcgacgag
agctccgaccacgaggcaatgctggcgccgttgcgtggcagcgtggagttccagcgctac
gtgctggcggtggtgcagcagaaggtgcagcaggcggaggagattggccacgtggacggc
cccgacggacaggaccccgacaaggtgctgcgtcacctggtctccatcgcccgggcgctg
ttgcggaagtgcttctctgtggcggtgcccacgaatgactcgtcggtggtatcgtcgggg
gtggtggagtccgtggccaagaaggacaagcacaaggggattccgctgctgtgcctggac
gtgctgcagcgcgtcatcaccgccgtgaacacacgcttctcccacaagaaggagagccta
tacgccgcgctcgatctatcccgtgaagatccagaggatgcagacaacgttatcattgcg
gaaagagctgcgtttcacatgaggcagttccagcggagtgtggttgggcagctgtcggga
ggtgaggaagatctgaacatgaaggagctccatgggctagtgagccttctgctggcgcta
agcaaggagctgcagccaggctctaccgagtttgaacagtgcttgaactggacaaccaaa
atttgcaaggagagcaaaattgaggacctgctgctgtgcaaaatgctgatgaacctgctc
ttcagcctgcacttggcccacaaggggcctcgctcactgctcaaggatctggcgcaggac
attcacagccagctgggcgacatagacgaggatgtgcaggtggaaaaccagtccatttat
gccatcgtgaattccaagactgctccttcagtaactctggtggtgctgtctcatgcagag
cacatgctggaggacgtggaatggctcattgcccggctcaggggggagctggcgtatgcc
aagccggtgacctccgaggagggcacgcaggatctgggtccccggcaggcgcaggagagg
gcggccgccgtgcagctgggagcgctggtcacctgctgccacgagttggtgcaggcggcg
ctgcctgcgggcagctgctccaccaacctgctcaagctgctcaccaagatgtacagtgtg
ctggcttccatcaccaaatactatttacaggtgtatacgcagaatataggggacctgcca
gggaggtttgaaaagttggtgaaactgtcaggatcccatcttactcctcagtgctacgca
atgatcacctacattcagagcgtgcagagtgatagcctcaaccacagctcggacaagaag
agcaagcgcggggcagcggccttagccagcgccgccaaggctaaagttctgcgggaaaca
cggccgatcccaaacctaatcttctatatcgagcagtacgagtgtttcctcatccagctc
tcaaagaaatccaaggtgaacctgatggaggggatgaagccgagcacgtcgcgcgacttc
cgcattaatgcggcgacgctgaaggaggcgctggagaaccaggattcggacaatgaagac
gcgacgcagagcggagacggcacacagagcacaactatttcagtgcaggaaaaatcccaa
aagcctcccaacaagaagaggaagacttaa
DBGET
integrated database retrieval system
