KEGG   Petromyzon marinus (sea lamprey): 116940940
Entry
116940940         CDS       T09614                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A3-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116940940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmrn03019]
    116940940
   03041 Spliceosome [BR:pmrn03041]
    116940940
Messenger RNA biogenesis [BR:pmrn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     116940940
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     116940940
Spliceosome [BR:pmrn03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    116940940
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3
Other DBs
NCBI-GeneID: 116940940
NCBI-ProteinID: XP_032807231
UniProt: A0AAJ7WRA3
LinkDB
Position
10:8531296..8538680
AA seq 362 aa
MPMDHNGDEQQRKLFIGGLSFETTEDSMRKHFEQWGTLTDCVVMRDPHTKRSRGFGFVTY
TCPEEVDAAMDARPHHLDNRVVEAKRAISREDSLKPGAHLKVKKIFVGGIRDDTDEQHLR
EYFQVYGDVEAAEVMEDRSTGKKRGFGFVTFSDHDTVDKVIVQKYHTINGHKAEVRKALS
KQEMNSSGGPRGGSRGGRGSYGSRGGGGGGYGGGYGGGGGYGGDGYNGYGGGGAGGYGGG
GGGGYSDRGGSYGGYGNQGGGYGGGGGGYDNYGGGSSYGGAGNYGGSSGGGYGGGGGDFG
NYNQQQSSYGPMKSGGGGGSYGGRNSSGPYGGGYGSGGGSSGSGGGGYGGGGGGGGGGRG
RY
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgccaatggatcacaacggagatgaacaacagcgtaagctgtttatcggtggcctcagc
ttcgagaccacggaggacagcatgcggaagcatttcgaacaatggggcacgctaacagac
tgcgtggtgatgagggatccgcacacaaagcggtcacgtggctttgggttcgtcacctac
acgtgtcccgaggaggtggacgccgccatggacgcacgaccccaccacctggacaaccgc
gtggtggaagccaagcgcgccatctctcgcgaggactccctaaagccgggagcacacctc
aaggttaagaagatctttgtgggaggaattcgcgacgacacggacgagcagcacctgcgc
gagtacttccaggtgtatggtgatgtggaggcagcggaggtgatggaggatcgttctacc
ggcaagaagaggggatttggcttcgttacgttttctgatcacgacaccgtggacaaggtc
atcgtgcaaaagtaccacaccatcaatggtcacaaggcagaagtgcggaaggcactttcc
aagcaagagatgaactccagtggaggccccagaggtggaagccgtggagggagaggaagc
tatggaagccggggtggtggtggcggtggttatggaggtggctatggtggtggtggtgga
tacgggggtgacggctacaatggatatggtggtggtggtgcaggtgggtatggtggtggt
ggaggaggagggtacagtgaccgtggaggctcctatggaggctatgggaatcagggaggt
ggatacggaggtggcggaggagggtacgacaactatggaggtggctctagctacggtggt
gcaggtaattacggtggtagcagtggggggggttatggtggtggaggtggggactttggc
aattacaatcagcagcaatcgagctatggtcccatgaagtcgggtggtggcggcggcagc
tatggaggaaggaactcaagtggaccgtatggtggtggatacggttcaggtggtggcagc
agtggaagcggtggcggcggttatggtggtggtggcggcggtggtggaggaggacggggc
cgatactaa

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