Petromyzon marinus (sea lamprey): 116940942
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Entry
116940942 CDS
T09614
Name
(RefSeq) retinoic acid receptor beta-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116940942
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pmrn03310
]
116940942
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116940942
Nuclear receptors [BR:
pmrn03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
116940942
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
TFIIA
Motif
Other DBs
NCBI-GeneID:
116940942
NCBI-ProteinID:
XP_032807244
UniProt:
A0AAJ7WRG3
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Position
10:complement(8546629..8651776)
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AA seq
556 aa
AA seq
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MASSSSLSNGGGGAGGGGGFVGPNGASGGFPMPVPYPFLFPASFPGSLAGHYRQQQQHQQ
YQQHQQQLQHQQLQHQQQRLQQHHLRSPHPPASLAPVLLPPPPLPMGCGRSSSPSTIDTQ
SSSSGSEELLPSPPSPPPPPRTYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVY
TCHRDKNCVINKNTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKRKEAPVAVAAAVRSPEV
PPERHELSCEQEQLVDKIRKSHQETFPSLCQLGKYTTNSCADHRVQLDLGLWDKFSELST
KCIVKIVEFAKRLPGFPSLTIADQITLLKAACLEILILRICTRYTPEQDTMTFSDGLTLN
RTQMHNAGFGPLTDYVFAFAAQLLPLEMDDAEAGLLSAICLICGDRQDLEDPHKVERLQE
PLVETLKLYVRRRRPTKPHMFPKMLMKITDLRGISAKGSERVITLKMEIPGSMPPLIQEM
LENMDNAEELSPAPAPVVCKGSGAADLSDTRVTTASEDTGDGDAEDVKPGKRALDGLESP
PCLAVPVGQTSLAPPF
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagcagcagccttagcaacggcggtggcggcgccggcggaggaggaggcttc
gtcgggccgaatggcgccagcggagggtttcccatgcccgtgccgtaccccttcctcttc
ccggcgagtttccccggatcgctggcgggacactaccggcagcagcagcagcaccagcag
taccagcagcaccagcagcagctgcagcaccagcagctgcagcaccagcagcagcgactc
caacagcaccacctgcgcagtccgcatccgcccgctagccttgcccccgtgctgctgccg
cctcctccgctgcccatgggatgtggtcggagctcttcgcccagcaccatcgacacgcag
agcagcagcagcggctcggaggagttgctgcccagccctccctcgcctccgcctccacca
cgcacctacaagccatgcttcgtgtgccaggacaagtcctccggctaccactacggcgtc
agttcctgcgagggatgcaagggctttttccgccggagcatccagaagaacatggtgtac
acatgccaccgggacaagaactgtgtcatcaacaagaacacgcgcaaccgctgccagtac
tgccgcctgcagaagtgcttcgaggtcggcatgtccaaggaggcggtgaggaacgaccgc
aacaagaagcggaaggaggcgccggtggcggtggcggcggcggtgcgcagccccgaggtg
ccgcctgagcggcacgagctgagctgcgagcaggagcagctggtcgacaagatccgcaaa
tctcaccaggagactttcccgtcgctctgccagcttggcaagtacaccacgaactcatgc
gcggaccaccgcgtgcagctggacctgggcctgtgggacaagttcagcgagctctccacc
aagtgcatcgtcaagatcgtggagtttgccaagcgcttgccggggtttcccagcctgacc
atcgccgaccagatcacgctgctcaaggcagcctgcctggagattctgatcttgaggatc
tgcacgcgctacacgccggagcaggacacgatgacgttctcggacgggctgacgctcaac
cgcacgcagatgcacaacgcgggattcgggccgctcaccgactacgtgttcgccttcgcg
gctcagctgctgccgctggagatggacgacgcggaggccgggctgctcagcgccatctgc
ctcatctgtggagaccggcaggacctggaggacccacacaaggtggagcggctgcaggag
ccgctggtggagacgctgaagttgtatgtgaggcgacgccggcccaccaagccgcacatg
ttccccaagatgctcatgaagatcaccgacctccgtggcatcagcgccaaaggttcggaa
cgcgtgatcacgctgaagatggagatcccaggctccatgccgccgctcatccaagagatg
ctcgagaacatggacaacgcggaggagctgtcgccggcgcccgcgccggtggtctgcaag
ggcagcggcgcggccgacctgtcggacacgcgcgtcacgaccgcaagcgaggataccggt
gacggcgatgccgaggacgtgaagcccggcaagagggccctggacggtctggagtctccg
ccttgcttggctgtgcccgtgggacagacgtcgcttgcgccaccgttttga
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