Petromyzon marinus (sea lamprey): 116940966
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Entry
116940966 CDS
T09614
Name
(RefSeq) LOW QUALITY PROTEIN: chondroitin sulfate synthase 1-like
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pmrn01100
Metabolic pathways
Module
pmrn_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
116940966
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pmrn01003
]
116940966
Enzymes [BR:
pmrn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
116940966
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
116940966
Glycosyltransferases [BR:
pmrn01003
]
Glycan extension
O-Glycan
116940966
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
116940966
NCBI-ProteinID:
XP_032807322
UniProt:
A0AAJ7WRP0
LinkDB
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Position
1:complement(33147387..33234159)
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AA seq
900 aa
AA seq
DB search
MAVQRRRAWMSAALGLVLGFTAATWLVVPRSVSGNGRRRLGSGCQAHLAVGDAAGSAWRH
GSAGGDEGRGGGGRGWGGRLDPLGAPVRAVATPQNFLYVGVMTAHKYLETRGRAAFSTWV
RSVPGTVEFFSSWGSRTELPLPLVTLPGVDDAYPPQKKSFLMLKYMHDHHLDRYEWFMRA
DDDAYVRGERLEQFLRGLNSSEPHYLGQTGLGTAEELGKLALEPGENFCMGGPGMVFSRE
ALRRVGPHVGQCLRELHTSHEDVEIGRCVRRFAGTQCVWSYEMQQLFYENYEHHHKGYIH
DLHKSKMRAAITLHPNKQPAYQHRLHSQLLALRISELRQRTLQLHRDAALAAKLAAGEAA
AAAAAAGGGAASGAGGAAERPRREDRRLGAPPTFLRFTPPSRDQVLEWDFLTGRLQYSAA
DGAPPRRSLGMAMRLALDDIIMRVMEMINANSHARGRVIDYKELQYGYSRVNPVSGAEYV
LDLLLLYKKYAGKKMTVPVRRHAYLQQSFVRAESHEAEEIRDPEALALSIDRSAAANSKG
GSLIRGSLSIFSKPLKMFVPFRLFDRGGGNGGGGNGGDGGDGGDGEAAGPRQAEGKVHVL
VPLMGRLGIFKRFMDSFEHTCLRSGQNVKLLVLLFDEQPRTGPSPAAAAAAEAASGAAAS
SAGTSERHRDVLRRYQRRHPRAELEIRRMPGPFSRGVALEEGASLFSNDTLLLFCDVDLV
FTADFLHRCRANTVQGASAYFPIVYSEYNPRFARGEPGDEPPAAAEGDPSGHFALSRRGG
FWREYGYGITCIYRGDLAAAGGFDTSIRGWGLEDVDLFSRVLHARLAPFRSQEPGVVHVH
HPVACDPALPPHQLRMCLGSRASAYADGRQLAELWLRRRPGVARATAGAGEVLRNRTDVS
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggccgtacagaggcggcgggcgtggatgagcgcggcgctcggtctggtcttgggcttc
acggccgccacatggctggtggtgccgcgctccgtctccggcaacggcaggagacgtctc
gggagcggctgccaggcgcatctggccgtcggagacgcggccggctcggcgtggcgtcac
gggagcgcgggaggagacgaaggaagaggcggcggtggccgcggttggggagggcggctg
gaccccctgggtgccccggtgcgcgccgtggcgaccccgcaaaacttcctgtacgtgggg
gtgatgacggcgcacaagtacctggagacgcgcggtcgcgccgcgttcagcacgtgggtg
cgctccgtgccgggcaccgtggagttcttctcgagctggggctcgcgcaccgagctgccg
ctgccgctggtcacgctgcccggcgtggacgacgcgtacccgccgcaaaagaagtccttc
ctcatgctcaagtacatgcacgaccaccacctggaccgctacgagtggttcatgcgcgcg
gacgacgacgcttacgtgcgcggcgagcgcctggagcagttcctacgcggcctcaacagc
agcgagccgcactacctgggccagacggggctgggcacggccgaggagctgggcaagttg
gcgctcgagcccggggagaacttctgcatgggcgggccgggaatggttttcagccgcgag
gcgctgcggcgcgtggggccgcacgtgggccagtgcctccgcgagctgcacacctcgcac
gaggacgtggagatcggccgctgcgtgcgcaggttcgcgggcacgcagtgcgtgtggtcg
tacgagatgcagcagctgttctacgagaactacgagcaccaccacaagggctacatccac
gacctgcacaagagcaagatgcgcgccgccatcacgctgcaccccaacaagcagcccgcc
taccagcaccggctgcactcgcagctgctggcgctgcgcatctccgagctgcgccagcgc
acgctgcagctgcaccgtgacgcggcgctggccgcgaagctggcggcgggcgaggccgcc
gccgccgccgccgccgctggcggcggcgccgccagcggcgccggcggcgcggcggagcgg
ccgcggcgcgaggaccggcggctgggcgcgccgcccacgttcttgcggttcacgccgccg
tcgcgagaccaggtgctcgagtgggacttcttgacgggccgcctgcagtacagcgcggcg
gacggcgctccgccgcgccgctccctcggcatggccatgaggctggcgctcgacgacatc
atcatgagggtgatggagatgatcaacgccaactcgcacgcgcgcgggcgcgtcatcgac
tacaaggagctgcagtacggctactcccgcgtcaaccccgtgtccggcgccgagtacgtg
ctcgatctgctgctgctctacaagaagtacgccggcaagaagatgacggtgcccgtgcgg
cgccacgcctacctccagcagagcttcgtacgcgccgagtcccacgaggccgaggagatc
cgcgaccccgaggcgctcgcgctcagcatcgaccgctcagccgccgccaatagcaaaggc
ggctccttgatccggggttccctctccatcttttccaagccgctcaagatgttcgtgccg
tttcggttattcgaccggggcggcgggaacgggggcggcggtaacgggggcgatggcggc
gacggcggagacggagaggccgccgggccgcggcaggccgagggcaaagttcacgtgctg
gtgccgctcatgggacgcctcggcatcttcaagcgcttcatggacagcttcgagcacacg
tgcctgcgctcggggcagaacgtcaagctgctcgtgctcctcttcgacgaacagccgcgc
acggggccctcgccggccgcggcggcggcggccgaggcggcgtccggggcggcggccagc
tcggccggcacgtccgagcgccaccgggacgtcctgcgccggtaccagcggcgccacccg
cgggcggagttggagatccggcgcatgccgggccccttctcgcgcggcgtggcgctcgag
gagggcgcgtcgctcttctccaacgacacgctgctgctcttctgcgacgtcgacctcgtg
ttcacggccgacttcctgcaccgctgccgcgctaacaccgtgcagggcgcgtcggcctat
ttccccatcgtgtacagcgagtacaacccgcgctttgcccgcggcgagcccggcgacgag
ccaccagctgcggcggagggagacccgtcgggccacttcgctctgagccgcaggggcggt
ttctggcgcgagtacggctacggcatcacgtgcatctaccgcggcgacctggcggcggcg
ggcggcttcgacacgtcgatccgcggctggggcctggaagacgtggacctgttctcacgc
gtgctgcacgcgaggctggccccgttccgcagccaggagcccggcgtggtgcacgtgcac
cacccggtggcgtgcgaccccgcgctgccgccgcaccagctgcgcatgtgcctgggctcg
cgggcctccgcctacgcggacgggcgccagctcgccgagctgtggctgcggcggaggccc
ggcgtggcacgagcaacggccggcgctggggaggtgctccggaaccggacagacgtgtcg
tag
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